RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 SGPL1O95470 568 aa10.02□□□□□ -0.81
CHFR-211ENST00000535897 INHAP05111 366 aa10.02□□□□□ -0.81
CHFR-211ENST00000535897 FLT3LGP49771 235 aa10.02□□□□□ -0.81
CHFR-211ENST00000535897 RGS3P49796 1198 aa10.02□□□□□ -0.81
CHFR-211ENST00000535897 PICALMQ13492 652 aa10.02□□□□□ -0.81
CHFR-211ENST00000535897 PRRT2Q7Z6L0 340 aaPredicted RBP10.02□□□□□ -0.81
CHFR-211ENST00000535897 UBE2Q1Q7Z7E8 422 aa10.02□□□□□ -0.81
CHFR-211ENST00000535897 DZIP1Q86YF9 867 aaKnown RBP10.02□□□□□ -0.81
CHFR-211ENST00000535897 MRPL50Q8N5N7 158 aaKnown RBP10.02□□□□□ -0.81
CHFR-211ENST00000535897 SLC17A8Q8NDX2 589 aa10.02□□□□□ -0.81
CHFR-211ENST00000535897 USP44Q9H0E7 712 aa10.02□□□□□ -0.81
CHFR-211ENST00000535897 ZBTB7BO15156 539 aaPredicted RBP10.01□□□□□ -0.81
CHFR-211ENST00000535897 PTPRAP18433 802 aa10.01□□□□□ -0.81
CHFR-211ENST00000535897 COA7Q96BR5 231 aa10.01□□□□□ -0.81
CHFR-211ENST00000535897 CEP126Q9P2H0 1117 aa10.01□□□□□ -0.81
CHFR-211ENST00000535897 ABCF2Q9UG63 623 aa10.01□□□□□ -0.81
CHFR-211ENST00000535897 DENND2AQ9ULE3 1009 aa10.01□□□□□ -0.81
CHFR-211ENST00000535897 DOCK1Q14185 1865 aa10.01□□□□□ -0.81
CHFR-211ENST00000535897 CUL9Q8IWT3 2517 aa10.01□□□□□ -0.81
CHFR-211ENST00000535897 MYH2Q9UKX2 1941 aa10.01□□□□□ -0.81
CHFR-211ENST00000535897 PHF20L1A8MW92 1017 aa10□□□□□ -0.81
CHFR-211ENST00000535897 SEMA3EO15041 775 aa10□□□□□ -0.81
CHFR-211ENST00000535897 ENTPD3O75355 529 aa10□□□□□ -0.81
CHFR-211ENST00000535897 UBTFL1P0CB47 393 aaPredicted RBP10□□□□□ -0.81
CHFR-211ENST00000535897 PHKA1P46020 1223 aa10□□□□□ -0.81
CHFR-211ENST00000535897 ATG9AQ7Z3C6 839 aa10□□□□□ -0.81
CHFR-211ENST00000535897 ZGPATQ8N5A5 531 aaKnown RBP10□□□□□ -0.81
CHFR-211ENST00000535897 ANKRD13CQ8N6S4 541 aa10□□□□□ -0.81
CHFR-211ENST00000535897 PXYLP1Q8TE99 480 aa10□□□□□ -0.81
CHFR-211ENST00000535897 SSH1Q8WYL5 1049 aa10□□□□□ -0.81
CHFR-211ENST00000535897 SLC45A1Q9Y2W3 748 aa10□□□□□ -0.81
CHFR-211ENST00000535897 AFG3L2Q9Y4W6 797 aa10□□□□□ -0.81
CHFR-211ENST00000535897 SALL1Q9NSC2 1324 aa10□□□□□ -0.81
CHFR-211ENST00000535897 ATRNL1Q5VV63 1379 aa10□□□□□ -0.81
CHFR-211ENST00000535897 PTPRFP10586 1907 aa9.99□□□□□ -0.81
CHFR-211ENST00000535897 A0A1W2PPC1 479 aa9.99□□□□□ -0.81
CHFR-211ENST00000535897 DLL1O00548 723 aa9.99□□□□□ -0.81
CHFR-211ENST00000535897 BTDP43251 543 aa9.99□□□□□ -0.81
CHFR-211ENST00000535897 RFX5P48382 616 aaPredicted RBP9.99□□□□□ -0.81
CHFR-211ENST00000535897 IRF5Q13568 498 aa9.99□□□□□ -0.81
CHFR-211ENST00000535897 CCDC84Q86UT8 332 aaPredicted RBP9.99□□□□□ -0.81
CHFR-211ENST00000535897 SLF2Q8IX21 1173 aa9.99□□□□□ -0.81
CHFR-211ENST00000535897 PAWRQ96IZ0 340 aaKnown RBP9.99□□□□□ -0.81
CHFR-211ENST00000535897 IDI2Q9BXS1 227 aa9.99□□□□□ -0.81
CHFR-211ENST00000535897 PRO3102Q9H379 93 aa9.99□□□□□ -0.81
CHFR-211ENST00000535897 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.99□□□□□ -0.81
CHFR-211ENST00000535897 STAP2Q9UGK3 403 aa9.99□□□□□ -0.81
CHFR-211ENST00000535897 PNMA3Q9UL41 463 aa9.99□□□□□ -0.81
CHFR-211ENST00000535897 LAMA3Q16787 3333 aa9.99□□□□□ -0.81
CHFR-211ENST00000535897 A0A0C4DFX4 3053 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 DDTLA6NHG4 134 aaPredicted RBP9.98□□□□□ -0.81
CHFR-211ENST00000535897 FAM196BA6NMK8 535 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 CTNND1O60716 968 aaKnown RBP9.98□□□□□ -0.81
CHFR-211ENST00000535897 CIAO1O76071 339 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 SLURP2P0DP57 97 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 ADORA1P30542 326 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 IL15P40933 162 aaPredicted RBP9.98□□□□□ -0.81
CHFR-211ENST00000535897 TREML2Q5T2D2 321 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 SPTY2D1Q68D10 685 aaPredicted RBP9.98□□□□□ -0.81
CHFR-211ENST00000535897 CCDC102BQ68D86 513 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 SH3BP5LQ7L8J4 393 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 NECAB2Q7Z6G3 386 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 C7orf61Q8IZ16 206 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 LRCH3Q96II8 777 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.98□□□□□ -0.81
CHFR-211ENST00000535897 SMC4Q9NTJ3 1288 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 AGTPBP1Q9UPW5 1226 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 PHIPQ8WWQ0 1821 aa9.98□□□□□ -0.81
CHFR-211ENST00000535897 COL6A3P12111 3177 aa9.97□□□□□ -0.81
CHFR-211ENST00000535897 SOX1O00570 391 aaPredicted RBP9.97□□□□□ -0.81
CHFR-211ENST00000535897 CAPN2P17655 700 aa9.97□□□□□ -0.81
CHFR-211ENST00000535897 PABPC4Q13310 644 aaKnown RBP eCLIP9.97□□□□□ -0.81
CHFR-211ENST00000535897 RASGRF1Q13972 1273 aa9.97□□□□□ -0.81
CHFR-211ENST00000535897 FAM110CQ1W6H9 321 aa9.97□□□□□ -0.81
CHFR-211ENST00000535897 DIS3LQ8TF46 1054 aaKnown RBP9.97□□□□□ -0.81
CHFR-211ENST00000535897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.97□□□□□ -0.81
CHFR-211ENST00000535897 DDX4Q9NQI0 724 aaKnown RBP9.97□□□□□ -0.81
CHFR-211ENST00000535897 PAK6Q9NQU5 681 aaPredicted RBP9.97□□□□□ -0.81
CHFR-211ENST00000535897 FBXO3Q9UK99 471 aa9.97□□□□□ -0.81
CHFR-211ENST00000535897 MROH7-TTC4A0A0A0MT08 1334 aa9.97□□□□□ -0.81
CHFR-211ENST00000535897 GAKO14976 1311 aa9.97□□□□□ -0.81
CHFR-211ENST00000535897 RFX7Q2KHR2 1363 aa9.97□□□□□ -0.81
CHFR-211ENST00000535897 ATAD5Q96QE3 1844 aa9.96□□□□□ -0.81
CHFR-211ENST00000535897 E9PSI1 815 aa9.96□□□□□ -0.82
CHFR-211ENST00000535897 HMGCRP04035 888 aa9.96□□□□□ -0.82
CHFR-211ENST00000535897 SPP2Q13103 211 aa9.96□□□□□ -0.82
CHFR-211ENST00000535897 CRISPLD2Q9H0B8 497 aa9.96□□□□□ -0.82
CHFR-211ENST00000535897 ZMYND8Q9ULU4 1186 aaPredicted RBP9.96□□□□□ -0.82
CHFR-211ENST00000535897 PA2G4Q9UQ80 394 aaKnown RBP9.96□□□□□ -0.82
CHFR-211ENST00000535897 HDAC5Q9UQL6 1122 aa9.96□□□□□ -0.82
CHFR-211ENST00000535897 ALPK3Q96L96 1907 aa9.95□□□□□ -0.82
CHFR-211ENST00000535897 GCLCP48506 637 aaPredicted RBP9.95□□□□□ -0.82
CHFR-211ENST00000535897 HMGCS2P54868 508 aa9.95□□□□□ -0.82
CHFR-211ENST00000535897 TIMM10P62072 90 aa9.95□□□□□ -0.82
CHFR-211ENST00000535897 MAP3K10Q02779 954 aa9.95□□□□□ -0.82
CHFR-211ENST00000535897 MECOMQ03112 1051 aa9.95□□□□□ -0.82
CHFR-211ENST00000535897 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
CHFR-211ENST00000535897 GORABQ5T7V8 394 aa9.95□□□□□ -0.82
CHFR-211ENST00000535897 ERICH6Q7L0X2 663 aa9.95□□□□□ -0.82
CHFR-211ENST00000535897 ANKLE1Q8NAG6 615 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms