RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 RIPOR2Q9Y4F9 1068 aa22.22■■□□□ 1.15
CAPN1-226ENST00000533820 A0A0G2JS52 829 aa22.22■■□□□ 1.15
CAPN1-226ENST00000533820 TOP1P11387 765 aaKnown RBP22.22■■□□□ 1.15
CAPN1-226ENST00000533820 PDE6AP16499 860 aa22.22■■□□□ 1.15
CAPN1-226ENST00000533820 CALCOCO1Q9P1Z2 691 aa22.22■■□□□ 1.15
CAPN1-226ENST00000533820 TULP2O00295 520 aa22.22■■□□□ 1.15
CAPN1-226ENST00000533820 ZBTB38Q8NAP3 1195 aaPredicted RBP22.22■■□□□ 1.15
CAPN1-226ENST00000533820 TTLL11Q8NHH1 800 aa22.22■■□□□ 1.15
CAPN1-226ENST00000533820 PCCAP05165 728 aaPredicted RBP22.21■■□□□ 1.15
CAPN1-226ENST00000533820 JMYQ8N9B5 988 aa22.21■■□□□ 1.15
CAPN1-226ENST00000533820 KIF2AO00139 706 aaPredicted RBP22.21■■□□□ 1.15
CAPN1-226ENST00000533820 CCDC102BQ68D86 513 aa22.21■■□□□ 1.15
CAPN1-226ENST00000533820 ARMT1Q9H993 441 aa22.21■■□□□ 1.15
CAPN1-226ENST00000533820 TRMT112Q9UI30 125 aaKnown RBP22.21■■□□□ 1.15
CAPN1-226ENST00000533820 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.21■■□□□ 1.153e-6■□□□□ 10.3
CAPN1-226ENST00000533820 SLC12A7Q9Y666 1083 aa22.21■■□□□ 1.15
CAPN1-226ENST00000533820 UBN2Q6ZU65 1347 aa22.21■■□□□ 1.15
CAPN1-226ENST00000533820 CPDO75976 1380 aa22.21■■□□□ 1.15
CAPN1-226ENST00000533820 IL2RBP14784 551 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 BMP6P22004 513 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 CNPY4Q8N129 248 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 ZSWIM5Q9P217 1185 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 MST1RQ04912 1400 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 SPATA31A3Q5VYP0 1347 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 PRKAB2O43741 272 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 CDKL5O76039 1030 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 EVA1CP58658 441 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 ETF1P62495 437 aaKnown RBP22.2■■□□□ 1.14
CAPN1-226ENST00000533820 MAP3K14Q99558 947 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.2■■□□□ 1.14
CAPN1-226ENST00000533820 ANKRD18BA2A2Z9 1011 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 PSDA5PKW4 1024 aaPredicted RBP22.2■■□□□ 1.14
CAPN1-226ENST00000533820 FANCGO15287 622 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 ADKP55263 362 aaKnown RBP22.2■■□□□ 1.14
CAPN1-226ENST00000533820 FAM217BQ9NTX9 383 aaPredicted RBP22.2■■□□□ 1.14
CAPN1-226ENST00000533820 TBC1D2BQ9UPU7 963 aa22.2■■□□□ 1.14
CAPN1-226ENST00000533820 LMTK3Q96Q04 1460 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 TJP1Q07157 1748 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 MBD4O95243 580 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 MAGEB6Q8N7X4 407 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 IGDCC4Q8TDY8 1250 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 NUP133Q8WUM0 1156 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 NAPBQ9H115 298 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 FEZ2Q9UHY8 353 aaPredicted RBP22.19■■□□□ 1.14
CAPN1-226ENST00000533820 TUBE1Q9UJT0 475 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 HPSEQ9Y251 543 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 KIF1AQ12756 1690 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 WDR17Q8IZU2 1322 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 IRS4O14654 1257 aaPredicted RBP22.19■■□□□ 1.14
CAPN1-226ENST00000533820 IKBKBO14920 756 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 KRBA2Q6ZNG9 492 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 LY9Q9HBG7 655 aa22.19■■□□□ 1.14
CAPN1-226ENST00000533820 ALS2Q96Q42 1657 aa22.18■■□□□ 1.14
CAPN1-226ENST00000533820 GLI3P10071 1580 aa22.18■■□□□ 1.14
CAPN1-226ENST00000533820 POLR2DO15514 142 aaKnown RBP22.18■■□□□ 1.14
CAPN1-226ENST00000533820 NR5A1Q13285 461 aa22.18■■□□□ 1.14
CAPN1-226ENST00000533820 EP400NLQ6ZTU2 488 aa22.18■■□□□ 1.14
CAPN1-226ENST00000533820 MNS1Q8NEH6 495 aa22.18■■□□□ 1.14
CAPN1-226ENST00000533820 CARD6Q9BX69 1037 aa22.18■■□□□ 1.14
CAPN1-226ENST00000533820 CSF1RP07333 972 aa22.18■■□□□ 1.14
CAPN1-226ENST00000533820 CLCN6P51797 869 aa22.18■■□□□ 1.14
CAPN1-226ENST00000533820 SSRP1Q08945 709 aaKnown RBP22.18■■□□□ 1.14
CAPN1-226ENST00000533820 NTRK3Q16288 839 aa22.18■■□□□ 1.14
CAPN1-226ENST00000533820 RESP18Q5W5W9 173 aa22.18■■□□□ 1.14
CAPN1-226ENST00000533820 L2HGDHQ9H9P8 463 aa22.18■■□□□ 1.14
CAPN1-226ENST00000533820 IQSEC3Q9UPP2 1182 aaPredicted RBP22.18■■□□□ 1.14
CAPN1-226ENST00000533820 TACC3Q9Y6A5 838 aa22.18■■□□□ 1.14
CAPN1-226ENST00000533820 hCG_1642624A0A1W2PR95 340 aa22.17■■□□□ 1.14
CAPN1-226ENST00000533820 TNS3Q68CZ2 1445 aa22.17■■□□□ 1.14
CAPN1-226ENST00000533820 USP49Q70CQ1 688 aa22.17■■□□□ 1.14
CAPN1-226ENST00000533820 MIGA1Q8NAN2 632 aa22.17■■□□□ 1.14
CAPN1-226ENST00000533820 UBXN4Q92575 508 aa22.17■■□□□ 1.14
CAPN1-226ENST00000533820 EPB41L4AQ9HCS5 686 aaPredicted RBP22.17■■□□□ 1.14
CAPN1-226ENST00000533820 INTS13Q9NVM9 706 aa22.17■■□□□ 1.14
CAPN1-226ENST00000533820 RIC1Q4ADV7 1423 aa22.17■■□□□ 1.14
CAPN1-226ENST00000533820 NLRP10Q86W26 655 aa22.17■■□□□ 1.14
CAPN1-226ENST00000533820 DIS3L2Q8IYB7 885 aaKnown RBP22.17■■□□□ 1.14
CAPN1-226ENST00000533820 STRBPQ96SI9 672 aaKnown RBP22.17■■□□□ 1.14
CAPN1-226ENST00000533820 DESI2Q9BSY9 194 aa22.17■■□□□ 1.14
CAPN1-226ENST00000533820 PPP6R2O75170 966 aa22.16■■□□□ 1.14
CAPN1-226ENST00000533820 FMR1Q06787 632 aaKnown RBP eCLIP22.16■■□□□ 1.141e-6■■■□□ 16.5
CAPN1-226ENST00000533820 SERTAD1Q9UHV2 236 aa22.16■■□□□ 1.14
CAPN1-226ENST00000533820 COL18A1P39060 1754 aa22.16■■□□□ 1.14
CAPN1-226ENST00000533820 CTSWP56202 376 aa22.16■■□□□ 1.14
CAPN1-226ENST00000533820 VSTM4Q8IW00 320 aa22.16■■□□□ 1.14
CAPN1-226ENST00000533820 PIGBQ92521 554 aa22.16■■□□□ 1.14
CAPN1-226ENST00000533820 KRI1Q8N9T8 703 aaKnown RBP22.15■■□□□ 1.14
CAPN1-226ENST00000533820 NFE2L3Q9Y4A8 694 aa22.15■■□□□ 1.14
CAPN1-226ENST00000533820 CBFA2T2O43439 604 aa22.15■■□□□ 1.14
CAPN1-226ENST00000533820 SEC31AO94979 1220 aaKnown RBP22.15■■□□□ 1.14
CAPN1-226ENST00000533820 PDE8BO95263 885 aa22.15■■□□□ 1.14
CAPN1-226ENST00000533820 CCDC93Q567U6 631 aa22.15■■□□□ 1.14
CAPN1-226ENST00000533820 KLHL10Q6JEL2 608 aa22.15■■□□□ 1.14
CAPN1-226ENST00000533820 TRIM65Q6PJ69 517 aa22.15■■□□□ 1.14
CAPN1-226ENST00000533820 IFNL3Q8IZI9 196 aa22.15■■□□□ 1.14
CAPN1-226ENST00000533820 RSPH14Q9UHP6 348 aa22.15■■□□□ 1.14
CAPN1-226ENST00000533820 SMIM22K7EJ46 135 aa22.15■■□□□ 1.14
CAPN1-226ENST00000533820 CASP1P29466 404 aa22.15■■□□□ 1.14
CAPN1-226ENST00000533820 NOSTRINQ8IVI9 506 aa22.15■■□□□ 1.14
CAPN1-226ENST00000533820 PCDHB6Q9Y5E3 794 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms