RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 PTPN12Q05209 780 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-219ENST00000526299 KCNMB1Q16558 191 aa6.01□□□□□ -1.45
ECHDC1-219ENST00000526299 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
ECHDC1-219ENST00000526299 HEXIM2Q96MH2 286 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-219ENST00000526299 RAP1GAPP47736 663 aa6□□□□□ -1.45
ECHDC1-219ENST00000526299 C1QL4Q86Z23 238 aa6□□□□□ -1.45
ECHDC1-219ENST00000526299 BHLHE22Q8NFJ8 381 aaPredicted RBP6□□□□□ -1.45
ECHDC1-219ENST00000526299 CCER1Q8TC90 406 aaPredicted RBP6□□□□□ -1.45
ECHDC1-219ENST00000526299 ISL2Q96A47 359 aa6□□□□□ -1.45
ECHDC1-219ENST00000526299 LIN37Q96GY3 246 aaPredicted RBP6□□□□□ -1.45
ECHDC1-219ENST00000526299 TNKS2Q9H2K2 1166 aa6□□□□□ -1.45
ECHDC1-219ENST00000526299 FAM53CQ9NYF3 392 aa6□□□□□ -1.45
ECHDC1-219ENST00000526299 BRPF3Q9ULD4 1205 aa6□□□□□ -1.45
ECHDC1-219ENST00000526299 TMEM238LA0A1B0GVL6 79 aa5.99□□□□□ -1.45
ECHDC1-219ENST00000526299 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-219ENST00000526299 CPNE3O75131 537 aaKnown RBP5.99□□□□□ -1.45
ECHDC1-219ENST00000526299 ZP2Q05996 745 aa5.99□□□□□ -1.45
ECHDC1-219ENST00000526299 IKZF1Q13422 519 aa5.99□□□□□ -1.45
ECHDC1-219ENST00000526299 RPS26P11Q5JNZ5 115 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-219ENST00000526299 TOX2Q96NM4 488 aa5.99□□□□□ -1.45
ECHDC1-219ENST00000526299 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
ECHDC1-219ENST00000526299 SSU72Q9NP77 194 aaKnown RBP5.99□□□□□ -1.45
ECHDC1-219ENST00000526299 KRT82Q9NSB4 513 aa5.99□□□□□ -1.45
ECHDC1-219ENST00000526299 SNX11Q9Y5W9 270 aa5.99□□□□□ -1.45
ECHDC1-219ENST00000526299 GADD45BO75293 160 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-219ENST00000526299 NEFLP07196 543 aa5.98□□□□□ -1.45
ECHDC1-219ENST00000526299 FYB2Q5VWT5 728 aa5.98□□□□□ -1.45
ECHDC1-219ENST00000526299 PRPF40BQ6NWY9 871 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-219ENST00000526299 LCNL1Q6ZST4 164 aa5.98□□□□□ -1.45
ECHDC1-219ENST00000526299 FAM214BQ7L5A3 538 aa5.98□□□□□ -1.45
ECHDC1-219ENST00000526299 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.98□□□□□ -1.45
ECHDC1-219ENST00000526299 KCNB2Q92953 911 aa5.98□□□□□ -1.45
ECHDC1-219ENST00000526299 CTNND2Q9UQB3 1225 aa5.98□□□□□ -1.45
ECHDC1-219ENST00000526299 ARID3CA6NKF2 412 aa5.97□□□□□ -1.45
ECHDC1-219ENST00000526299 ECM1Q16610 540 aa5.97□□□□□ -1.45
ECHDC1-219ENST00000526299 PDZD3Q86UT5 571 aa5.97□□□□□ -1.45
ECHDC1-219ENST00000526299 STK35Q8TDR2 534 aa5.97□□□□□ -1.45
ECHDC1-219ENST00000526299 CCDC74AQ96AQ1 378 aa5.97□□□□□ -1.45
ECHDC1-219ENST00000526299 ICMTO60725 284 aa5.96□□□□□ -1.46
ECHDC1-219ENST00000526299 TSPAN15O95858 294 aa5.96□□□□□ -1.46
ECHDC1-219ENST00000526299 GRM2Q14416 872 aa5.96□□□□□ -1.46
ECHDC1-219ENST00000526299 PRR23BQ6ZRT6 265 aa5.96□□□□□ -1.46
ECHDC1-219ENST00000526299 SYDE1Q6ZW31 735 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-219ENST00000526299 SPACA3Q8IXA5 215 aa5.96□□□□□ -1.46
ECHDC1-219ENST00000526299 LRRC56Q8IYG6 542 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-219ENST00000526299 ASB11Q8WXH4 323 aa5.96□□□□□ -1.46
ECHDC1-219ENST00000526299 GPN3Q9UHW5 284 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-219ENST00000526299 H3BRB1 525 aa5.95□□□□□ -1.46
ECHDC1-219ENST00000526299 EIF1AYO14602 144 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-219ENST00000526299 NKPD1Q17RQ9 610 aa5.95□□□□□ -1.46
ECHDC1-219ENST00000526299 ZC3H12AQ5D1E8 599 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-219ENST00000526299 LILRA6Q6PI73 481 aa5.95□□□□□ -1.46
ECHDC1-219ENST00000526299 RNF214Q8ND24 703 aa5.95□□□□□ -1.46
ECHDC1-219ENST00000526299 ZSCAN18Q8TBC5 510 aaPredicted RBP5.95□□□□□ -1.46
ECHDC1-219ENST00000526299 PPP1R16BQ96T49 567 aa5.95□□□□□ -1.46
ECHDC1-219ENST00000526299 FAM129BQ96TA1 746 aa5.95□□□□□ -1.46
ECHDC1-219ENST00000526299 TUT1Q9H6E5 874 aaKnown RBP5.95□□□□□ -1.46
ECHDC1-219ENST00000526299 AFMP43652 599 aa5.94□□□□□ -1.46
ECHDC1-219ENST00000526299 HNRNPUQ00839 825 aaKnown RBP eCLIP5.94□□□□□ -1.46
ECHDC1-219ENST00000526299 DTHD1Q6ZMT9 781 aa5.94□□□□□ -1.46
ECHDC1-219ENST00000526299 TMEM39AQ9NV64 488 aa5.94□□□□□ -1.46
ECHDC1-219ENST00000526299 GTF2IRD1Q9UHL9 959 aa5.94□□□□□ -1.46
ECHDC1-219ENST00000526299 TRAK1Q9UPV9 953 aa5.94□□□□□ -1.46
ECHDC1-219ENST00000526299 IGF2BP3O00425 579 aaKnown RBP eCLIP5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 NDUFB5O43674 189 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 KRT1P04264 644 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 GLI1P08151 1106 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 C1QTNF9P0C862 333 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 ZSCAN22P10073 491 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 SERPINB4P48594 390 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 FCGRTP55899 365 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 ERVK-24P63145 666 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 ARHGAP4P98171 946 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 PPP2R3AQ06190 1150 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 PDE3BQ13370 1112 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 LCE5AQ5TCM9 118 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 MAP1SQ66K74 1059 aaPredicted RBP5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 UBE3DQ7Z6J8 389 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 ANKLE2Q86XL3 938 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 GLYCTKQ8IVS8 523 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 SULF2Q8IWU5 870 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 EPS8L3Q8TE67 593 aaKnown RBP5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 NIF3L1Q9GZT8 377 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 PRDM10Q9NQV6 1147 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 EGFL7Q9UHF1 273 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 CSADQ9Y600 493 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 PITPNM2Q9BZ72 1349 aa5.93□□□□□ -1.46
ECHDC1-219ENST00000526299 GPR182O15218 404 aa5.92□□□□□ -1.46
ECHDC1-219ENST00000526299 PPM1JQ5JR12 505 aa5.92□□□□□ -1.46
ECHDC1-219ENST00000526299 MPZL3Q6UWV2 235 aa5.92□□□□□ -1.46
ECHDC1-219ENST00000526299 MPRIPQ6WCQ1 1025 aa5.92□□□□□ -1.46
ECHDC1-219ENST00000526299 GPBAR1Q8TDU6 330 aa5.92□□□□□ -1.46
ECHDC1-219ENST00000526299 KIRREL1Q96J84 757 aa5.92□□□□□ -1.46
ECHDC1-219ENST00000526299 DNAJC25Q9H1X3 360 aa5.92□□□□□ -1.46
ECHDC1-219ENST00000526299 LMCD1Q9NZU5 365 aa5.92□□□□□ -1.46
ECHDC1-219ENST00000526299 PRRG2O14669 202 aa5.91□□□□□ -1.46
ECHDC1-219ENST00000526299 IGHA2P01877 340 aa5.91□□□□□ -1.46
ECHDC1-219ENST00000526299 ARNTP27540 789 aa5.91□□□□□ -1.46
ECHDC1-219ENST00000526299 NTF4P34130 210 aa5.91□□□□□ -1.46
ECHDC1-219ENST00000526299 CYFIP1Q7L576 1253 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms