RNA–Protein interactions for RNA: ENST00000522480.5

SMG1P3-205, Transcript of SMG1 pseudogene 3, humanhuman

BASIC

Gene SMG1P3, Length 4,262 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-205ENST00000522480 PPARAQ07869 468 aa12.78□□□□□ -0.36
SMG1P3-205ENST00000522480 JAKMIP1Q96N16 626 aaKnown RBP12.78□□□□□ -0.36
SMG1P3-205ENST00000522480 ZNF541Q9H0D2 1346 aa12.78□□□□□ -0.36
SMG1P3-205ENST00000522480 SCNN1DP51172 638 aa12.78□□□□□ -0.36
SMG1P3-205ENST00000522480 ARHGAP27Q6ZUM4 889 aa12.78□□□□□ -0.36
SMG1P3-205ENST00000522480 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
SMG1P3-205ENST00000522480 ZC3H4Q9UPT8 1303 aaKnown RBP12.78□□□□□ -0.36
SMG1P3-205ENST00000522480 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.78□□□□□ -0.361e-9■□□□□ 8.3
SMG1P3-205ENST00000522480 F8W031 263 aaPredicted RBP12.77□□□□□ -0.36
SMG1P3-205ENST00000522480 CASTP20810 708 aaKnown RBP12.77□□□□□ -0.36
SMG1P3-205ENST00000522480 TDO2P48775 406 aa12.77□□□□□ -0.36
SMG1P3-205ENST00000522480 MCM2P49736 904 aa12.77□□□□□ -0.36
SMG1P3-205ENST00000522480 ATRNL1Q5VV63 1379 aa12.77□□□□□ -0.36
SMG1P3-205ENST00000522480 ST18O60284 1047 aa12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 EIF6P56537 245 aaKnown RBP12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 CFAP100Q494V2 611 aa12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 C12orf60Q5U649 245 aa12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 TEX11Q8IYF3 940 aa12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 HDAC9Q9UKV0 1011 aa12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 PAPPA2Q9BXP8 1791 aa12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 SPDYE2BA6NHP3 402 aa12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 APPP05067 770 aa12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 SPDYE6P0CI01 402 aa12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 MTA3Q9BTC8 594 aa12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 CYP46A1Q9Y6A2 500 aa12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 NEDD4P46934 1319 aa12.77□□□□□ -0.37
SMG1P3-205ENST00000522480 AKNAD1Q5T1N1 836 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 USP17L8P0C7I0 530 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 PCDHAC2Q9Y5I4 1007 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 ATAD5Q96QE3 1844 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 ORC4O43929 436 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 NEK4P51957 841 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 BLOC1S2Q6QNY1 142 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 GPC2Q8N158 579 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 NCOA7Q8NI08 942 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 TGFBRAP1Q8WUH2 860 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 CNNM2Q9H8M5 875 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 BECN1Q14457 450 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 FKBP1CQ5VVH2 108 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 DHX32Q7L7V1 743 aaKnown RBP12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 DDX4Q9NQI0 724 aaKnown RBP12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 USP40Q9NVE5 1235 aa12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
SMG1P3-205ENST00000522480 USP5P45974 858 aa12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 K7ELQ4 463 aaPredicted RBP12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 HAND2P61296 217 aa12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 CTDSPL2Q05D32 466 aa12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 TOB2Q14106 344 aaPredicted RBP12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 SPDYE2Q495Y8 402 aa12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 OSBPL5Q9H0X9 879 aaPredicted RBP12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 RNF41Q9H4P4 317 aaPredicted RBP12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 USP17L12C9JPN9 530 aa12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 USP17L21D6R901 530 aa12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 EVCP57679 992 aa12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 ANTXR2P58335 489 aa12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 NKX2-3Q8TAU0 364 aa12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 KRT23Q9C075 422 aa12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 PDRG1Q9NUG6 133 aa12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 FAM198AQ9UFP1 575 aa12.75□□□□□ -0.37
SMG1P3-205ENST00000522480 ENTPD3O75355 529 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 METTL16Q86W50 562 aaKnown RBP12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 PRMT6Q96LA8 375 aaPredicted RBP12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 UPF3BQ9BZI7 483 aaKnown RBP12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 GRIN3BO60391 1043 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 AK2P54819 239 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 EHD4Q9H223 541 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 CNTNAP1P78357 1384 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 GABPAQ06546 454 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 MYOZ2Q9NPC6 264 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 NID2Q14112 1375 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 PLIN4Q96Q06 1357 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 GMPSP49915 693 aaPredicted RBP12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 C16orf86Q6ZW13 317 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 MAPKAPK5Q8IW41 473 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 HSCBQ8IWL3 235 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 MCM9Q9NXL9 1143 aa12.74□□□□□ -0.37
SMG1P3-205ENST00000522480 CPA1P15085 419 aa12.73□□□□□ -0.37
SMG1P3-205ENST00000522480 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
SMG1P3-205ENST00000522480 MFSD6Q6ZSS7 791 aa12.73□□□□□ -0.37
SMG1P3-205ENST00000522480 PGAP2Q9UHJ9 254 aa12.73□□□□□ -0.37
SMG1P3-205ENST00000522480 CYP2D6P10635 497 aa12.73□□□□□ -0.37
SMG1P3-205ENST00000522480 EVX2Q03828 476 aa12.73□□□□□ -0.37
SMG1P3-205ENST00000522480 CUL4AQ13619 759 aa12.73□□□□□ -0.37
SMG1P3-205ENST00000522480 CYB5R4Q7L1T6 521 aa12.73□□□□□ -0.37
SMG1P3-205ENST00000522480 OGFOD1Q8N543 542 aa12.73□□□□□ -0.37
SMG1P3-205ENST00000522480 CYP2D7A0A087X1C5 515 aa12.73□□□□□ -0.37
SMG1P3-205ENST00000522480 SMIM22K7EJ46 135 aa12.73□□□□□ -0.37
SMG1P3-205ENST00000522480 ZNF70Q9UC06 446 aaPredicted RBP12.73□□□□□ -0.37
SMG1P3-205ENST00000522480 MCM5P33992 734 aa12.72□□□□□ -0.37
SMG1P3-205ENST00000522480 DLGAP5Q15398 846 aa12.72□□□□□ -0.37
SMG1P3-205ENST00000522480 PLCD1P51178 756 aa12.72□□□□□ -0.37
SMG1P3-205ENST00000522480 NFIAQ12857 509 aa12.72□□□□□ -0.37
SMG1P3-205ENST00000522480 DHX36Q9H2U1 1008 aaKnown RBP12.72□□□□□ -0.37
SMG1P3-205ENST00000522480 MYH4Q9Y623 1939 aa12.72□□□□□ -0.37
SMG1P3-205ENST00000522480 SHTN1A0MZ66 631 aa12.71□□□□□ -0.37
SMG1P3-205ENST00000522480 WNT10BO00744 389 aa12.71□□□□□ -0.37
SMG1P3-205ENST00000522480 SLC3A2P08195 630 aaKnown RBP12.71□□□□□ -0.37
SMG1P3-205ENST00000522480 C9orf131Q5VYM1 1079 aa12.71□□□□□ -0.37
SMG1P3-205ENST00000522480 L3MBTL3Q96JM7 780 aaPredicted RBP12.71□□□□□ -0.37
SMG1P3-205ENST00000522480 TMEM87BQ96K49 555 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms