RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 USP44Q9H0E7 712 aa11.95□□□□□ -0.5
C2CD3-220ENST00000544293 TMOD2Q9NZR1 351 aa11.95□□□□□ -0.5
C2CD3-220ENST00000544293 NR2E3Q9Y5X4 410 aa11.95□□□□□ -0.5
C2CD3-220ENST00000544293 ZHX2Q9Y6X8 837 aa11.95□□□□□ -0.5
C2CD3-220ENST00000544293 COL6A3P12111 3177 aa11.95□□□□□ -0.5
C2CD3-220ENST00000544293 ECM29Q5VYK3 1845 aa11.95□□□□□ -0.5
C2CD3-220ENST00000544293 A0A1B0GUL6 1792 aa11.95□□□□□ -0.5
C2CD3-220ENST00000544293 KIF16BQ96L93 1317 aa11.94□□□□□ -0.5
C2CD3-220ENST00000544293 A0A1W2PPC1 479 aa11.94□□□□□ -0.5
C2CD3-220ENST00000544293 FRAT2O75474 233 aaPredicted RBP11.94□□□□□ -0.5
C2CD3-220ENST00000544293 INHAP05111 366 aa11.94□□□□□ -0.5
C2CD3-220ENST00000544293 UBXN2AP68543 259 aa11.94□□□□□ -0.5
C2CD3-220ENST00000544293 IRF5Q13568 498 aa11.94□□□□□ -0.5
C2CD3-220ENST00000544293 PXYLP1Q8TE99 480 aa11.94□□□□□ -0.5
C2CD3-220ENST00000544293 PAWRQ96IZ0 340 aaKnown RBP11.94□□□□□ -0.5
C2CD3-220ENST00000544293 DEFB118Q96PH6 123 aa11.94□□□□□ -0.5
C2CD3-220ENST00000544293 PARK7Q99497 189 aaKnown RBP11.94□□□□□ -0.5
C2CD3-220ENST00000544293 USP40Q9NVE5 1235 aa11.94□□□□□ -0.5
C2CD3-220ENST00000544293 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.94□□□□□ -0.5
C2CD3-220ENST00000544293 BIN2Q9UBW5 565 aaPredicted RBP11.94□□□□□ -0.5
C2CD3-220ENST00000544293 ABCB7O75027 752 aa11.93□□□□□ -0.5
C2CD3-220ENST00000544293 CCDC84Q86UT8 332 aaPredicted RBP11.93□□□□□ -0.5
C2CD3-220ENST00000544293 SCYL3Q8IZE3 742 aa11.93□□□□□ -0.5
C2CD3-220ENST00000544293 GJD2Q9UKL4 321 aa11.93□□□□□ -0.5
C2CD3-220ENST00000544293 MAST3O60307 1309 aa11.92□□□□□ -0.5
C2CD3-220ENST00000544293 ARAP2Q8WZ64 1704 aa11.92□□□□□ -0.5
C2CD3-220ENST00000544293 DDTLA6NHG4 134 aaPredicted RBP11.92□□□□□ -0.5
C2CD3-220ENST00000544293 EYA2O00167 538 aa11.92□□□□□ -0.5
C2CD3-220ENST00000544293 EVI5O60447 810 aa11.92□□□□□ -0.5
C2CD3-220ENST00000544293 TFRCP02786 760 aaKnown RBP11.92□□□□□ -0.5
C2CD3-220ENST00000544293 BMP8BP34820 402 aa11.92□□□□□ -0.5
C2CD3-220ENST00000544293 PUM3Q15397 648 aaKnown RBP11.92□□□□□ -0.5
C2CD3-220ENST00000544293 MRPL50Q8N5N7 158 aaKnown RBP11.92□□□□□ -0.5
C2CD3-220ENST00000544293 WDR66Q8TBY9 1149 aa11.92□□□□□ -0.5
C2CD3-220ENST00000544293 IDI2Q9BXS1 227 aa11.92□□□□□ -0.5
C2CD3-220ENST00000544293 DDX4Q9NQI0 724 aaKnown RBP11.92□□□□□ -0.5
C2CD3-220ENST00000544293 SLC45A1Q9Y2W3 748 aa11.92□□□□□ -0.5
C2CD3-220ENST00000544293 IFIT1P09914 478 aaKnown RBP11.91□□□□□ -0.5
C2CD3-220ENST00000544293 TRIM32Q13049 653 aa11.91□□□□□ -0.5
C2CD3-220ENST00000544293 RRP1BQ14684 758 aaKnown RBP11.91□□□□□ -0.5
C2CD3-220ENST00000544293 TREML2Q5T2D2 321 aa11.91□□□□□ -0.5
C2CD3-220ENST00000544293 Q7L0L9 218 aa11.91□□□□□ -0.5
C2CD3-220ENST00000544293 FASTKD5Q7L8L6 764 aaKnown RBP11.91□□□□□ -0.5
C2CD3-220ENST00000544293 LPIN2Q92539 896 aa11.91□□□□□ -0.5
C2CD3-220ENST00000544293 RFX7Q2KHR2 1363 aa11.91□□□□□ -0.5
C2CD3-220ENST00000544293 DSG3P32926 999 aa11.9□□□□□ -0.5
C2CD3-220ENST00000544293 RGS3P49796 1198 aa11.9□□□□□ -0.5
C2CD3-220ENST00000544293 ANKRD13CQ8N6S4 541 aa11.9□□□□□ -0.5
C2CD3-220ENST00000544293 ZNF384Q8TF68 577 aa11.9□□□□□ -0.5
C2CD3-220ENST00000544293 GAKO14976 1311 aa11.89□□□□□ -0.51
C2CD3-220ENST00000544293 SALL1Q9NSC2 1324 aa11.89□□□□□ -0.51
C2CD3-220ENST00000544293 TNPO2O14787 897 aaKnown RBP11.89□□□□□ -0.51
C2CD3-220ENST00000544293 ENTPD3O75355 529 aa11.89□□□□□ -0.51
C2CD3-220ENST00000544293 PHKA1P46020 1223 aa11.89□□□□□ -0.51
C2CD3-220ENST00000544293 GADL1Q6ZQY3 521 aa11.89□□□□□ -0.51
C2CD3-220ENST00000544293 ZMYND8Q9ULU4 1186 aaPredicted RBP11.89□□□□□ -0.51
C2CD3-220ENST00000544293 CUL9Q8IWT3 2517 aa11.89□□□□□ -0.51
C2CD3-220ENST00000544293 ZNF521Q96K83 1311 aa11.88□□□□□ -0.51
C2CD3-220ENST00000544293 TRIM75PA6NK02 468 aa11.88□□□□□ -0.51
C2CD3-220ENST00000544293 PEX10O60683 326 aa11.88□□□□□ -0.51
C2CD3-220ENST00000544293 CTNND1O60716 968 aaKnown RBP11.88□□□□□ -0.51
C2CD3-220ENST00000544293 SLC5A1P13866 664 aa11.88□□□□□ -0.51
C2CD3-220ENST00000544293 CAPN2P17655 700 aa11.88□□□□□ -0.51
C2CD3-220ENST00000544293 ADORA1P30542 326 aa11.88□□□□□ -0.51
C2CD3-220ENST00000544293 RHBDL3P58872 404 aa11.88□□□□□ -0.51
C2CD3-220ENST00000544293 LRIT3Q3SXY7 679 aa11.88□□□□□ -0.51
C2CD3-220ENST00000544293 GPR153Q6NV75 609 aa11.88□□□□□ -0.51
C2CD3-220ENST00000544293 POTEEQ6S8J3 1075 aa11.88□□□□□ -0.51
C2CD3-220ENST00000544293 FAM163AQ96GL9 167 aaPredicted RBP11.88□□□□□ -0.51
C2CD3-220ENST00000544293 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.88□□□□□ -0.51
C2CD3-220ENST00000544293 MTMR10Q9NXD2 777 aa11.88□□□□□ -0.51
C2CD3-220ENST00000544293 AGTPBP1Q9UPW5 1226 aa11.88□□□□□ -0.51
C2CD3-220ENST00000544293 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.88□□□□□ -0.51
C2CD3-220ENST00000544293 LDHBP07195 334 aaKnown RBP11.87□□□□□ -0.51
C2CD3-220ENST00000544293 SYN1P17600 705 aa11.87□□□□□ -0.51
C2CD3-220ENST00000544293 NECAB2Q7Z6G3 386 aa11.87□□□□□ -0.51
C2CD3-220ENST00000544293 DEFB123Q8N688 67 aa11.87□□□□□ -0.51
C2CD3-220ENST00000544293 FAM196BA6NMK8 535 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 TBC1D12O60347 775 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 MAGEA10P43363 369 aaPredicted RBP11.86□□□□□ -0.51
C2CD3-220ENST00000544293 JAG1P78504 1218 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 FAM110CQ1W6H9 321 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 MAP3K21Q5TCX8 1036 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 C7orf61Q8IZ16 206 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 SSH1Q8WYL5 1049 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 MRS2Q9HD23 443 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 PICK1Q9NRD5 415 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 OGDHLQ9ULD0 1010 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 STXBP5LQ9Y2K9 1186 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 PFASO15067 1338 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 RPTORQ8N122 1335 aa11.86□□□□□ -0.51
C2CD3-220ENST00000544293 COL6A1P12109 1028 aa11.85□□□□□ -0.51
C2CD3-220ENST00000544293 SPP2Q13103 211 aa11.85□□□□□ -0.51
C2CD3-220ENST00000544293 RASGRF1Q13972 1273 aa11.85□□□□□ -0.51
C2CD3-220ENST00000544293 ATP2B3Q16720 1220 aa11.85□□□□□ -0.51
C2CD3-220ENST00000544293 CCDC102BQ68D86 513 aa11.85□□□□□ -0.51
C2CD3-220ENST00000544293 ANKLE1Q8NAG6 615 aa11.85□□□□□ -0.51
C2CD3-220ENST00000544293 SMCR8Q8TEV9 937 aaPredicted RBP11.85□□□□□ -0.51
C2CD3-220ENST00000544293 TRIB2Q92519 343 aa11.85□□□□□ -0.51
C2CD3-220ENST00000544293 COA7Q96BR5 231 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms