RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 SMIM22K7EJ46 135 aa26.55■■□□□ 1.84
HMGA2-206ENST00000536545 PPEF1O14829 653 aaPredicted RBP26.55■■□□□ 1.84
HMGA2-206ENST00000536545 LDHBP07195 334 aaKnown RBP26.55■■□□□ 1.84
HMGA2-206ENST00000536545 IL1R1P14778 569 aa26.55■■□□□ 1.84
HMGA2-206ENST00000536545 CTR9Q6PD62 1173 aa26.55■■□□□ 1.84
HMGA2-206ENST00000536545 MICU3Q86XE3 530 aa26.55■■□□□ 1.84
HMGA2-206ENST00000536545 TBC1D16Q8TBP0 767 aa26.55■■□□□ 1.84
HMGA2-206ENST00000536545 LEO1Q8WVC0 666 aaPredicted RBP26.55■■□□□ 1.84
HMGA2-206ENST00000536545 CD209Q9NNX6 404 aa26.55■■□□□ 1.84
HMGA2-206ENST00000536545 TOMM22Q9NS69 142 aa26.55■■□□□ 1.84
HMGA2-206ENST00000536545 FGRP09769 529 aa26.54■■□□□ 1.84
HMGA2-206ENST00000536545 PCP11498 1178 aaKnown RBP26.54■■□□□ 1.84
HMGA2-206ENST00000536545 SART3Q15020 963 aaKnown RBP26.54■■□□□ 1.84
HMGA2-206ENST00000536545 CCDC183Q5T5S1 534 aa26.54■■□□□ 1.84
HMGA2-206ENST00000536545 RGS22Q8NE09 1264 aa26.54■■□□□ 1.84
HMGA2-206ENST00000536545 DCP1AQ9NPI6 582 aaPredicted RBP26.54■■□□□ 1.84
HMGA2-206ENST00000536545 CYP2D7A0A087X1C5 515 aa26.53■■□□□ 1.84
HMGA2-206ENST00000536545 GOLGA8AA7E2F4 631 aa26.53■■□□□ 1.84
HMGA2-206ENST00000536545 CDKL5O76039 1030 aa26.53■■□□□ 1.84
HMGA2-206ENST00000536545 RXRAP19793 462 aa26.53■■□□□ 1.84
HMGA2-206ENST00000536545 CDC27P30260 824 aa26.53■■□□□ 1.84
HMGA2-206ENST00000536545 ADD1P35611 737 aaKnown RBP26.53■■□□□ 1.84
HMGA2-206ENST00000536545 SPATA32Q96LK8 384 aa26.53■■□□□ 1.84
HMGA2-206ENST00000536545 ATP8A2Q9NTI2 1148 aa26.53■■□□□ 1.84
HMGA2-206ENST00000536545 FAM217BQ9NTX9 383 aaPredicted RBP26.53■■□□□ 1.84
HMGA2-206ENST00000536545 POLLQ9UGP5 575 aa26.53■■□□□ 1.84
HMGA2-206ENST00000536545 ILDR1Q86SU0 546 aaPredicted RBP26.53■■□□□ 1.84
HMGA2-206ENST00000536545 ESR2Q92731 530 aa26.53■■□□□ 1.84
HMGA2-206ENST00000536545 TFIP11Q9UBB9 837 aaKnown RBP26.53■■□□□ 1.84
HMGA2-206ENST00000536545 SLC12A7Q9Y666 1083 aa26.53■■□□□ 1.84
HMGA2-206ENST00000536545 CCDC69A6NI79 296 aa26.52■■□□□ 1.84
HMGA2-206ENST00000536545 SRGNP10124 158 aa26.52■■□□□ 1.84
HMGA2-206ENST00000536545 GUCY1B3Q02153 619 aa26.52■■□□□ 1.84
HMGA2-206ENST00000536545 WTAPQ15007 396 aa26.52■■□□□ 1.84
HMGA2-206ENST00000536545 GRIK5Q16478 980 aa26.52■■□□□ 1.84
HMGA2-206ENST00000536545 SP8Q8IXZ3 490 aa26.52■■□□□ 1.84
HMGA2-206ENST00000536545 STK11IPQ8N1F8 1099 aa26.52■■□□□ 1.84
HMGA2-206ENST00000536545 C8orf76Q96K31 380 aa26.52■■□□□ 1.84
HMGA2-206ENST00000536545 DLEC1Q9Y238 1755 aa26.52■■□□□ 1.84
HMGA2-206ENST00000536545 MMP10P09238 476 aa26.51■■□□□ 1.83
HMGA2-206ENST00000536545 GSTO1P78417 241 aa26.51■■□□□ 1.83
HMGA2-206ENST00000536545 NTRK3Q16288 839 aa26.51■■□□□ 1.83
HMGA2-206ENST00000536545 ZKSCAN3Q9BRR0 538 aa26.51■■□□□ 1.83
HMGA2-206ENST00000536545 MYL10Q9BUA6 226 aa26.51■■□□□ 1.83
HMGA2-206ENST00000536545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.51■■□□□ 1.83
HMGA2-206ENST00000536545 USP17L12C9JPN9 530 aa26.51■■□□□ 1.83
HMGA2-206ENST00000536545 USP17L21D6R901 530 aa26.51■■□□□ 1.83
HMGA2-206ENST00000536545 NPR1P16066 1061 aa26.51■■□□□ 1.83
HMGA2-206ENST00000536545 RCAN1P53805 252 aa26.51■■□□□ 1.83
HMGA2-206ENST00000536545 SEC23AQ15436 765 aa26.51■■□□□ 1.83
HMGA2-206ENST00000536545 CPLX2Q6PUV4 134 aaKnown RBP26.51■■□□□ 1.83
HMGA2-206ENST00000536545 FBXO18Q8NFZ0 1043 aa26.51■■□□□ 1.83
HMGA2-206ENST00000536545 RGS17Q9UGC6 210 aaPredicted RBP26.51■■□□□ 1.83
HMGA2-206ENST00000536545 ATP6V0A2Q9Y487 856 aa26.51■■□□□ 1.83
HMGA2-206ENST00000536545 SBK1Q52WX2 424 aa26.5■■□□□ 1.83
HMGA2-206ENST00000536545 ARPP21Q9UBL0 812 aaPredicted RBP26.5■■□□□ 1.83
HMGA2-206ENST00000536545 CFAP45Q9UL16 551 aa26.5■■□□□ 1.83
HMGA2-206ENST00000536545 STK36Q9NRP7 1315 aa26.49■■□□□ 1.83
HMGA2-206ENST00000536545 ERICH2A1L162 156 aa26.49■■□□□ 1.83
HMGA2-206ENST00000536545 RANBP6O60518 1105 aaKnown RBP26.49■■□□□ 1.83
HMGA2-206ENST00000536545 ATL3Q6DD88 541 aa26.49■■□□□ 1.83
HMGA2-206ENST00000536545 TMTC2Q8N394 836 aa26.49■■□□□ 1.83
HMGA2-206ENST00000536545 UBAC1Q9BSL1 405 aa26.49■■□□□ 1.83
HMGA2-206ENST00000536545 RBSNQ9H1K0 784 aa26.49■■□□□ 1.83
HMGA2-206ENST00000536545 CCDC144CPQ8IYA2 1237 aa26.48■■□□□ 1.83
HMGA2-206ENST00000536545 PARP3Q9Y6F1 533 aa26.48■■□□□ 1.83
HMGA2-206ENST00000536545 MYH2Q9UKX2 1941 aa26.48■■□□□ 1.83
HMGA2-206ENST00000536545 TNKSO95271 1327 aa26.48■■□□□ 1.83
HMGA2-206ENST00000536545 NAV1Q8NEY1 1877 aa26.48■■□□□ 1.83
HMGA2-206ENST00000536545 ORC4O43929 436 aa26.48■■□□□ 1.83
HMGA2-206ENST00000536545 DIXDC1Q155Q3 683 aa26.48■■□□□ 1.83
HMGA2-206ENST00000536545 OTUD7BQ6GQQ9 843 aa26.48■■□□□ 1.83
HMGA2-206ENST00000536545 SYNE3Q6ZMZ3 975 aa26.48■■□□□ 1.83
HMGA2-206ENST00000536545 MKRN1Q9UHC7 482 aaKnown RBP26.48■■□□□ 1.83
HMGA2-206ENST00000536545 MROH7-TTC4A0A0A0MT08 1334 aa26.47■■□□□ 1.83
HMGA2-206ENST00000536545 NASPP49321 788 aaPredicted RBP26.47■■□□□ 1.83
HMGA2-206ENST00000536545 PPP4CP60510 307 aa26.47■■□□□ 1.83
HMGA2-206ENST00000536545 EVX2Q03828 476 aa26.47■■□□□ 1.83
HMGA2-206ENST00000536545 TPRNQ4KMQ1 711 aa26.47■■□□□ 1.83
HMGA2-206ENST00000536545 PDE6BP35913 854 aa26.46■■□□□ 1.83
HMGA2-206ENST00000536545 PHKBQ93100 1093 aa26.46■■□□□ 1.83
HMGA2-206ENST00000536545 ZNF396Q96N95 335 aaPredicted RBP26.46■■□□□ 1.83
HMGA2-206ENST00000536545 C6orf229H3BNL8 230 aa26.46■■□□□ 1.83
HMGA2-206ENST00000536545 CYP2D6P10635 497 aa26.46■■□□□ 1.83
HMGA2-206ENST00000536545 RTN1Q16799 776 aa26.46■■□□□ 1.83
HMGA2-206ENST00000536545 POTEAQ6S8J7 498 aa26.46■■□□□ 1.83
HMGA2-206ENST00000536545 ZNF654Q8IZM8 581 aa26.46■■□□□ 1.83
HMGA2-206ENST00000536545 KLHL34Q8N239 644 aa26.46■■□□□ 1.83
HMGA2-206ENST00000536545 PGBD1Q96JS3 809 aa26.46■■□□□ 1.83
HMGA2-206ENST00000536545 ALG1Q9BT22 464 aa26.46■■□□□ 1.83
HMGA2-206ENST00000536545 RTFDC1Q9BY42 306 aaPredicted RBP26.46■■□□□ 1.83
HMGA2-206ENST00000536545 FAM205AQ6ZU69 1335 aa26.45■■□□□ 1.83
HMGA2-206ENST00000536545 QSER1Q2KHR3 1735 aa26.45■■□□□ 1.82
HMGA2-206ENST00000536545 DDX60LQ5H9U9 1706 aaKnown RBP26.45■■□□□ 1.82
HMGA2-206ENST00000536545 LETM1O95202 739 aaPredicted RBP26.45■■□□□ 1.82
HMGA2-206ENST00000536545 IFNAR1P17181 557 aa26.45■■□□□ 1.82
HMGA2-206ENST00000536545 MSL1Q68DK7 614 aa26.45■■□□□ 1.82
HMGA2-206ENST00000536545 ENAHQ8N8S7 591 aaPredicted RBP26.45■■□□□ 1.82
HMGA2-206ENST00000536545 SH3RF3Q8TEJ3 882 aaPredicted RBP26.45■■□□□ 1.82
HMGA2-206ENST00000536545 USP28Q96RU2 1077 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms