RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 ARFGAP3Q9NP61 516 aa20.9■□□□□ 0.94
PCDHB18P-201ENST00000524813 BMP6P22004 513 aa20.89■□□□□ 0.94
PCDHB18P-201ENST00000524813 RAD51AP2Q09MP3 1159 aa20.89■□□□□ 0.94
PCDHB18P-201ENST00000524813 CCDC102BQ68D86 513 aa20.89■□□□□ 0.94
PCDHB18P-201ENST00000524813 KRT40Q6A162 431 aa20.89■□□□□ 0.94
PCDHB18P-201ENST00000524813 KRBA2Q6ZNG9 492 aa20.89■□□□□ 0.94
PCDHB18P-201ENST00000524813 CNNM3Q8NE01 707 aa20.89■□□□□ 0.94
PCDHB18P-201ENST00000524813 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.89■□□□□ 0.94
PCDHB18P-201ENST00000524813 KIFC2Q96AC6 838 aa20.89■□□□□ 0.94
PCDHB18P-201ENST00000524813 MAP3K14Q99558 947 aa20.89■□□□□ 0.94
PCDHB18P-201ENST00000524813 PCDH11XQ9BZA7 1347 aa20.89■□□□□ 0.93
PCDHB18P-201ENST00000524813 PCDH11YQ9BZA8 1340 aa20.89■□□□□ 0.93
PCDHB18P-201ENST00000524813 STX10O60499 249 aa20.89■□□□□ 0.93
PCDHB18P-201ENST00000524813 ADKP55263 362 aaKnown RBP20.89■□□□□ 0.93
PCDHB18P-201ENST00000524813 SLC20A2Q08357 652 aa20.89■□□□□ 0.93
PCDHB18P-201ENST00000524813 ZNF213O14771 459 aa20.88■□□□□ 0.93
PCDHB18P-201ENST00000524813 TC2NQ8N9U0 490 aa20.88■□□□□ 0.93
PCDHB18P-201ENST00000524813 RABGGTAQ92696 567 aa20.88■□□□□ 0.93
PCDHB18P-201ENST00000524813 DCAF5Q96JK2 942 aa20.88■□□□□ 0.93
PCDHB18P-201ENST00000524813 PUS3Q9BZE2 481 aaKnown RBP20.88■□□□□ 0.93
PCDHB18P-201ENST00000524813 KCNH3Q9ULD8 1083 aa20.88■□□□□ 0.93
PCDHB18P-201ENST00000524813 PLEKHG2Q9H7P9 1386 aa20.88■□□□□ 0.93
PCDHB18P-201ENST00000524813 GPS2Q13227 327 aa20.88■□□□□ 0.93
PCDHB18P-201ENST00000524813 ZMYM6O95789 1325 aa20.88■□□□□ 0.93
PCDHB18P-201ENST00000524813 FOXN1O15353 648 aa20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 ZFYP08048 801 aaPredicted RBP20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 TTC39AQ5SRH9 613 aa20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 RGS22Q8NE09 1264 aa20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 GOLGA1Q92805 767 aa20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 DHX58Q96C10 678 aa20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 FUT8Q9BYC5 575 aa20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 PUS7LQ9H0K6 701 aaKnown RBP20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 CWC25Q9NXE8 425 aaPredicted RBP20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 SPEF2Q9C093 1822 aa20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 C4AP0C0L4 1744 aa20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 C4BP0C0L5 1744 aa20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 CUTAO60888 179 aa20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 RXRAP19793 462 aa20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 SPECC1LQ69YQ0 1117 aa20.87■□□□□ 0.93
PCDHB18P-201ENST00000524813 METAP2P50579 478 aaKnown RBP eCLIP20.86■□□□□ 0.93
PCDHB18P-201ENST00000524813 MUM1L1Q5H9M0 696 aa20.86■□□□□ 0.93
PCDHB18P-201ENST00000524813 PHKBQ93100 1093 aa20.86■□□□□ 0.93
PCDHB18P-201ENST00000524813 DESI2Q9BSY9 194 aa20.86■□□□□ 0.93
PCDHB18P-201ENST00000524813 WDR19Q8NEZ3 1342 aa20.86■□□□□ 0.93
PCDHB18P-201ENST00000524813 ADORA1P30542 326 aa20.86■□□□□ 0.93
PCDHB18P-201ENST00000524813 KARSQ15046 597 aaKnown RBP20.86■□□□□ 0.93
PCDHB18P-201ENST00000524813 TSPYL1Q9H0U9 437 aa20.86■□□□□ 0.93
PCDHB18P-201ENST00000524813 CEP126Q9P2H0 1117 aa20.86■□□□□ 0.93
PCDHB18P-201ENST00000524813 DENND2AQ9ULE3 1009 aa20.86■□□□□ 0.93
PCDHB18P-201ENST00000524813 CIAO1O76071 339 aa20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 APPBP2Q92624 585 aa20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 FEZ2Q9UHY8 353 aaPredicted RBP20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 CDKL5O76039 1030 aa20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 TXLNAP40222 546 aa20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 GYS2P54840 703 aa20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 FMR1Q06787 632 aaKnown RBP eCLIP20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 SPECC1Q5M775 1068 aa20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 CCDC12Q8WUD4 166 aaPredicted RBP20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 MAN1B1Q9UKM7 699 aa20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 ANGEL1Q9UNK9 670 aaKnown RBP20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 NFE2L3Q9Y4A8 694 aa20.85■□□□□ 0.93
PCDHB18P-201ENST00000524813 GPAA1O43292 621 aa20.84■□□□□ 0.93
PCDHB18P-201ENST00000524813 CABP4P57796 275 aa20.84■□□□□ 0.93
PCDHB18P-201ENST00000524813 MDM2Q00987 491 aaPredicted RBP20.84■□□□□ 0.93
PCDHB18P-201ENST00000524813 SCARF1Q14162 830 aa20.84■□□□□ 0.93
PCDHB18P-201ENST00000524813 LONRF2Q1L5Z9 754 aa20.84■□□□□ 0.93
PCDHB18P-201ENST00000524813 NRAPQ86VF7 1730 aa20.84■□□□□ 0.93
PCDHB18P-201ENST00000524813 DDX60Q8IY21 1712 aaKnown RBP20.84■□□□□ 0.93
PCDHB18P-201ENST00000524813 ZNF18P17022 549 aa20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 TTLL7Q6ZT98 887 aa20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 NKX2-3Q8TAU0 364 aa20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 XAGE2Q96GT9 111 aa20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 NBPF3Q9H094 633 aa20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 NBPF26B4DH59 902 aa20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 ZAP70P43403 619 aa20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 TRDNQ13061 729 aa20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 NBPF14Q5TI25 921 aa20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 NBPF10Q6P3W6 841 aaKnown RBP20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 CYB5R4Q7L1T6 521 aa20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 NBPF15Q8N660 670 aa20.83■□□□□ 0.93
PCDHB18P-201ENST00000524813 WNK3Q9BYP7 1800 aa20.83■□□□□ 0.92
PCDHB18P-201ENST00000524813 MTF1Q14872 753 aa20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 ZSCAN26Q16670 478 aa20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 JAKMIP3Q5VZ66 844 aa20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 TRMT44Q8IYL2 757 aaKnown RBP20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 ZSWIM4Q9H7M6 989 aa20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 MRPL44Q9H9J2 332 aaKnown RBP20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 HOOK1Q9UJC3 728 aaKnown RBP20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 TOGARAM1Q9Y4F4 1720 aa20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 H3BQF6 201 aa20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 TRIM29Q14134 588 aa20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 CPLX2Q6PUV4 134 aaKnown RBP20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 KRI1Q8N9T8 703 aaKnown RBP20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 AK7Q96M32 723 aa20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 IRX2Q9BZI1 471 aaPredicted RBP20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 RAI14Q9P0K7 980 aa20.82■□□□□ 0.92
PCDHB18P-201ENST00000524813 CCDC151A5D8V7 595 aa20.81■□□□□ 0.92
PCDHB18P-201ENST00000524813 SH2B2O14492 632 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms