RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 GATAD2BQ8WXI9 593 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 NKD1Q969G9 470 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 ELMO3Q96BJ8 720 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 LENG1Q96BZ8 264 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-202ENST00000535689 ARMC5Q96C12 935 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 CRBNQ96SW2 442 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 RNF19AQ9NV58 838 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.03□□□□□ -1.6
SNHG1-202ENST00000535689 FHAD1B1AJZ9 1412 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 NUP160Q12769 1436 aa5.03□□□□□ -1.6
SNHG1-202ENST00000535689 ABCA10Q8WWZ4 1543 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 LMTK3Q96Q04 1460 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 FBXO24O75426 580 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 CELA3AP09093 270 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 NLRP12P59046 1061 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 RPL6Q02878 288 aaKnown RBP5.02□□□□□ -1.61
SNHG1-202ENST00000535689 APOBRQ0VD83 1088 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 MAP3K11Q16584 847 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 UVSSAQ2YD98 709 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 NAALADL2Q58DX5 795 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 MAP1SQ66K74 1059 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-202ENST00000535689 METTL16Q86W50 562 aaKnown RBP5.02□□□□□ -1.61
SNHG1-202ENST00000535689 GOLM1Q8NBJ4 401 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 RASGRP4Q8TDF6 673 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 ZNF296Q8WUU4 475 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-202ENST00000535689 GPRASP2Q96D09 838 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 DRC1Q96MC2 740 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 SUGCTQ9HAC7 445 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 KCNQ5Q9NR82 932 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 HIF3AQ9Y2N7 669 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 DIP2BQ9P265 1576 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 HECW2Q9P2P5 1572 aa5.02□□□□□ -1.61
SNHG1-202ENST00000535689 ADGRL1O94910 1474 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 WRNQ14191 1432 aaPredicted RBP eCLIP5.01□□□□□ -1.61
SNHG1-202ENST00000535689 PF4P02776 101 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 ATP2B1P20020 1258 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 CHMP4BP1P59074 171 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 ZNF252P-AS1Q0IIN9 211 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 KIF4BQ2VIQ3 1234 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 TXNDC11Q6PKC3 985 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 FAM196AQ6ZSG2 479 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 C8orf86Q6ZUL3 223 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 ACAD11Q709F0 780 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 ILDR2Q71H61 639 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 CDC37L1Q7L3B6 337 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 REXO1Q8N1G1 1221 aaKnown RBP5.01□□□□□ -1.61
SNHG1-202ENST00000535689 SMG8Q8ND04 991 aaKnown RBP5.01□□□□□ -1.61
SNHG1-202ENST00000535689 OR6P1Q8NGX9 317 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 CPLX3Q8WVH0 158 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 SREK1Q8WXA9 508 aaKnown RBP5.01□□□□□ -1.61
SNHG1-202ENST00000535689 LRRC3Q9BY71 257 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 AKTIPQ9H8T0 292 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 PIDD1Q9HB75 910 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 PCDHA4Q9UN74 947 aa5.01□□□□□ -1.61
SNHG1-202ENST00000535689 R3HCC1Q9Y3T6 440 aaKnown RBP5.01□□□□□ -1.61
SNHG1-202ENST00000535689 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 LOC100289279A0A1B0GTE1 492 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 FANCGO15287 622 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 GAS2O43903 313 aaKnown RBP5□□□□□ -1.61
SNHG1-202ENST00000535689 ITGB2P05107 769 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 SSBP05455 408 aaKnown RBP eCLIP5□□□□□ -1.61
SNHG1-202ENST00000535689 COL8A1P27658 744 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 GJA8P48165 433 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 ERVK-24P63145 666 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 ID3Q02535 119 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 LDLRAD1Q5T700 205 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 C12orf50Q8NA57 414 aaPredicted RBP5□□□□□ -1.61
SNHG1-202ENST00000535689 ZNF507Q8TCN5 953 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 JARID2Q92833 1246 aaPredicted RBP5□□□□□ -1.61
SNHG1-202ENST00000535689 TRIM11Q96F44 468 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 RHOVQ96L33 236 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 HIRIP3Q9BW71 556 aaPredicted RBP5□□□□□ -1.61
SNHG1-202ENST00000535689 CARD10Q9BWT7 1032 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 KRTAP4-6Q9BYQ5 205 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 PPP1R1BQ9UD71 204 aaPredicted RBP5□□□□□ -1.61
SNHG1-202ENST00000535689 SLC12A7Q9Y666 1083 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 PLB1Q6P1J6 1458 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 TEX14Q8IWB6 1497 aa5□□□□□ -1.61
SNHG1-202ENST00000535689 ERICH3Q5RHP9 1530 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 ABCA5Q8WWZ7 1642 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-202ENST00000535689 GREM1O60565 184 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 AOC2O75106 756 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 TFE3P19532 575 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-202ENST00000535689 MCM4P33991 863 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 USP11P51784 963 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 PAK2Q13177 524 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 COL9A3Q14050 684 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-202ENST00000535689 MAP7Q14244 749 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 ZNF394Q53GI3 561 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 C9orf131Q5VYM1 1079 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 PDZD3Q86UT5 571 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 SLITRK4Q8IW52 837 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 DCAF5Q96JK2 942 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 TMPRSS13Q9BYE2 586 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 SSU72Q9NP77 194 aaKnown RBP4.99□□□□□ -1.61
SNHG1-202ENST00000535689 ADAM30Q9UKF2 790 aa4.99□□□□□ -1.61
SNHG1-202ENST00000535689 CUX1P39880 1505 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 CILPO75339 1184 aa4.98□□□□□ -1.61
SNHG1-202ENST00000535689 DEAF1O75398 565 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms