RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 KINO60870 393 aaKnown RBP4.29□□□□□ -1.72
MCF2-210ENST00000536274 CLSTN1O94985 981 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 U2AF1L5P0DN76 240 aaPredicted RBP4.29□□□□□ -1.72
MCF2-210ENST00000536274 GCFC2P16383 781 aaKnown RBP4.29□□□□□ -1.72
MCF2-210ENST00000536274 U2AF1Q01081 240 aaKnown RBP eCLIP4.29□□□□□ -1.72
MCF2-210ENST00000536274 CUL4AQ13619 759 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 KCNB1Q14721 858 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 ZKSCAN8Q15776 578 aaPredicted RBP4.29□□□□□ -1.72
MCF2-210ENST00000536274 IQCA1Q86XH1 822 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 CCDC26Q8TAB7 109 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 DDX27Q96GQ7 796 aaKnown RBP4.29□□□□□ -1.72
MCF2-210ENST00000536274 SPON1Q9HCB6 807 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 HCSTQ9UBK5 93 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 TAF1LQ8IZX4 1826 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 SOS1Q07889 1333 aaPredicted RBP4.28□□□□□ -1.72
MCF2-210ENST00000536274 LRRIQ3A6PVS8 624 aaPredicted RBP4.28□□□□□ -1.72
MCF2-210ENST00000536274 GOLGA6L19H0YKK7 550 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 SRGAP3O43295 1099 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 MYO1BO43795 1136 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 KIF4AO95239 1232 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 ANAPC15P60006 121 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 PPP2R3AQ06190 1150 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 MFSD10Q14728 455 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 KARSQ15046 597 aaKnown RBP4.28□□□□□ -1.72
MCF2-210ENST00000536274 JAKMIP3Q5VZ66 844 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 TRIM65Q6PJ69 517 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 GSPT2Q8IYD1 628 aaKnown RBP4.28□□□□□ -1.72
MCF2-210ENST00000536274 AOPEPQ8N6M6 819 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 OXER1Q8TDS5 423 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 DHX58Q96C10 678 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 RUNDC1Q96C34 613 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 SPDL1Q96EA4 605 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 DDX11Q96FC9 970 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 EPAS1Q99814 870 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 BAG1Q99933 345 aaPredicted RBP4.28□□□□□ -1.72
MCF2-210ENST00000536274 UTP14AQ9BVJ6 771 aaKnown RBP4.28□□□□□ -1.72
MCF2-210ENST00000536274 FTOQ9C0B1 505 aaKnown RBP eCLIP4.28□□□□□ -1.72
MCF2-210ENST00000536274 NUCKS1Q9H1E3 243 aaKnown RBP4.28□□□□□ -1.72
MCF2-210ENST00000536274 GGNBP2Q9H3C7 697 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 LMCD1Q9NZU5 365 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 DDX20Q9UHI6 824 aaKnown RBP4.28□□□□□ -1.72
MCF2-210ENST00000536274 NCAPD2Q15021 1401 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 RTL1A6NKG5 1358 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 FAM83GA6ND36 823 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 SPDYE16A6NNV3 312 aaPredicted RBP4.28□□□□□ -1.72
MCF2-210ENST00000536274 GJB2P29033 226 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 RANBP1P43487 201 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 SCNN1BP51168 640 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 MAP3K9P80192 1104 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 ADCY2Q08462 1091 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 NEDD9Q14511 834 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 ACCSLQ4AC99 568 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 CCDC158Q5M9N0 1113 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 RNF20Q5VTR2 975 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 TSPYL6Q8N831 410 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 TCEANC2Q96MN5 208 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 SCLT1Q96NL6 688 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 YIPF3Q9GZM5 350 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 PSD3Q9NYI0 1048 aa4.28□□□□□ -1.72
MCF2-210ENST00000536274 OPLAHO14841 1288 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 ATP2C2O75185 946 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 RTN2O75298 545 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 PPFIA4O75335 1185 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 ZNF202O95125 648 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 IPO7O95373 1038 aaKnown RBP4.27□□□□□ -1.73
MCF2-210ENST00000536274 INPP5BP32019 993 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 RDXP35241 583 aaKnown RBP4.27□□□□□ -1.73
MCF2-210ENST00000536274 GRIK3Q13003 919 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 CDC37L1Q7L3B6 337 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 TDRD7Q8NHU6 1098 aaKnown RBP4.27□□□□□ -1.73
MCF2-210ENST00000536274 DESI2Q9BSY9 194 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 RBM28Q9NW13 759 aaKnown RBP4.27□□□□□ -1.73
MCF2-210ENST00000536274 KIAA1551Q9HCM1 1747 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 ADCY9O60503 1353 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 PRR36Q9H6K5 1346 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 BIN1O00499 593 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 FOXO3O43524 673 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 RNF40O75150 1001 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 NUDT7P0C024 238 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 MAGEA10P43363 369 aaPredicted RBP4.27□□□□□ -1.73
MCF2-210ENST00000536274 USP5P45974 858 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 AK2P54819 239 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 GNG11P61952 73 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 ETF1P62495 437 aaKnown RBP4.27□□□□□ -1.73
MCF2-210ENST00000536274 IQCB1Q15051 598 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 LRRFIP1Q32MZ4 808 aaKnown RBP4.27□□□□□ -1.73
MCF2-210ENST00000536274 RBM26Q5T8P6 1007 aaKnown RBP4.27□□□□□ -1.73
MCF2-210ENST00000536274 CCDC181Q5TID7 509 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 VPS53Q5VIR6 699 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 BICD2Q8TD16 824 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 TBC1D31Q96DN5 1066 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 KRTAP3-3Q9BYR6 98 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 KRTAP3-2Q9BYR7 98 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 KAT14Q9H8E8 782 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 IFNKQ9P0W0 207 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 TPCN1Q9ULQ1 816 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 LHX6Q9UPM6 363 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 TNRC6CQ9HCJ0 1690 aaKnown RBP4.27□□□□□ -1.73
MCF2-210ENST00000536274 ARFGEF1Q9Y6D6 1849 aa4.27□□□□□ -1.73
MCF2-210ENST00000536274 ANKRD33BA6NCL7 494 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms