RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 PSMD2Q13200 908 aa13.52□□□□□ -0.24
RBFOX1-208ENST00000547372 SF3B2Q13435 895 aaKnown RBP13.52□□□□□ -0.24
RBFOX1-208ENST00000547372 HOOK1Q9UJC3 728 aaKnown RBP13.52□□□□□ -0.24
RBFOX1-208ENST00000547372 HPCAL4Q9UM19 191 aa13.52□□□□□ -0.24
RBFOX1-208ENST00000547372 KRT32Q14532 448 aa13.52□□□□□ -0.25
RBFOX1-208ENST00000547372 SPECC1LQ69YQ0 1117 aa13.52□□□□□ -0.25
RBFOX1-208ENST00000547372 ARMC2Q8NEN0 867 aa13.52□□□□□ -0.25
RBFOX1-208ENST00000547372 HDAC6Q9UBN7 1215 aa13.52□□□□□ -0.25
RBFOX1-208ENST00000547372 MROH1Q8NDA8 1641 aa13.52□□□□□ -0.25
RBFOX1-208ENST00000547372 TBC1D8BQ0IIM8 1120 aa13.52□□□□□ -0.25
RBFOX1-208ENST00000547372 ZNF827Q17R98 1081 aa13.52□□□□□ -0.25
RBFOX1-208ENST00000547372 TC2NQ8N9U0 490 aa13.52□□□□□ -0.25
RBFOX1-208ENST00000547372 TBC1D22AQ8WUA7 517 aa13.52□□□□□ -0.25
RBFOX1-208ENST00000547372 A0A0D9SFI3 127 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 NEXNQ0ZGT2 675 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 TRIM29Q14134 588 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 SPECC1Q5M775 1068 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 B4GALNT4Q76KP1 1039 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 SND1Q7KZF4 910 aaKnown RBP eCLIP13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 RALYLQ86SE5 291 aaKnown RBP13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 MSANTD4Q8NCY6 345 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 PARD3BQ8TEW8 1205 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 NAPGQ99747 312 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 SPTLC2O15270 562 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 MYBL1P10243 752 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 ARID4AP29374 1257 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 SYKP43405 635 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 IRX1P78414 480 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 PPFIA1Q13136 1202 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 ADALQ6DHV7 355 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 TMEM139Q8IV31 216 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 SH2D3CQ8N5H7 860 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 MICAL1Q8TDZ2 1067 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 KIF20BQ96Q89 1820 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 GOLGA6L7A0A1B0GV03 622 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 MEFVO15553 781 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 FBXO31Q5XUX0 539 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 NAA16Q6N069 864 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 CCDC129Q6ZRS4 1044 aa13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 DDX20Q9UHI6 824 aaKnown RBP13.51□□□□□ -0.25
RBFOX1-208ENST00000547372 ARHGEF10O15013 1369 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 GNAT3A8MTJ3 354 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 EIF3HO15372 352 aaKnown RBP eCLIP13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 HDGFP51858 240 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 HAND2P61296 217 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 TSR1Q2NL82 804 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 RAD9BQ6WBX8 426 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 DDX46Q7L014 1031 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 G3BP2Q9UN86 482 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 NFE2L3Q9Y4A8 694 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 PREX1Q8TCU6 1659 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 MYO1BO43795 1136 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 PFKFB2O60825 505 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 PRPF6O94906 941 aaKnown RBP13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 PFKFB1P16118 471 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 SNCBQ16143 134 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 NFXL1Q6ZNB6 911 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 KLHDC4Q8TBB5 520 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 PIK3R5Q8WYR1 880 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 MYO6Q9UM54 1294 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 CRB1P82279 1406 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 SEC24CP53992 1094 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 CCDC181Q5TID7 509 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 COG1Q8WTW3 980 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 BAIAP2L1Q9UHR4 511 aa13.5□□□□□ -0.25
RBFOX1-208ENST00000547372 HECW2Q9P2P5 1572 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 AKR1B15C9JRZ8 316 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 KIF3CO14782 793 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 ERCC3P19447 782 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 STX17P56962 302 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 PREPLQ4J6C6 727 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 ZNF589Q86UQ0 364 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 CCDC82Q8N4S0 544 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 RASSF8Q8NHQ8 419 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 STAG1Q8WVM7 1258 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 ALDH8A1Q9H2A2 487 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 HMG20BQ9P0W2 317 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 IKBKBO14920 756 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 C21orf2O43822 256 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 MYL6BP14649 208 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 CRYMQ14894 314 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 ZKSCAN8Q15776 578 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 SELENOOQ9BVL4 669 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 CHPF2Q9P2E5 772 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 ADGRG1Q9Y653 693 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 FRMPD1Q5SYB0 1578 aa13.49□□□□□ -0.25
RBFOX1-208ENST00000547372 TULP1O00294 542 aaPredicted RBP13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 CHGBP05060 677 aa13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 ATL3Q6DD88 541 aa13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 SLF1Q9BQI6 1058 aa13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 USP42Q9H9J4 1324 aaKnown RBP13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 COBLO75128 1261 aa13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 ARHGAP25P42331 645 aa13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 GUCY1A3Q02108 690 aa13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 CWF19L2Q2TBE0 894 aaKnown RBP13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 ZNF483Q8TF39 744 aaPredicted RBP13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
RBFOX1-208ENST00000547372 YIPF3Q9GZM5 350 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms