RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 GADD45BO75293 160 aaPredicted RBP26.33■■□□□ 1.8
HOMER3-204ENST00000539827 RXRAP19793 462 aa26.33■■□□□ 1.8
HOMER3-204ENST00000539827 BAG6P46379 1132 aa26.33■■□□□ 1.8
HOMER3-204ENST00000539827 EVX2Q03828 476 aa26.33■■□□□ 1.8
HOMER3-204ENST00000539827 KIAA1551Q9HCM1 1747 aa26.32■■□□□ 1.8
HOMER3-204ENST00000539827 H0YIN7 160 aa26.32■■□□□ 1.8
HOMER3-204ENST00000539827 FAM173BQ6P4H8 233 aa26.32■■□□□ 1.8
HOMER3-204ENST00000539827 PDGFDQ9GZP0 370 aaPredicted RBP26.32■■□□□ 1.8
HOMER3-204ENST00000539827 ATP8A2Q9NTI2 1148 aa26.32■■□□□ 1.8
HOMER3-204ENST00000539827 FIBPO43427 364 aa26.31■■□□□ 1.8
HOMER3-204ENST00000539827 IGSF3O75054 1194 aa26.31■■□□□ 1.8
HOMER3-204ENST00000539827 FDPSP14324 419 aaKnown RBP26.31■■□□□ 1.8
HOMER3-204ENST00000539827 CAVIN1Q6NZI2 390 aaKnown RBP26.31■■□□□ 1.8
HOMER3-204ENST00000539827 APOA5Q6Q788 366 aa26.31■■□□□ 1.8
HOMER3-204ENST00000539827 SH3RF3Q8TEJ3 882 aaPredicted RBP26.31■■□□□ 1.8
HOMER3-204ENST00000539827 TMX4Q9H1E5 349 aaPredicted RBP26.31■■□□□ 1.8
HOMER3-204ENST00000539827 DUOX1Q9NRD9 1551 aa26.31■■□□□ 1.8
HOMER3-204ENST00000539827 DHX16O60231 1041 aaKnown RBP26.31■■□□□ 1.8
HOMER3-204ENST00000539827 LDHCP07864 332 aa26.31■■□□□ 1.8
HOMER3-204ENST00000539827 CYP2D6P10635 497 aa26.31■■□□□ 1.8
HOMER3-204ENST00000539827 CHRNA5P30532 468 aa26.31■■□□□ 1.8
HOMER3-204ENST00000539827 METAP2P50579 478 aaKnown RBP eCLIP26.31■■□□□ 1.8
HOMER3-204ENST00000539827 MFSD14BQ5SR56 506 aa26.31■■□□□ 1.8
HOMER3-204ENST00000539827 ZC3H12CQ9C0D7 883 aaKnown RBP26.31■■□□□ 1.8
HOMER3-204ENST00000539827 RBM27Q9P2N5 1060 aaKnown RBP26.31■■□□□ 1.8
HOMER3-204ENST00000539827 KIF3AQ9Y496 699 aa26.31■■□□□ 1.8
HOMER3-204ENST00000539827 CPLX1O14810 134 aa26.3■■□□□ 1.8
HOMER3-204ENST00000539827 LIFRP42702 1097 aa26.3■■□□□ 1.8
HOMER3-204ENST00000539827 GTF2IP78347 998 aa26.3■■□□□ 1.8
HOMER3-204ENST00000539827 CCDC144CPQ8IYA2 1237 aa26.3■■□□□ 1.8
HOMER3-204ENST00000539827 TMEM87AQ8NBN3 555 aa26.3■■□□□ 1.8
HOMER3-204ENST00000539827 FBXW7Q969H0 707 aa26.3■■□□□ 1.8
HOMER3-204ENST00000539827 MYL10Q9BUA6 226 aa26.3■■□□□ 1.8
HOMER3-204ENST00000539827 COA1Q9GZY4 146 aa26.3■■□□□ 1.8
HOMER3-204ENST00000539827 MROH7-TTC4A0A0A0MT08 1334 aa26.3■■□□□ 1.8
HOMER3-204ENST00000539827 CCDC69A6NI79 296 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 DOK7Q18PE1 504 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 STYK1Q6J9G0 422 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 SGMS1Q86VZ5 419 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 MICU3Q86XE3 530 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 ZNF219Q9P2Y4 722 aaPredicted RBP26.29■■□□□ 1.8
HOMER3-204ENST00000539827 MYH2Q9UKX2 1941 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 QSER1Q2KHR3 1735 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 ZBTB43O43298 467 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 PRDM1O75626 825 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 USP5P45974 858 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 RESTQ13127 1097 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 WTAPQ15007 396 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 ESR2Q92731 530 aa26.29■■□□□ 1.8
HOMER3-204ENST00000539827 NOL10Q9BSC4 688 aaKnown RBP26.29■■□□□ 1.8
HOMER3-204ENST00000539827 FAM205AQ6ZU69 1335 aa26.28■■□□□ 1.8
HOMER3-204ENST00000539827 BAG3O95817 575 aa26.28■■□□□ 1.8
HOMER3-204ENST00000539827 ADD1P35611 737 aaKnown RBP26.28■■□□□ 1.8
HOMER3-204ENST00000539827 TPRNQ4KMQ1 711 aa26.28■■□□□ 1.8
HOMER3-204ENST00000539827 CDC27P30260 824 aa26.27■■□□□ 1.8
HOMER3-204ENST00000539827 PPP4CP60510 307 aa26.27■■□□□ 1.8
HOMER3-204ENST00000539827 GUCY1B3Q02153 619 aa26.27■■□□□ 1.8
HOMER3-204ENST00000539827 SART3Q15020 963 aaKnown RBP26.27■■□□□ 1.8
HOMER3-204ENST00000539827 SLC4A8Q2Y0W8 1093 aa26.27■■□□□ 1.8
HOMER3-204ENST00000539827 TBC1D22AQ8WUA7 517 aa26.27■■□□□ 1.8
HOMER3-204ENST00000539827 RTFDC1Q9BY42 306 aaPredicted RBP26.27■■□□□ 1.8
HOMER3-204ENST00000539827 MCM9Q9NXL9 1143 aa26.27■■□□□ 1.8
HOMER3-204ENST00000539827 ORC3Q9UBD5 711 aaPredicted RBP26.27■■□□□ 1.8
HOMER3-204ENST00000539827 SLC12A7Q9Y666 1083 aa26.27■■□□□ 1.8
HOMER3-204ENST00000539827 ERICH2A1L162 156 aa26.27■■□□□ 1.8
HOMER3-204ENST00000539827 GOLGA8AA7E2F4 631 aa26.27■■□□□ 1.8
HOMER3-204ENST00000539827 MBD3O95983 291 aa26.27■■□□□ 1.8
HOMER3-204ENST00000539827 USP17L8P0C7I0 530 aa26.27■■□□□ 1.8
HOMER3-204ENST00000539827 ARPP21Q9UBL0 812 aaPredicted RBP26.27■■□□□ 1.8
HOMER3-204ENST00000539827 RANBP6O60518 1105 aaKnown RBP26.26■■□□□ 1.79
HOMER3-204ENST00000539827 BTDP43251 543 aa26.26■■□□□ 1.79
HOMER3-204ENST00000539827 SBK1Q52WX2 424 aa26.26■■□□□ 1.79
HOMER3-204ENST00000539827 UBAC1Q9BSL1 405 aa26.26■■□□□ 1.79
HOMER3-204ENST00000539827 LAMB1P07942 1786 aa26.25■■□□□ 1.79
HOMER3-204ENST00000539827 FGRP09769 529 aa26.25■■□□□ 1.79
HOMER3-204ENST00000539827 SYNE3Q6ZMZ3 975 aa26.25■■□□□ 1.79
HOMER3-204ENST00000539827 TGFBRAP1Q8WUH2 860 aa26.25■■□□□ 1.79
HOMER3-204ENST00000539827 MTA3Q9BTC8 594 aa26.25■■□□□ 1.79
HOMER3-204ENST00000539827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.25■■□□□ 1.79
HOMER3-204ENST00000539827 SLX4Q8IY92 1834 aa26.24■■□□□ 1.79
HOMER3-204ENST00000539827 GOLGA6L3A6NEY3 463 aa26.24■■□□□ 1.79
HOMER3-204ENST00000539827 G3V3G9 751 aa26.24■■□□□ 1.79
HOMER3-204ENST00000539827 KRT85P78386 507 aa26.24■■□□□ 1.79
HOMER3-204ENST00000539827 DCAF8Q5TAQ9 597 aa26.24■■□□□ 1.79
HOMER3-204ENST00000539827 FAM217BQ9NTX9 383 aaPredicted RBP26.24■■□□□ 1.79
HOMER3-204ENST00000539827 MKRN1Q9UHC7 482 aaKnown RBP26.24■■□□□ 1.79
HOMER3-204ENST00000539827 OTUD7BQ6GQQ9 843 aa26.24■■□□□ 1.79
HOMER3-204ENST00000539827 EYA3Q99504 573 aa26.24■■□□□ 1.79
HOMER3-204ENST00000539827 TFIP11Q9UBB9 837 aaKnown RBP26.24■■□□□ 1.79
HOMER3-204ENST00000539827 TNKSO95271 1327 aa26.23■■□□□ 1.79
HOMER3-204ENST00000539827 GPR75-ASB3A0A0A6YYF3 556 aa26.23■■□□□ 1.79
HOMER3-204ENST00000539827 MXD3Q9BW11 206 aa26.23■■□□□ 1.79
HOMER3-204ENST00000539827 ZSCAN16Q9H4T2 348 aaPredicted RBP26.23■■□□□ 1.79
HOMER3-204ENST00000539827 TMEM63CQ9P1W3 806 aa26.23■■□□□ 1.79
HOMER3-204ENST00000539827 FSD2A1L4K1 749 aa26.22■■□□□ 1.79
HOMER3-204ENST00000539827 SLC3A2P08195 630 aaKnown RBP26.22■■□□□ 1.79
HOMER3-204ENST00000539827 PCP11498 1178 aaKnown RBP26.22■■□□□ 1.79
HOMER3-204ENST00000539827 SEC23AQ15436 765 aa26.22■■□□□ 1.79
HOMER3-204ENST00000539827 CSPP1Q1MSJ5 1256 aa26.22■■□□□ 1.79
HOMER3-204ENST00000539827 MAPKAPK5Q8IW41 473 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms