RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 DOCK1Q14185 1865 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 COL2A1P02458 1487 aaPredicted RBP8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 GPR75-ASB3A0A0A6YYF3 556 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 PDE4AP27815 886 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 BTDP43251 543 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 MAP3K12Q12852 859 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 ERICH6BQ5W0A0 696 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 NAA16Q6N069 864 aaPredicted RBP8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 CDC42EP5Q6NZY7 148 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 TMED8Q6PL24 325 aaPredicted RBP8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 DLK2Q6UY11 383 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 CENPQQ7L2Z9 268 aaPredicted RBP8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 USP48Q86UV5 1035 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 PLEKHM2Q8IWE5 1019 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 MAGEB6Q8N7X4 407 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 KIF12Q96FN5 646 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 OSBPL3Q9H4L5 887 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 VEZTQ9HBM0 779 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 PPP2R3BQ9Y5P8 575 aa8.47□□□□□ -1.05
LPCAT3-209ENST00000540060 LAMA4Q16363 1823 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 TCRBV5S4A2TA0A5A2 114 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 LDHCP07864 332 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 PDE6AP16499 860 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 MNX1P50219 401 aaPredicted RBP8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 APLP1P51693 650 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 CACNB3P54284 484 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 RHBDL3P58872 404 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 TNFAIP1Q13829 316 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 FKBP1CQ5VVH2 108 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 KBTBD3Q8NAB2 608 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 CDCA5Q96FF9 252 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 CCDC136Q96JN2 1154 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 TMOD2Q9NZR1 351 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 ZNF532Q9HCE3 1301 aa8.46□□□□□ -1.06
LPCAT3-209ENST00000540060 PCNTO95613 3336 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 TCP10L2B9ZVM9 353 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 WDHD1O75717 1129 aaPredicted RBP8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 MAP4K4O95819 1239 aaPredicted RBP8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 CHGBP05060 677 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 HSPA6P17066 643 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 CYP7A1P22680 504 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 ADD2P35612 726 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 NFIAQ12857 509 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 RASA3Q14644 834 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 SLC9C2Q5TAH2 1124 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 CST9Q5W186 159 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 FAM83AQ86UY5 434 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 TEPSINQ96N21 525 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 RIOK1Q9BRS2 568 aaKnown RBP8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 IDI2Q9BXS1 227 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 DEFB129Q9H1M3 183 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 USP40Q9NVE5 1235 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 AATFQ9NY61 560 aaKnown RBP eCLIP8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 FAM198AQ9UFP1 575 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 ATRNL1Q5VV63 1379 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 PHIPQ8WWQ0 1821 aa8.45□□□□□ -1.06
LPCAT3-209ENST00000540060 TMEM88BA6NKF7 163 aa8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 CELF2O95319 508 aaKnown RBP8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 BAG3O95817 575 aa8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 TNNI2P48788 182 aa8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 PPP4CP60510 307 aa8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 DYNLL1P63167 89 aaKnown RBP8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 UBE3CQ15386 1083 aa8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 SLFNL1Q499Z3 407 aa8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 PRAMEF18Q5VWM3 479 aa8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 CERS3Q8IU89 383 aa8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 MIGA1Q8NAN2 632 aa8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 SH3RF3Q8TEJ3 882 aaPredicted RBP8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 NOL10Q9BSC4 688 aaKnown RBP8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 TMEM39BQ9GZU3 492 aa8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 ZNF408Q9H9D4 720 aa8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 DDX4Q9NQI0 724 aaKnown RBP8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 PPP4R2Q9NY27 417 aa8.44□□□□□ -1.06
LPCAT3-209ENST00000540060 PTPRFP10586 1907 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 ENTPD3O75355 529 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 GSPT1P15170 499 aaKnown RBP8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 PLCG2P16885 1265 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 RGS3P49796 1198 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 PICALMQ13492 652 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 TTC22Q5TAA0 569 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 ZSCAN25Q6NSZ9 544 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 TEX11Q8IYF3 940 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 LCORLQ8N3X6 602 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 FAM151AQ8WW52 585 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 EVI5LQ96CN4 794 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 FSD1Q9BTV5 496 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 FLT1P17948 1338 aa8.43□□□□□ -1.06
LPCAT3-209ENST00000540060 MAGEB6P1A0A0J9YX57 407 aa8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 RNF113AO15541 343 aaKnown RBP8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 MBD4O95243 580 aa8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 ZFYP08048 801 aaPredicted RBP8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 NF2P35240 595 aa8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 FKBP1BP68106 108 aa8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 HTRA3P83110 453 aa8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 TCP10Q12799 353 aa8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 NBPF12Q5TAG4 269 aaPredicted RBP8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 SH3BP5LQ7L8J4 393 aa8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 SKAP1Q86WV1 359 aa8.42□□□□□ -1.06
LPCAT3-209ENST00000540060 ZFPM1Q8IX07 1006 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms