RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 TMTC2Q8N394 836 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 LEO1Q8WVC0 666 aaPredicted RBP17.31■□□□□ 0.36
ATL3-203ENST00000538786 TCHHQ07283 1943 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 NID2Q14112 1375 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 GOLGA8AA7E2F4 631 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 LETM1O95202 739 aaPredicted RBP17.31■□□□□ 0.36
ATL3-203ENST00000538786 FGRP09769 529 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 IL1R1P14778 569 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 ADD1P35611 737 aaKnown RBP17.31■□□□□ 0.36
ATL3-203ENST00000538786 ATL3Q6DD88 541 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 SYNE3Q6ZMZ3 975 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 MICU3Q86XE3 530 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 C8orf76Q96K31 380 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 GPR101Q96P66 508 aaPredicted RBP17.31■□□□□ 0.36
ATL3-203ENST00000538786 CD209Q9NNX6 404 aa17.31■□□□□ 0.36
ATL3-203ENST00000538786 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
ATL3-203ENST00000538786 GSTO1P78417 241 aa17.3■□□□□ 0.36
ATL3-203ENST00000538786 WTAPQ15007 396 aa17.3■□□□□ 0.36
ATL3-203ENST00000538786 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
ATL3-203ENST00000538786 KLHL34Q8N239 644 aa17.3■□□□□ 0.36
ATL3-203ENST00000538786 FBXO18Q8NFZ0 1043 aa17.3■□□□□ 0.36
ATL3-203ENST00000538786 TBC1D16Q8TBP0 767 aa17.3■□□□□ 0.36
ATL3-203ENST00000538786 UBAC1Q9BSL1 405 aa17.3■□□□□ 0.36
ATL3-203ENST00000538786 DCP1AQ9NPI6 582 aaPredicted RBP17.3■□□□□ 0.36
ATL3-203ENST00000538786 USP17L12C9JPN9 530 aa17.29■□□□□ 0.36
ATL3-203ENST00000538786 USP17L21D6R901 530 aa17.29■□□□□ 0.36
ATL3-203ENST00000538786 PRKCSHP14314 528 aaPredicted RBP17.29■□□□□ 0.36
ATL3-203ENST00000538786 CDC27P30260 824 aa17.29■□□□□ 0.36
ATL3-203ENST00000538786 RCAN1P53805 252 aa17.29■□□□□ 0.36
ATL3-203ENST00000538786 STK11IPQ8N1F8 1099 aa17.29■□□□□ 0.36
ATL3-203ENST00000538786 POLLQ9UGP5 575 aa17.29■□□□□ 0.36
ATL3-203ENST00000538786 CHD4Q14839 1912 aa17.29■□□□□ 0.36
ATL3-203ENST00000538786 RXRAP19793 462 aa17.29■□□□□ 0.36
ATL3-203ENST00000538786 NASPP49321 788 aaPredicted RBP17.29■□□□□ 0.36
ATL3-203ENST00000538786 GUCY1B3Q02153 619 aa17.29■□□□□ 0.36
ATL3-203ENST00000538786 POTEAQ6S8J7 498 aa17.29■□□□□ 0.36
ATL3-203ENST00000538786 ZKSCAN3Q9BRR0 538 aa17.29■□□□□ 0.36
ATL3-203ENST00000538786 FAM217BQ9NTX9 383 aaPredicted RBP17.29■□□□□ 0.36
ATL3-203ENST00000538786 ARPP21Q9UBL0 812 aaPredicted RBP17.29■□□□□ 0.36
ATL3-203ENST00000538786 NRXN2Q9P2S2 1712 aa17.29■□□□□ 0.36
ATL3-203ENST00000538786 DUOX1Q9NRD9 1551 aa17.28■□□□□ 0.36
ATL3-203ENST00000538786 CYP2D7A0A087X1C5 515 aa17.28■□□□□ 0.36
ATL3-203ENST00000538786 GOLGA6L4A6NEF3 574 aa17.28■□□□□ 0.36
ATL3-203ENST00000538786 SRGNP10124 158 aa17.28■□□□□ 0.36
ATL3-203ENST00000538786 NPR1P16066 1061 aa17.28■□□□□ 0.36
ATL3-203ENST00000538786 NTRK3Q16288 839 aa17.28■□□□□ 0.36
ATL3-203ENST00000538786 TPRNQ4KMQ1 711 aa17.28■□□□□ 0.36
ATL3-203ENST00000538786 SBK1Q52WX2 424 aa17.28■□□□□ 0.36
ATL3-203ENST00000538786 ZNF396Q96N95 335 aaPredicted RBP17.28■□□□□ 0.36
ATL3-203ENST00000538786 MYL10Q9BUA6 226 aa17.28■□□□□ 0.36
ATL3-203ENST00000538786 ATP6V0A2Q9Y487 856 aa17.28■□□□□ 0.36
ATL3-203ENST00000538786 PARP3Q9Y6F1 533 aa17.28■□□□□ 0.36
ATL3-203ENST00000538786 SMIM22K7EJ46 135 aa17.27■□□□□ 0.36
ATL3-203ENST00000538786 LDHCP07864 332 aa17.27■□□□□ 0.36
ATL3-203ENST00000538786 MMP10P09238 476 aa17.27■□□□□ 0.36
ATL3-203ENST00000538786 PDE6BP35913 854 aa17.27■□□□□ 0.36
ATL3-203ENST00000538786 RBSNQ9H1K0 784 aa17.27■□□□□ 0.36
ATL3-203ENST00000538786 LRRC37AA6NMS7 1700 aa17.27■□□□□ 0.36
ATL3-203ENST00000538786 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.36
ATL3-203ENST00000538786 BAG3O95817 575 aa17.27■□□□□ 0.35
ATL3-203ENST00000538786 SLC3A2P08195 630 aaKnown RBP17.27■□□□□ 0.35
ATL3-203ENST00000538786 IARSP41252 1262 aaKnown RBP17.27■□□□□ 0.35
ATL3-203ENST00000538786 SEC23AQ15436 765 aa17.27■□□□□ 0.35
ATL3-203ENST00000538786 ILDR1Q86SU0 546 aaPredicted RBP17.27■□□□□ 0.35
ATL3-203ENST00000538786 CCDC144CPQ8IYA2 1237 aa17.27■□□□□ 0.35
ATL3-203ENST00000538786 STK36Q9NRP7 1315 aa17.27■□□□□ 0.35
ATL3-203ENST00000538786 C6orf229H3BNL8 230 aa17.26■□□□□ 0.35
ATL3-203ENST00000538786 ORC4O43929 436 aa17.26■□□□□ 0.35
ATL3-203ENST00000538786 PPP4CP60510 307 aa17.26■□□□□ 0.35
ATL3-203ENST00000538786 OTUD7BQ6GQQ9 843 aa17.26■□□□□ 0.35
ATL3-203ENST00000538786 ZSCAN10Q96SZ4 725 aaPredicted RBP17.26■□□□□ 0.35
ATL3-203ENST00000538786 ALG1Q9BT22 464 aa17.26■□□□□ 0.35
ATL3-203ENST00000538786 TSPY26PQ9H489 355 aa17.26■□□□□ 0.35
ATL3-203ENST00000538786 RCOR1Q9UKL0 485 aa17.26■□□□□ 0.35
ATL3-203ENST00000538786 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
ATL3-203ENST00000538786 TNKSO95271 1327 aa17.26■□□□□ 0.35
ATL3-203ENST00000538786 CCDC88AQ3V6T2 1871 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 CCDC196A0A1B0GTZ2 297 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 ALDH1B1P30837 517 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 GRIK5Q16478 980 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 BRAPQ7Z569 592 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 CERS3Q8IU89 383 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 NOL10Q9BSC4 688 aaKnown RBP17.25■□□□□ 0.35
ATL3-203ENST00000538786 LTBP1Q14766 1721 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 TNS1Q9HBL0 1735 aaKnown RBP17.25■□□□□ 0.35
ATL3-203ENST00000538786 RGPD3A6NKT7 1758 aaPredicted RBP17.25■□□□□ 0.35
ATL3-203ENST00000538786 RGPD4Q7Z3J3 1758 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 ANKRD31Q8N7Z5 1873 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 RANBP6O60518 1105 aaKnown RBP17.25■□□□□ 0.35
ATL3-203ENST00000538786 IFNAR1P17181 557 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 DIXDC1Q155Q3 683 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 RTN1Q16799 776 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 IQCA1Q86XH1 822 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 ZNF654Q8IZM8 581 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 TBC1D22AQ8WUA7 517 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 PHKBQ93100 1093 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 PGBD1Q96JS3 809 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 MKRN1Q9UHC7 482 aaKnown RBP17.25■□□□□ 0.35
ATL3-203ENST00000538786 MROH7-TTC4A0A0A0MT08 1334 aa17.25■□□□□ 0.35
ATL3-203ENST00000538786 FMNL1O95466 1100 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms