RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 MMP14P50281 582 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 TBC1D10CQ8IV04 446 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 GPC2Q8N158 579 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 ZSWIM6Q9HCJ5 1215 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 CYP46A1Q9Y6A2 500 aa25.37■■□□□ 1.65
R3HCC1-208ENST00000522012 CPA1P15085 419 aa25.36■■□□□ 1.65
R3HCC1-208ENST00000522012 ZNF280AP59817 542 aaPredicted RBP25.36■■□□□ 1.65
R3HCC1-208ENST00000522012 SLC4A8Q2Y0W8 1093 aa25.36■■□□□ 1.65
R3HCC1-208ENST00000522012 BLOC1S2Q6QNY1 142 aa25.36■■□□□ 1.65
R3HCC1-208ENST00000522012 MICALL2Q8IY33 904 aa25.36■■□□□ 1.65
R3HCC1-208ENST00000522012 AMOTL1Q8IY63 956 aa25.36■■□□□ 1.65
R3HCC1-208ENST00000522012 STK11IPQ8N1F8 1099 aa25.36■■□□□ 1.65
R3HCC1-208ENST00000522012 MYOZ2Q9NPC6 264 aa25.36■■□□□ 1.65
R3HCC1-208ENST00000522012 CNOT7Q9UIV1 285 aaKnown RBP25.36■■□□□ 1.65
R3HCC1-208ENST00000522012 ST18O60284 1047 aa25.35■■□□□ 1.65
R3HCC1-208ENST00000522012 POLR3DP05423 398 aaPredicted RBP25.35■■□□□ 1.65
R3HCC1-208ENST00000522012 CYP2D6P10635 497 aa25.35■■□□□ 1.65
R3HCC1-208ENST00000522012 CACNB3P54284 484 aa25.35■■□□□ 1.65
R3HCC1-208ENST00000522012 SBK1Q52WX2 424 aa25.35■■□□□ 1.65
R3HCC1-208ENST00000522012 RBM26Q5T8P6 1007 aaKnown RBP25.35■■□□□ 1.65
R3HCC1-208ENST00000522012 C1QTNF8P60827 252 aa25.34■■□□□ 1.65
R3HCC1-208ENST00000522012 RUFY3Q7L099 469 aa25.34■■□□□ 1.65
R3HCC1-208ENST00000522012 MTMR14Q8NCE2 650 aa25.34■■□□□ 1.65
R3HCC1-208ENST00000522012 DDX4Q9NQI0 724 aaKnown RBP25.34■■□□□ 1.65
R3HCC1-208ENST00000522012 ANAPC4Q9UJX5 808 aa25.34■■□□□ 1.65
R3HCC1-208ENST00000522012 ADAMTSL1Q8N6G6 1762 aa25.34■■□□□ 1.65
R3HCC1-208ENST00000522012 TRDNQ13061 729 aa25.33■■□□□ 1.65
R3HCC1-208ENST00000522012 AKNAD1Q5T1N1 836 aa25.33■■□□□ 1.65
R3HCC1-208ENST00000522012 INCENPQ9NQS7 918 aa25.33■■□□□ 1.65
R3HCC1-208ENST00000522012 SMIM22K7EJ46 135 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 DDNO94850 711 aaPredicted RBP25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 HMGB1P09429 215 aaKnown RBP25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 NFIAQ12857 509 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 C12orf60Q5U649 245 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 MFSD6Q6ZSS7 791 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 RALYLQ86SE5 291 aaKnown RBP25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 NCOA7Q8NI08 942 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 PDRG1Q9NUG6 133 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 TMOD2Q9NZR1 351 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 CLRN2A0PK11 232 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 H7C1D1 291 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 SLC3A2P08195 630 aaKnown RBP25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 RPS6KB1P23443 525 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 EVX2Q03828 476 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 COL9A3Q14050 684 aaPredicted RBP25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 STAG1Q8WVM7 1258 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 IDI2Q9BXS1 227 aa25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 RNF41Q9H4P4 317 aaPredicted RBP25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 ZNF70Q9UC06 446 aaPredicted RBP25.32■■□□□ 1.64
R3HCC1-208ENST00000522012 MYO1BO43795 1136 aa25.31■■□□□ 1.64
R3HCC1-208ENST00000522012 TCP10Q12799 353 aa25.31■■□□□ 1.64
R3HCC1-208ENST00000522012 BECN1Q14457 450 aa25.31■■□□□ 1.64
R3HCC1-208ENST00000522012 SAMD7Q7Z3H4 446 aa25.31■■□□□ 1.64
R3HCC1-208ENST00000522012 SNX21Q969T3 373 aa25.31■■□□□ 1.64
R3HCC1-208ENST00000522012 ZBED3Q96IU2 234 aaPredicted RBP25.31■■□□□ 1.64
R3HCC1-208ENST00000522012 TOMM22Q9NS69 142 aa25.31■■□□□ 1.64
R3HCC1-208ENST00000522012 TACC3Q9Y6A5 838 aa25.31■■□□□ 1.64
R3HCC1-208ENST00000522012 WNT10BO00744 389 aa25.3■■□□□ 1.64
R3HCC1-208ENST00000522012 CD2BP2O95400 341 aaKnown RBP25.3■■□□□ 1.64
R3HCC1-208ENST00000522012 NBPF9Q3BBW0 867 aa25.3■■□□□ 1.64
R3HCC1-208ENST00000522012 TBC1D10BQ4KMP7 808 aaPredicted RBP25.3■■□□□ 1.64
R3HCC1-208ENST00000522012 HSCBQ8IWL3 235 aa25.3■■□□□ 1.64
R3HCC1-208ENST00000522012 OSBPL5Q9H0X9 879 aaPredicted RBP25.3■■□□□ 1.64
R3HCC1-208ENST00000522012 GPRC5DQ9NZD1 345 aa25.3■■□□□ 1.64
R3HCC1-208ENST00000522012 FAM198AQ9UFP1 575 aa25.3■■□□□ 1.64
R3HCC1-208ENST00000522012 NEDD4P46934 1319 aa25.29■■□□□ 1.64
R3HCC1-208ENST00000522012 PLCD1P51178 756 aa25.29■■□□□ 1.64
R3HCC1-208ENST00000522012 SPDYE2Q495Y8 402 aa25.29■■□□□ 1.64
R3HCC1-208ENST00000522012 RRP12Q5JTH9 1297 aaKnown RBP25.29■■□□□ 1.64
R3HCC1-208ENST00000522012 DPY19L2Q6NUT2 758 aa25.29■■□□□ 1.64
R3HCC1-208ENST00000522012 DHX32Q7L7V1 743 aaKnown RBP25.29■■□□□ 1.64
R3HCC1-208ENST00000522012 IL27Q8NEV9 243 aa25.29■■□□□ 1.64
R3HCC1-208ENST00000522012 TCEANC2Q96MN5 208 aa25.29■■□□□ 1.64
R3HCC1-208ENST00000522012 TBC1D2Q9BYX2 928 aa25.29■■□□□ 1.64
R3HCC1-208ENST00000522012 CNNM2Q9H8M5 875 aa25.29■■□□□ 1.64
R3HCC1-208ENST00000522012 B4E1Z4 1266 aa25.28■■□□□ 1.64
R3HCC1-208ENST00000522012 TCP10L2B9ZVM9 353 aa25.28■■□□□ 1.64
R3HCC1-208ENST00000522012 EGFRP00533 1210 aa25.28■■□□□ 1.64
R3HCC1-208ENST00000522012 ZFPM1Q8IX07 1006 aa25.28■■□□□ 1.64
R3HCC1-208ENST00000522012 TTC14Q96N46 770 aa25.28■■□□□ 1.64
R3HCC1-208ENST00000522012 IPO9Q96P70 1041 aaKnown RBP25.28■■□□□ 1.64
R3HCC1-208ENST00000522012 KRT23Q9C075 422 aa25.28■■□□□ 1.64
R3HCC1-208ENST00000522012 VEZTQ9HBM0 779 aa25.28■■□□□ 1.64
R3HCC1-208ENST00000522012 SBF1O95248 1867 aa25.28■■□□□ 1.64
R3HCC1-208ENST00000522012 NPM3O75607 178 aaKnown RBP25.27■■□□□ 1.64
R3HCC1-208ENST00000522012 KIF4BQ2VIQ3 1234 aa25.27■■□□□ 1.64
R3HCC1-208ENST00000522012 TTC6Q86TZ1 520 aa25.27■■□□□ 1.64
R3HCC1-208ENST00000522012 MB21D2Q8IYB1 491 aaPredicted RBP25.27■■□□□ 1.64
R3HCC1-208ENST00000522012 DYNLL2Q96FJ2 89 aa25.27■■□□□ 1.64
R3HCC1-208ENST00000522012 PDE4BQ07343 736 aa25.27■■□□□ 1.64
R3HCC1-208ENST00000522012 NOL8Q76FK4 1167 aaKnown RBP25.27■■□□□ 1.64
R3HCC1-208ENST00000522012 CHST3Q7LGC8 479 aa25.27■■□□□ 1.64
R3HCC1-208ENST00000522012 ZSCAN29Q8IWY8 852 aaPredicted RBP25.27■■□□□ 1.64
R3HCC1-208ENST00000522012 DAXXQ9UER7 740 aaPredicted RBP25.27■■□□□ 1.64
R3HCC1-208ENST00000522012 ENTPD3O75355 529 aa25.26■■□□□ 1.63
R3HCC1-208ENST00000522012 PRDM1O75626 825 aa25.26■■□□□ 1.63
R3HCC1-208ENST00000522012 PCP11498 1178 aaKnown RBP25.26■■□□□ 1.63
R3HCC1-208ENST00000522012 LMOD1P29536 600 aaPredicted RBP25.26■■□□□ 1.63
R3HCC1-208ENST00000522012 MCM5P33992 734 aa25.26■■□□□ 1.63
R3HCC1-208ENST00000522012 EPS15P42566 896 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms