RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
NXF1-213ENST00000532297 CBFA2T2O43439 604 aa17.07■□□□□ 0.32
NXF1-213ENST00000532297 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
NXF1-213ENST00000532297 METTL24Q5JXM2 366 aa17.07■□□□□ 0.32
NXF1-213ENST00000532297 SRLQ86TD4 932 aa17.07■□□□□ 0.32
NXF1-213ENST00000532297 MICU3Q86XE3 530 aa17.07■□□□□ 0.32
NXF1-213ENST00000532297 KCNG4Q8TDN1 519 aa17.07■□□□□ 0.32
NXF1-213ENST00000532297 CPLX1O14810 134 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 TOP1P11387 765 aaKnown RBP17.06■□□□□ 0.32
NXF1-213ENST00000532297 IRX3P78415 501 aaPredicted RBP17.06■□□□□ 0.32
NXF1-213ENST00000532297 RSRC2Q7L4I2 434 aaKnown RBP17.06■□□□□ 0.32
NXF1-213ENST00000532297 FCHSD1Q86WN1 690 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 TICAM2Q86XR7 235 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 ISCA1Q9BUE6 129 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 MRFAP1Q9Y605 127 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 SHANK3Q9BYB0 1731 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 B4E1Z4 1266 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 H3BQF6 201 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 SPTLC2O15270 562 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 TCIRG1Q13488 830 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 MYSM1Q5VVJ2 828 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 PSD3Q9NYI0 1048 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 RRP15Q9Y3B9 282 aaKnown RBP17.06■□□□□ 0.32
NXF1-213ENST00000532297 MYH7P12883 1935 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 CDC27P30260 824 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 LONRF2Q1L5Z9 754 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 SPECC1Q5M775 1068 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 RALYLQ86SE5 291 aaKnown RBP17.06■□□□□ 0.32
NXF1-213ENST00000532297 RABGGTAQ92696 567 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 CLIC6Q96NY7 704 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 WWC3Q9ULE0 1092 aa17.06■□□□□ 0.32
NXF1-213ENST00000532297 PARP4Q9UKK3 1724 aaKnown RBP17.05■□□□□ 0.32
NXF1-213ENST00000532297 C4AP0C0L4 1744 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 C4BP0C0L5 1744 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 TMEM232C9JQI7 657 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 ARHGAP6O43182 974 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 BRINP3Q76B58 766 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 AKAP11Q9UKA4 1901 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 ZNF213O14771 459 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 CIAO1O76071 339 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 ITGA6P23229 1130 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 ACTN2P35609 894 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 PHKA1P46020 1223 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 IFIT5Q13325 482 aaKnown RBP17.05■□□□□ 0.32
NXF1-213ENST00000532297 SLC9C2Q5TAH2 1124 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 VSTM4Q8IW00 320 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 APPBP2Q92624 585 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 GOLGA1Q92805 767 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 ATG3Q9NT62 314 aa17.05■□□□□ 0.32
NXF1-213ENST00000532297 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
NXF1-213ENST00000532297 PFKFB1P16118 471 aa17.04■□□□□ 0.32
NXF1-213ENST00000532297 NOP2P46087 812 aaKnown RBP17.04■□□□□ 0.32
NXF1-213ENST00000532297 KIF23Q02241 960 aaPredicted RBP17.04■□□□□ 0.32
NXF1-213ENST00000532297 LDHAL6AQ6ZMR3 332 aa17.04■□□□□ 0.32
NXF1-213ENST00000532297 ZBTB9Q96C00 473 aa17.04■□□□□ 0.32
NXF1-213ENST00000532297 COL5A2P05997 1499 aaPredicted RBP17.04■□□□□ 0.32
NXF1-213ENST00000532297 DHX16O60231 1041 aaKnown RBP17.04■□□□□ 0.32
NXF1-213ENST00000532297 YEATS4O95619 227 aa17.04■□□□□ 0.32
NXF1-213ENST00000532297 IL2RBP14784 551 aa17.04■□□□□ 0.32
NXF1-213ENST00000532297 MYL5Q02045 173 aa17.04■□□□□ 0.32
NXF1-213ENST00000532297 TMEM139Q8IV31 216 aa17.04■□□□□ 0.32
NXF1-213ENST00000532297 CMTR1Q8N1G2 835 aaKnown RBP17.04■□□□□ 0.32
NXF1-213ENST00000532297 TACC3Q9Y6A5 838 aa17.04■□□□□ 0.32
NXF1-213ENST00000532297 A0A0G2JS52 829 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 LEKR1Q6ZMV7 388 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 CCDC82Q8N4S0 544 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 NCOA7Q8NI08 942 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 POLR3EQ9NVU0 708 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.03■□□□□ 0.32
NXF1-213ENST00000532297 GOLGA6L9A6NEM1 432 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 TXLNAP40222 546 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 CTDSPL2Q05D32 466 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 PIGBQ92521 554 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 DHX58Q96C10 678 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 BAG1Q99933 345 aaPredicted RBP17.03■□□□□ 0.32
NXF1-213ENST00000532297 ZKSCAN3Q9BRR0 538 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 ZSWIM4Q9H7M6 989 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 CNNM1Q9NRU3 951 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 TMOD3Q9NYL9 352 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 VPS18Q9P253 973 aa17.03■□□□□ 0.32
NXF1-213ENST00000532297 CCDC151A5D8V7 595 aa17.02■□□□□ 0.32
NXF1-213ENST00000532297 JAKMIP3Q5VZ66 844 aa17.02■□□□□ 0.32
NXF1-213ENST00000532297 PDILTQ8N807 584 aa17.02■□□□□ 0.32
NXF1-213ENST00000532297 PAPPAQ13219 1627 aa17.02■□□□□ 0.32
NXF1-213ENST00000532297 ERVV-2B6SEH9 535 aa17.02■□□□□ 0.31
NXF1-213ENST00000532297 SMIM22K7EJ46 135 aa17.02■□□□□ 0.31
NXF1-213ENST00000532297 FOXN1O15353 648 aa17.02■□□□□ 0.31
NXF1-213ENST00000532297 PNOCQ13519 176 aa17.02■□□□□ 0.31
NXF1-213ENST00000532297 AXDND1Q5T1B0 1012 aaPredicted RBP17.02■□□□□ 0.31
NXF1-213ENST00000532297 SYNE3Q6ZMZ3 975 aa17.02■□□□□ 0.31
NXF1-213ENST00000532297 DDX60Q8IY21 1712 aaKnown RBP17.02■□□□□ 0.31
NXF1-213ENST00000532297 ZNF532Q9HCE3 1301 aa17.02■□□□□ 0.31
NXF1-213ENST00000532297 MCM6Q14566 821 aa17.01■□□□□ 0.31
NXF1-213ENST00000532297 ANO1Q5XXA6 986 aa17.01■□□□□ 0.31
NXF1-213ENST00000532297 TOGARAM2Q6ZUX3 1019 aa17.01■□□□□ 0.31
NXF1-213ENST00000532297 IQUBQ8NA54 791 aa17.01■□□□□ 0.31
NXF1-213ENST00000532297 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.01■□□□□ 0.31
NXF1-213ENST00000532297 KIFC2Q96AC6 838 aa17.01■□□□□ 0.31
NXF1-213ENST00000532297 ALG1Q9BT22 464 aa17.01■□□□□ 0.31
NXF1-213ENST00000532297 TBC1D2BQ9UPU7 963 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms