RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 WNT10BO00744 389 aa16.9■□□□□ 0.3
TRIM3-212ENST00000533064 CYP21A2P08686 494 aa16.9■□□□□ 0.3
TRIM3-212ENST00000533064 KRT32Q14532 448 aa16.9■□□□□ 0.3
TRIM3-212ENST00000533064 KIF4BQ2VIQ3 1234 aa16.9■□□□□ 0.3
TRIM3-212ENST00000533064 WDR90Q96KV7 1748 aa16.9■□□□□ 0.3
TRIM3-212ENST00000533064 MINDY4BA8MYZ0 360 aa16.89■□□□□ 0.29
TRIM3-212ENST00000533064 WDHD1O75717 1129 aaPredicted RBP16.89■□□□□ 0.29
TRIM3-212ENST00000533064 POLR3DP05423 398 aaPredicted RBP16.89■□□□□ 0.29
TRIM3-212ENST00000533064 HAND2P61296 217 aa16.89■□□□□ 0.29
TRIM3-212ENST00000533064 TBC1D10BQ4KMP7 808 aaPredicted RBP16.89■□□□□ 0.29
TRIM3-212ENST00000533064 SAMD7Q7Z3H4 446 aa16.89■□□□□ 0.29
TRIM3-212ENST00000533064 IDI2Q9BXS1 227 aa16.89■□□□□ 0.29
TRIM3-212ENST00000533064 SNX14Q9Y5W7 946 aa16.89■□□□□ 0.29
TRIM3-212ENST00000533064 USP17L12C9JPN9 530 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 USP17L21D6R901 530 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 SLC3A2P08195 630 aaKnown RBP16.88■□□□□ 0.29
TRIM3-212ENST00000533064 SPDYE2Q495Y8 402 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 CTR9Q6PD62 1173 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 KCNB2Q92953 911 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 ZBED3Q96IU2 234 aaPredicted RBP16.88■□□□□ 0.29
TRIM3-212ENST00000533064 L3MBTL3Q96JM7 780 aaPredicted RBP16.88■□□□□ 0.29
TRIM3-212ENST00000533064 VEZTQ9HBM0 779 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 ZNF70Q9UC06 446 aaPredicted RBP16.88■□□□□ 0.29
TRIM3-212ENST00000533064 DAXXQ9UER7 740 aaPredicted RBP16.88■□□□□ 0.29
TRIM3-212ENST00000533064 PALD1Q9ULE6 856 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 CLRN2A0PK11 232 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
TRIM3-212ENST00000533064 PSMA5P28066 241 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 EPS15P42566 896 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 PPARAQ07869 468 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 BECN1Q14457 450 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 NBPF9Q3BBW0 867 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 TSGA10IPQ3SY00 556 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 SBK1Q52WX2 424 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
TRIM3-212ENST00000533064 ADARB2Q9NS39 739 aaKnown RBP16.88■□□□□ 0.29
TRIM3-212ENST00000533064 MKRN1Q9UHC7 482 aaKnown RBP16.88■□□□□ 0.29
TRIM3-212ENST00000533064 CACNB3P54284 484 aa16.87■□□□□ 0.29
TRIM3-212ENST00000533064 TRDNQ13061 729 aa16.87■□□□□ 0.29
TRIM3-212ENST00000533064 TNFAIP1Q13829 316 aa16.87■□□□□ 0.29
TRIM3-212ENST00000533064 FKBP1CQ5VVH2 108 aa16.87■□□□□ 0.29
TRIM3-212ENST00000533064 OSBPL5Q9H0X9 879 aaPredicted RBP16.87■□□□□ 0.29
TRIM3-212ENST00000533064 DDX4Q9NQI0 724 aaKnown RBP16.87■□□□□ 0.29
TRIM3-212ENST00000533064 SAP30BPQ9UHR5 308 aaKnown RBP16.87■□□□□ 0.29
TRIM3-212ENST00000533064 HACL1Q9UJ83 578 aa16.87■□□□□ 0.29
TRIM3-212ENST00000533064 IQCA1LA6NCM1 817 aa16.86■□□□□ 0.29
TRIM3-212ENST00000533064 ENTPD3O75355 529 aa16.86■□□□□ 0.29
TRIM3-212ENST00000533064 HLA-DOAP06340 250 aa16.86■□□□□ 0.29
TRIM3-212ENST00000533064 TNNI2P48788 182 aa16.86■□□□□ 0.29
TRIM3-212ENST00000533064 TCP10Q12799 353 aa16.86■□□□□ 0.29
TRIM3-212ENST00000533064 NFIAQ12857 509 aa16.86■□□□□ 0.29
TRIM3-212ENST00000533064 TTC6Q86TZ1 520 aa16.86■□□□□ 0.29
TRIM3-212ENST00000533064 ZSCAN29Q8IWY8 852 aaPredicted RBP16.86■□□□□ 0.29
TRIM3-212ENST00000533064 DHX36Q9H2U1 1008 aaKnown RBP16.86■□□□□ 0.29
TRIM3-212ENST00000533064 RNF41Q9H4P4 317 aaPredicted RBP16.86■□□□□ 0.29
TRIM3-212ENST00000533064 ANAPC4Q9UJX5 808 aa16.86■□□□□ 0.29
TRIM3-212ENST00000533064 SIPA1L1O43166 1804 aa16.86■□□□□ 0.29
TRIM3-212ENST00000533064 TCP10L2B9ZVM9 353 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 E7EWF7 191 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 EGFRP00533 1210 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 CTDSPL2Q05D32 466 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 RABEP1Q15276 862 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 C12orf60Q5U649 245 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 MFSD6Q6ZSS7 791 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 JAKMIP1Q96N16 626 aaKnown RBP16.85■□□□□ 0.29
TRIM3-212ENST00000533064 KIF2CQ99661 725 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 FAM198AQ9UFP1 575 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 CASTP20810 708 aaKnown RBP16.85■□□□□ 0.29
TRIM3-212ENST00000533064 SLC4A8Q2Y0W8 1093 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 AKNAD1Q5T1N1 836 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 RALYLQ86SE5 291 aaKnown RBP16.85■□□□□ 0.29
TRIM3-212ENST00000533064 TRPM4Q8TD43 1214 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 IL17RAQ96F46 866 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 TM6SF1Q9BZW5 370 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 CNNM2Q9H8M5 875 aa16.85■□□□□ 0.29
TRIM3-212ENST00000533064 COL2A1P02458 1487 aaPredicted RBP16.84■□□□□ 0.29
TRIM3-212ENST00000533064 CYP2D7A0A087X1C5 515 aa16.84■□□□□ 0.29
TRIM3-212ENST00000533064 HMGB1P09429 215 aaKnown RBP16.84■□□□□ 0.29
TRIM3-212ENST00000533064 PCP11498 1178 aaKnown RBP16.84■□□□□ 0.29
TRIM3-212ENST00000533064 PDE4BQ07343 736 aa16.84■□□□□ 0.29
TRIM3-212ENST00000533064 FAM83AQ86UY5 434 aa16.84■□□□□ 0.29
TRIM3-212ENST00000533064 NCOA7Q8NI08 942 aa16.84■□□□□ 0.29
TRIM3-212ENST00000533064 STAG1Q8WVM7 1258 aa16.84■□□□□ 0.29
TRIM3-212ENST00000533064 NEK1Q96PY6 1258 aa16.84■□□□□ 0.29
TRIM3-212ENST00000533064 ZNF287Q9HBT7 754 aa16.84■□□□□ 0.29
TRIM3-212ENST00000533064 TOMM22Q9NS69 142 aa16.84■□□□□ 0.29
TRIM3-212ENST00000533064 ADCK5Q3MIX3 580 aa16.83■□□□□ 0.28
TRIM3-212ENST00000533064 BLOC1S2Q6QNY1 142 aa16.83■□□□□ 0.28
TRIM3-212ENST00000533064 APOBEC3FQ8IUX4 373 aaKnown RBP16.83■□□□□ 0.28
TRIM3-212ENST00000533064 STK11IPQ8N1F8 1099 aa16.83■□□□□ 0.28
TRIM3-212ENST00000533064 IL27Q8NEV9 243 aa16.83■□□□□ 0.28
TRIM3-212ENST00000533064 FAM151AQ8WW52 585 aa16.83■□□□□ 0.28
TRIM3-212ENST00000533064 KRT23Q9C075 422 aa16.83■□□□□ 0.28
TRIM3-212ENST00000533064 CYP46A1Q9Y6A2 500 aa16.83■□□□□ 0.28
TRIM3-212ENST00000533064 TAF6LQ9Y6J9 622 aa16.83■□□□□ 0.28
TRIM3-212ENST00000533064 CYP2D6P10635 497 aa16.82■□□□□ 0.28
TRIM3-212ENST00000533064 EPHX2P34913 555 aa16.82■□□□□ 0.28
TRIM3-212ENST00000533064 USP50Q70EL3 339 aaPredicted RBP16.82■□□□□ 0.28
TRIM3-212ENST00000533064 TBC1D10CQ8IV04 446 aa16.82■□□□□ 0.28
TRIM3-212ENST00000533064 TRIM34Q9BYJ4 488 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms