RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ABCF2Q9UG63 623 aa11.53□□□□□ -0.56
NEDD8-206ENST00000531430 PTPRAP18433 802 aa11.52□□□□□ -0.57
NEDD8-206ENST00000531430 ATP2B3Q16720 1220 aa11.52□□□□□ -0.57
NEDD8-206ENST00000531430 NOL9Q5SY16 702 aaKnown RBP11.52□□□□□ -0.57
NEDD8-206ENST00000531430 CCDC84Q86UT8 332 aaPredicted RBP11.52□□□□□ -0.57
NEDD8-206ENST00000531430 SCYL3Q8IZE3 742 aa11.52□□□□□ -0.57
NEDD8-206ENST00000531430 MRPL50Q8N5N7 158 aaKnown RBP11.52□□□□□ -0.57
NEDD8-206ENST00000531430 ANKRD13CQ8N6S4 541 aa11.52□□□□□ -0.57
NEDD8-206ENST00000531430 USP44Q9H0E7 712 aa11.52□□□□□ -0.57
NEDD8-206ENST00000531430 UTYO14607 1347 aa11.52□□□□□ -0.57
NEDD8-206ENST00000531430 ADGRA2Q96PE1 1338 aa11.52□□□□□ -0.57
NEDD8-206ENST00000531430 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
NEDD8-206ENST00000531430 UBE2Q1Q7Z7E8 422 aa11.51□□□□□ -0.57
NEDD8-206ENST00000531430 DZIP1Q86YF9 867 aaKnown RBP11.51□□□□□ -0.57
NEDD8-206ENST00000531430 DENND2AQ9ULE3 1009 aa11.51□□□□□ -0.57
NEDD8-206ENST00000531430 ZMYND8Q9ULU4 1186 aaPredicted RBP11.51□□□□□ -0.57
NEDD8-206ENST00000531430 AFG3L2Q9Y4W6 797 aa11.51□□□□□ -0.57
NEDD8-206ENST00000531430 SZT2Q5T011 3432 aa11.51□□□□□ -0.57
NEDD8-206ENST00000531430 A0A0G2JLL6 359 aaPredicted RBP11.5□□□□□ -0.57
NEDD8-206ENST00000531430 PHF20L1A8MW92 1017 aa11.5□□□□□ -0.57
NEDD8-206ENST00000531430 SOX1O00570 391 aaPredicted RBP11.5□□□□□ -0.57
NEDD8-206ENST00000531430 PHKA1P46020 1223 aa11.5□□□□□ -0.57
NEDD8-206ENST00000531430 PRRT2Q7Z6L0 340 aaPredicted RBP11.5□□□□□ -0.57
NEDD8-206ENST00000531430 C7orf61Q8IZ16 206 aa11.5□□□□□ -0.57
NEDD8-206ENST00000531430 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.5□□□□□ -0.57
NEDD8-206ENST00000531430 RPAP1Q9BWH6 1393 aaPredicted RBP11.5□□□□□ -0.57
NEDD8-206ENST00000531430 DDTLA6NHG4 134 aaPredicted RBP11.49□□□□□ -0.57
NEDD8-206ENST00000531430 ENTPD3O75355 529 aa11.49□□□□□ -0.57
NEDD8-206ENST00000531430 SYN1P17600 705 aa11.49□□□□□ -0.57
NEDD8-206ENST00000531430 RFX5P48382 616 aaPredicted RBP11.49□□□□□ -0.57
NEDD8-206ENST00000531430 SPP2Q13103 211 aa11.49□□□□□ -0.57
NEDD8-206ENST00000531430 ATG9AQ7Z3C6 839 aa11.49□□□□□ -0.57
NEDD8-206ENST00000531430 SLF2Q8IX21 1173 aa11.49□□□□□ -0.57
NEDD8-206ENST00000531430 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
NEDD8-206ENST00000531430 DIS3LQ8TF46 1054 aaKnown RBP11.49□□□□□ -0.57
NEDD8-206ENST00000531430 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.49□□□□□ -0.57
NEDD8-206ENST00000531430 FAM196BA6NMK8 535 aa11.48□□□□□ -0.57
NEDD8-206ENST00000531430 CTNND1O60716 968 aaKnown RBP11.48□□□□□ -0.57
NEDD8-206ENST00000531430 UBTFL1P0CB47 393 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-206ENST00000531430 ADORA1P30542 326 aa11.48□□□□□ -0.57
NEDD8-206ENST00000531430 BTDP43251 543 aa11.48□□□□□ -0.57
NEDD8-206ENST00000531430 TIMM10P62072 90 aa11.48□□□□□ -0.57
NEDD8-206ENST00000531430 SH3BP5LQ7L8J4 393 aa11.48□□□□□ -0.57
NEDD8-206ENST00000531430 ZGPATQ8N5A5 531 aaKnown RBP11.48□□□□□ -0.57
NEDD8-206ENST00000531430 SSH1Q8WYL5 1049 aa11.48□□□□□ -0.57
NEDD8-206ENST00000531430 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.48□□□□□ -0.57
NEDD8-206ENST00000531430 PRO3102Q9H379 93 aa11.48□□□□□ -0.57
NEDD8-206ENST00000531430 HMX1Q9NP08 348 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-206ENST00000531430 PNMA3Q9UL41 463 aa11.48□□□□□ -0.57
NEDD8-206ENST00000531430 PA2G4Q9UQ80 394 aaKnown RBP11.48□□□□□ -0.57
NEDD8-206ENST00000531430 PTPRCP08575 1304 aa11.48□□□□□ -0.57
NEDD8-206ENST00000531430 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
NEDD8-206ENST00000531430 IRF5Q13568 498 aa11.47□□□□□ -0.57
NEDD8-206ENST00000531430 TREML2Q5T2D2 321 aa11.47□□□□□ -0.57
NEDD8-206ENST00000531430 SPTY2D1Q68D10 685 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-206ENST00000531430 CCDC102BQ68D86 513 aa11.47□□□□□ -0.57
NEDD8-206ENST00000531430 ERICH6Q7L0X2 663 aa11.47□□□□□ -0.57
NEDD8-206ENST00000531430 NEUROD6Q96NK8 337 aa11.47□□□□□ -0.57
NEDD8-206ENST00000531430 IDI2Q9BXS1 227 aa11.47□□□□□ -0.57
NEDD8-206ENST00000531430 DDX4Q9NQI0 724 aaKnown RBP11.47□□□□□ -0.57
NEDD8-206ENST00000531430 AGTPBP1Q9UPW5 1226 aa11.47□□□□□ -0.57
NEDD8-206ENST00000531430 RANBP2P49792 3224 aaKnown RBP11.47□□□□□ -0.57
NEDD8-206ENST00000531430 A0A1W2PPC1 479 aa11.46□□□□□ -0.57
NEDD8-206ENST00000531430 SEMA3EO15041 775 aa11.46□□□□□ -0.57
NEDD8-206ENST00000531430 CYP2B6P20813 491 aa11.46□□□□□ -0.57
NEDD8-206ENST00000531430 IL15P40933 162 aaPredicted RBP11.46□□□□□ -0.57
NEDD8-206ENST00000531430 TRIM32Q13049 653 aa11.46□□□□□ -0.57
NEDD8-206ENST00000531430 GORABQ5T7V8 394 aa11.46□□□□□ -0.57
NEDD8-206ENST00000531430 Q7L0L9 218 aa11.46□□□□□ -0.57
NEDD8-206ENST00000531430 CCAR1Q8IX12 1150 aaKnown RBP11.46□□□□□ -0.57
NEDD8-206ENST00000531430 DEFB123Q8N688 67 aa11.46□□□□□ -0.57
NEDD8-206ENST00000531430 NBPF3Q9H094 633 aa11.46□□□□□ -0.57
NEDD8-206ENST00000531430 SLC45A1Q9Y2W3 748 aa11.46□□□□□ -0.57
NEDD8-206ENST00000531430 MGAMO43451 1857 aa11.46□□□□□ -0.58
NEDD8-206ENST00000531430 CAPN2P17655 700 aa11.45□□□□□ -0.58
NEDD8-206ENST00000531430 HMGCS2P54868 508 aa11.45□□□□□ -0.58
NEDD8-206ENST00000531430 PABPC4Q13310 644 aaKnown RBP eCLIP11.45□□□□□ -0.585e-9■■■■□ 19.8
NEDD8-206ENST00000531430 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
NEDD8-206ENST00000531430 C11orf49Q9H6J7 331 aa11.45□□□□□ -0.58
NEDD8-206ENST00000531430 PAK6Q9NQU5 681 aaPredicted RBP11.45□□□□□ -0.58
NEDD8-206ENST00000531430 RAI14Q9P0K7 980 aa11.45□□□□□ -0.58
NEDD8-206ENST00000531430 DOCK3Q8IZD9 2030 aa11.45□□□□□ -0.58
NEDD8-206ENST00000531430 RPTORQ8N122 1335 aa11.44□□□□□ -0.58
NEDD8-206ENST00000531430 SALL1Q9NSC2 1324 aa11.44□□□□□ -0.58
NEDD8-206ENST00000531430 CIAO1O76071 339 aa11.44□□□□□ -0.58
NEDD8-206ENST00000531430 HMGCRP04035 888 aa11.44□□□□□ -0.58
NEDD8-206ENST00000531430 GCLCP48506 637 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-206ENST00000531430 MECOMQ03112 1051 aa11.44□□□□□ -0.58
NEDD8-206ENST00000531430 RASGRF1Q13972 1273 aa11.44□□□□□ -0.58
NEDD8-206ENST00000531430 TBC1D9Q6ZT07 1266 aa11.44□□□□□ -0.58
NEDD8-206ENST00000531430 ZNF280CQ8ND82 737 aa11.44□□□□□ -0.58
NEDD8-206ENST00000531430 UBE2OQ9C0C9 1292 aaKnown RBP11.44□□□□□ -0.58
NEDD8-206ENST00000531430 ASCC2Q9H1I8 757 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-206ENST00000531430 CWC22Q9HCG8 908 aaKnown RBP11.44□□□□□ -0.58
NEDD8-206ENST00000531430 SMC4Q9NTJ3 1288 aa11.44□□□□□ -0.58
NEDD8-206ENST00000531430 A0A0C4DFX4 3053 aa11.44□□□□□ -0.58
NEDD8-206ENST00000531430 MYH13Q9UKX3 1938 aa11.44□□□□□ -0.58
NEDD8-206ENST00000531430 USP17L5A8MUK1 530 aa11.43□□□□□ -0.58
NEDD8-206ENST00000531430 PEX10O60683 326 aa11.43□□□□□ -0.58
NEDD8-206ENST00000531430 LDHCP07864 332 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms