RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 ZHX2Q9Y6X8 837 aa18.34■□□□□ 0.53
CCDC144NL-202ENST00000539177 DDX60LQ5H9U9 1706 aaKnown RBP18.34■□□□□ 0.53
CCDC144NL-202ENST00000539177 A0A0G2JLL6 359 aaPredicted RBP18.33■□□□□ 0.52
CCDC144NL-202ENST00000539177 SLURP2P0DP57 97 aa18.33■□□□□ 0.52
CCDC144NL-202ENST00000539177 PRRT2Q7Z6L0 340 aaPredicted RBP18.33■□□□□ 0.52
CCDC144NL-202ENST00000539177 SCYL3Q8IZE3 742 aa18.33■□□□□ 0.52
CCDC144NL-202ENST00000539177 PICK1Q9NRD5 415 aa18.33■□□□□ 0.52
CCDC144NL-202ENST00000539177 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.33■□□□□ 0.52
CCDC144NL-202ENST00000539177 ATRNL1Q5VV63 1379 aa18.32■□□□□ 0.52
CCDC144NL-202ENST00000539177 A0A1W2PPC1 479 aa18.32■□□□□ 0.52
CCDC144NL-202ENST00000539177 FASTKD5Q7L8L6 764 aaKnown RBP18.32■□□□□ 0.52
CCDC144NL-202ENST00000539177 SMCR8Q8TEV9 937 aaPredicted RBP18.32■□□□□ 0.52
CCDC144NL-202ENST00000539177 DIS3LQ8TF46 1054 aaKnown RBP18.32■□□□□ 0.52
CCDC144NL-202ENST00000539177 LOC285556D6RIA3 1793 aa18.32■□□□□ 0.52
CCDC144NL-202ENST00000539177 PHF20L1A8MW92 1017 aa18.31■□□□□ 0.52
CCDC144NL-202ENST00000539177 LDHBP07195 334 aaKnown RBP18.31■□□□□ 0.52
CCDC144NL-202ENST00000539177 PTPRAP18433 802 aa18.31■□□□□ 0.52
CCDC144NL-202ENST00000539177 RGS3P49796 1198 aa18.31■□□□□ 0.52
CCDC144NL-202ENST00000539177 CCDC84Q86UT8 332 aaPredicted RBP18.31■□□□□ 0.52
CCDC144NL-202ENST00000539177 ZSCAN29Q8IWY8 852 aaPredicted RBP18.31■□□□□ 0.52
CCDC144NL-202ENST00000539177 LPIN2Q92539 896 aa18.31■□□□□ 0.52
CCDC144NL-202ENST00000539177 PAWRQ96IZ0 340 aaKnown RBP18.31■□□□□ 0.52
CCDC144NL-202ENST00000539177 COL6A3P12111 3177 aa18.3■□□□□ 0.52
CCDC144NL-202ENST00000539177 EYA2O00167 538 aa18.3■□□□□ 0.52
CCDC144NL-202ENST00000539177 C7orf61Q8IZ16 206 aa18.3■□□□□ 0.52
CCDC144NL-202ENST00000539177 ANKRD13CQ8N6S4 541 aa18.3■□□□□ 0.52
CCDC144NL-202ENST00000539177 PXYLP1Q8TE99 480 aa18.3■□□□□ 0.52
CCDC144NL-202ENST00000539177 PAK6Q9NQU5 681 aaPredicted RBP18.3■□□□□ 0.52
CCDC144NL-202ENST00000539177 AFG3L2Q9Y4W6 797 aa18.3■□□□□ 0.52
CCDC144NL-202ENST00000539177 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
CCDC144NL-202ENST00000539177 TRIM75PA6NK02 468 aa18.29■□□□□ 0.52
CCDC144NL-202ENST00000539177 IRF5Q13568 498 aa18.29■□□□□ 0.52
CCDC144NL-202ENST00000539177 SH3BP5LQ7L8J4 393 aa18.29■□□□□ 0.52
CCDC144NL-202ENST00000539177 ZMYND8Q9ULU4 1186 aaPredicted RBP18.29■□□□□ 0.52
CCDC144NL-202ENST00000539177 LRRFIP2Q9Y608 721 aaKnown RBP18.29■□□□□ 0.52
CCDC144NL-202ENST00000539177 LAMA3Q16787 3333 aa18.28■□□□□ 0.52
CCDC144NL-202ENST00000539177 RFX5P48382 616 aaPredicted RBP18.28■□□□□ 0.52
CCDC144NL-202ENST00000539177 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.28■□□□□ 0.52
CCDC144NL-202ENST00000539177 SIL1Q9H173 461 aa18.28■□□□□ 0.52
CCDC144NL-202ENST00000539177 DDTLA6NHG4 134 aaPredicted RBP18.27■□□□□ 0.52
CCDC144NL-202ENST00000539177 PICALMQ13492 652 aa18.27■□□□□ 0.52
CCDC144NL-202ENST00000539177 ATP2B3Q16720 1220 aa18.27■□□□□ 0.52
CCDC144NL-202ENST00000539177 ATG9AQ7Z3C6 839 aa18.27■□□□□ 0.52
CCDC144NL-202ENST00000539177 NECAB2Q7Z6G3 386 aa18.27■□□□□ 0.52
CCDC144NL-202ENST00000539177 MRPL50Q8N5N7 158 aaKnown RBP18.27■□□□□ 0.52
CCDC144NL-202ENST00000539177 COA7Q96BR5 231 aa18.27■□□□□ 0.52
CCDC144NL-202ENST00000539177 CRISPLD2Q9H0B8 497 aa18.27■□□□□ 0.52
CCDC144NL-202ENST00000539177 USP44Q9H0E7 712 aa18.27■□□□□ 0.52
CCDC144NL-202ENST00000539177 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.52
CCDC144NL-202ENST00000539177 RFX7Q2KHR2 1363 aa18.27■□□□□ 0.51
CCDC144NL-202ENST00000539177 PHKA1P46020 1223 aa18.26■□□□□ 0.51
CCDC144NL-202ENST00000539177 TREML2Q5T2D2 321 aa18.26■□□□□ 0.51
CCDC144NL-202ENST00000539177 Q7L0L9 218 aa18.26■□□□□ 0.51
CCDC144NL-202ENST00000539177 GNL3LQ9NVN8 582 aaKnown RBP18.26■□□□□ 0.51
CCDC144NL-202ENST00000539177 AGTPBP1Q9UPW5 1226 aa18.26■□□□□ 0.51
CCDC144NL-202ENST00000539177 SALL1Q9NSC2 1324 aa18.25■□□□□ 0.51
CCDC144NL-202ENST00000539177 ENTPD3O75355 529 aa18.25■□□□□ 0.51
CCDC144NL-202ENST00000539177 SYN1P17600 705 aa18.25■□□□□ 0.51
CCDC144NL-202ENST00000539177 GDF15Q99988 308 aa18.25■□□□□ 0.51
CCDC144NL-202ENST00000539177 IDI2Q9BXS1 227 aa18.25■□□□□ 0.51
CCDC144NL-202ENST00000539177 DDX4Q9NQI0 724 aaKnown RBP18.25■□□□□ 0.51
CCDC144NL-202ENST00000539177 FAM196BA6NMK8 535 aa18.24■□□□□ 0.51
CCDC144NL-202ENST00000539177 CTNND1O60716 968 aaKnown RBP18.24■□□□□ 0.51
CCDC144NL-202ENST00000539177 TRIM32Q13049 653 aa18.24■□□□□ 0.51
CCDC144NL-202ENST00000539177 DZIP1Q86YF9 867 aaKnown RBP18.24■□□□□ 0.51
CCDC144NL-202ENST00000539177 DEFB123Q8N688 67 aa18.24■□□□□ 0.51
CCDC144NL-202ENST00000539177 DENND2AQ9ULE3 1009 aa18.24■□□□□ 0.51
CCDC144NL-202ENST00000539177 GAKO14976 1311 aa18.23■□□□□ 0.51
CCDC144NL-202ENST00000539177 FAM110CQ1W6H9 321 aa18.23■□□□□ 0.51
CCDC144NL-202ENST00000539177 CEP126Q9P2H0 1117 aa18.23■□□□□ 0.51
CCDC144NL-202ENST00000539177 ABCF2Q9UG63 623 aa18.23■□□□□ 0.51
CCDC144NL-202ENST00000539177 PNMA3Q9UL41 463 aa18.23■□□□□ 0.51
CCDC144NL-202ENST00000539177 FRMPD3Q5JV73 1810 aa18.23■□□□□ 0.51
CCDC144NL-202ENST00000539177 PTPRCP08575 1304 aa18.23■□□□□ 0.51
CCDC144NL-202ENST00000539177 HMGCRP04035 888 aa18.22■□□□□ 0.51
CCDC144NL-202ENST00000539177 ADORA1P30542 326 aa18.22■□□□□ 0.51
CCDC144NL-202ENST00000539177 BTDP43251 543 aa18.22■□□□□ 0.51
CCDC144NL-202ENST00000539177 CAPN2P17655 700 aa18.21■□□□□ 0.51
CCDC144NL-202ENST00000539177 BMP8BP34820 402 aa18.21■□□□□ 0.51
CCDC144NL-202ENST00000539177 MNX1P50219 401 aaPredicted RBP18.21■□□□□ 0.51
CCDC144NL-202ENST00000539177 MAP3K10Q02779 954 aa18.21■□□□□ 0.51
CCDC144NL-202ENST00000539177 SIPA1L1O43166 1804 aa18.21■□□□□ 0.51
CCDC144NL-202ENST00000539177 CDK5RAP2Q96SN8 1893 aa18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 SEMA3EO15041 775 aa18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 MAGEA10P43363 369 aaPredicted RBP18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 HMGCS2P54868 508 aa18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 SPP2Q13103 211 aa18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 CCDC102BQ68D86 513 aa18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 FAM9BQ8IZU0 186 aa18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 ZGPATQ8N5A5 531 aaKnown RBP18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 ANKLE1Q8NAG6 615 aa18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 NBPF3Q9H094 633 aa18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 C11orf49Q9H6J7 331 aa18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 HMX1Q9NP08 348 aaPredicted RBP18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 PA2G4Q9UQ80 394 aaKnown RBP18.2■□□□□ 0.5
CCDC144NL-202ENST00000539177 CIAO1O76071 339 aa18.19■□□□□ 0.5
CCDC144NL-202ENST00000539177 RASGRF1Q13972 1273 aa18.19■□□□□ 0.5
CCDC144NL-202ENST00000539177 PROCA1Q8NCQ7 364 aaPredicted RBP18.19■□□□□ 0.5
CCDC144NL-202ENST00000539177 SSH1Q8WYL5 1049 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms