RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 SERTAD1Q9UHV2 236 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 TUBE1Q9UJT0 475 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 GOLGA8AA7E2F4 631 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 PRKAB2O43741 272 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 DHX16O60231 1041 aaKnown RBP11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 ZRANB2O95218 330 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 CDK11BP21127 795 aaKnown RBP11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 PHKA1P46020 1223 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 WWC2Q6AWC2 1192 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 SUGCTQ9HAC7 445 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 PUF60Q9UHX1 559 aaKnown RBP11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 GOLGB1Q14789 3259 aaKnown RBP11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 SH2B2O14492 632 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 TOB1P50616 345 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 TRDNQ13061 729 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 KRBA2Q6ZNG9 492 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 BBXQ8WY36 941 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 SMARCE1Q969G3 411 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 TEX13AQ9BXU3 409 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 KCND1Q9NSA2 647 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 TMEM51Q9NW97 253 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 MAN1B1Q9UKM7 699 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 PCDHB6Q9Y5E3 794 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 ZNF532Q9HCE3 1301 aa11.91□□□□□ -0.5
CDC42SE1-207ENST00000540998 KIF2AO00139 706 aaPredicted RBP11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 TBC1D8O95759 1140 aa11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 RESP18Q5W5W9 173 aa11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 CREBRFQ8IUR6 639 aa11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 TC2NQ8N9U0 490 aa11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 BAG1Q99933 345 aaPredicted RBP11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 ZMYM6O95789 1325 aa11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 IKBKBO14920 756 aa11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 IARSP41252 1262 aaKnown RBP11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 AFMP43652 599 aa11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 HLFQ16534 295 aa11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 NOM1Q5C9Z4 860 aaKnown RBP11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 TMEM67Q5HYA8 995 aa11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 OLFM4Q6UX06 510 aa11.9□□□□□ -0.5
CDC42SE1-207ENST00000540998 ZBTB43O43298 467 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 OAS2P29728 719 aaKnown RBP11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 NTRK3Q16288 839 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 CCDC102BQ68D86 513 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 LDHAL6AQ6ZMR3 332 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 IQSEC3Q9UPP2 1182 aaPredicted RBP11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 WNT7AO00755 349 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 NRDCO43847 1150 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 CAPN2P17655 700 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 PPP2R3AQ06190 1150 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 EPB41L4AQ9HCS5 686 aaPredicted RBP11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 GPR108Q9NPR9 543 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 ZSWIM5Q9P217 1185 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 TJP1Q07157 1748 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 GTF2E1P29083 439 aaPredicted RBP11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 CASQ1P31415 396 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 CYP2C19P33261 490 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 CCDC191Q8NCU4 936 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 NUP133Q8WUM0 1156 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 ARMT1Q9H993 441 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 LY9Q9HBG7 655 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 PHLPP2Q6ZVD8 1323 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 CPDO75976 1380 aa11.89□□□□□ -0.51
CDC42SE1-207ENST00000540998 PHRF1Q9P1Y6 1649 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 ADAMTS7Q9UKP4 1686 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 A0A087X0B3 334 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 CDC25AP30304 524 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 ADD2P35612 726 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 IFIT5Q13325 482 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 DIS3L2Q8IYB7 885 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 IGDCC4Q8TDY8 1250 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 CCDC12Q8WUD4 166 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 PARD6BQ9BYG5 372 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 CNNM1Q9NRU3 951 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 RNF216Q9NWF9 866 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 IFIT3O14879 490 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 PRDM1O75626 825 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 C4AP0C0L4 1744 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 C4BP0C0L5 1744 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 GLI3P10071 1580 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 ITGA6P23229 1130 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 LRRFIP1Q32MZ4 808 aaKnown RBP11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 CC2D1AQ6P1N0 951 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 C19orf44Q9H6X5 657 aa11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE1-207ENST00000540998 H3BQF6 201 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 POSTNQ15063 836 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 EARS2Q5JPH6 523 aaKnown RBP11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 TOM1L2Q6ZVM7 507 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 DNAJC10Q8IXB1 793 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 MIGA1Q8NAN2 632 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 KIFC2Q96AC6 838 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 SHISA4Q96DD7 197 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 EPSTI1Q96J88 318 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 STRN4Q9NRL3 753 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 PDE6AP16499 860 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 MDM2Q00987 491 aaPredicted RBP11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 TRIM29Q14134 588 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 RAD9BQ6WBX8 426 aa11.87□□□□□ -0.51
CDC42SE1-207ENST00000540998 ASAP1Q9ULH1 1129 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms