RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 TPM4P67936 248 aa15.96■□□□□ 0.15
PCDHA2-202ENST00000520672 IMMTQ16891 758 aaKnown RBP15.96■□□□□ 0.15
PCDHA2-202ENST00000520672 AMIGO3Q86WK7 504 aa15.96■□□□□ 0.15
PCDHA2-202ENST00000520672 ZNF652Q9Y2D9 606 aa15.96■□□□□ 0.15
PCDHA2-202ENST00000520672 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.15
PCDHA2-202ENST00000520672 FOXP2O15409 715 aa15.96■□□□□ 0.14
PCDHA2-202ENST00000520672 RXRAP19793 462 aa15.96■□□□□ 0.14
PCDHA2-202ENST00000520672 GYG1P46976 350 aa15.96■□□□□ 0.14
PCDHA2-202ENST00000520672 CHRNDQ07001 517 aa15.96■□□□□ 0.14
PCDHA2-202ENST00000520672 LRRFIP1Q32MZ4 808 aaKnown RBP15.96■□□□□ 0.14
PCDHA2-202ENST00000520672 CACTINQ8WUQ7 758 aaKnown RBP15.96■□□□□ 0.14
PCDHA2-202ENST00000520672 ZNF213O14771 459 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 ZNF165P49910 485 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 PTPN14Q15678 1187 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 NOM1Q5C9Z4 860 aaKnown RBP15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 ERO1AQ96HE7 468 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 SPATA32Q96LK8 384 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 CLIP2Q9UDT6 1046 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 CCNL1Q9UK58 526 aaPredicted RBP15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 NUP98P52948 1817 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 PLCH1Q4KWH8 1693 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 NR1I2O75469 434 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 MAP2K2P36507 400 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 ARID5BQ14865 1188 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 CCDC144BQ3MJ40 725 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 CCDC144CPQ8IYA2 1237 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 SPATA5Q8NB90 893 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 AIDAQ96BJ3 306 aa15.95■□□□□ 0.14
PCDHA2-202ENST00000520672 PDE6AP16499 860 aa15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 PARP10Q53GL7 1025 aa15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 RALYLQ86SE5 291 aaKnown RBP15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 BICD2Q8TD16 824 aa15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 LRP6O75581 1613 aa15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 SLIT2O94813 1529 aa15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 OAS2P29728 719 aaKnown RBP15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 ZNF75DP51815 510 aa15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 ARHGAP29Q52LW3 1261 aa15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 FOXR1Q6PIV2 292 aa15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 SLC51AQ86UW1 340 aa15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 NKX2-3Q8TAU0 364 aa15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 ARMT1Q9H993 441 aa15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 LRP2BPQ9P2M1 347 aa15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.94■□□□□ 0.14
PCDHA2-202ENST00000520672 SLU7O95391 586 aaKnown RBP15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 ZFYP08048 801 aaPredicted RBP15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 ADD2P35612 726 aa15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 VPS72Q15906 364 aa15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 RRP12Q5JTH9 1297 aaKnown RBP15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 OTUD7BQ6GQQ9 843 aa15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 VPS37DQ86XT2 251 aa15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 ANKRD20A12PQ8NF67 263 aa15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 PRKAB2O43741 272 aa15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 ZPR1O75312 459 aa15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 BIRC2Q13490 618 aa15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 CELF1Q92879 486 aaKnown RBP15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 PLCD4Q9BRC7 762 aa15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 MROH5Q6ZUA9 1318 aa15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 NBPF5PQ86XG9 351 aaPredicted RBP15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 FBXO18Q8NFZ0 1043 aa15.93■□□□□ 0.14
PCDHA2-202ENST00000520672 PRC1O43663 620 aa15.92■□□□□ 0.14
PCDHA2-202ENST00000520672 MBD4O95243 580 aa15.92■□□□□ 0.14
PCDHA2-202ENST00000520672 MAP2K1Q02750 393 aaPredicted RBP15.92■□□□□ 0.14
PCDHA2-202ENST00000520672 ANKRD18AQ8IVF6 992 aa15.92■□□□□ 0.14
PCDHA2-202ENST00000520672 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCDHA2-202ENST00000520672 JCADQ9P266 1359 aa15.92■□□□□ 0.14
PCDHA2-202ENST00000520672 PTPDC1A2A3K4 754 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 LRCH2Q5VUJ6 765 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 TMCO3Q6UWJ1 677 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 PLA2G4DQ86XP0 818 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 CALR3Q96L12 384 aaKnown RBP15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 SETDB2Q96T68 719 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 GJB4Q9NTQ9 266 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 RFX7Q2KHR2 1363 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 BCL9LQ86UU0 1499 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 KLF18A0A0U1RQI7 1052 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 HMGB1P09429 215 aaKnown RBP15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 PDCP20941 246 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 CTDSPL2Q05D32 466 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 FTOQ9C0B1 505 aaKnown RBP eCLIP15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 SH3BP1Q9Y3L3 701 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 CCDC189A1A4V9 331 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 B4E1Z4 1266 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 EIF3CLB5ME19 914 aaKnown RBP15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 UQCRFS1P1P0C7P4 283 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 FGFR2P21802 821 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 FILIP1Q7Z7B0 1213 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 TICAM2Q86XR7 235 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 LEO1Q8WVC0 666 aaPredicted RBP15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 EIF3CQ99613 913 aaKnown RBP15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 TFCP2L1Q9NZI6 479 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 RAI14Q9P0K7 980 aa15.91■□□□□ 0.14
PCDHA2-202ENST00000520672 MAGEA9P43362 315 aa15.9■□□□□ 0.14
PCDHA2-202ENST00000520672 EXOSC10Q01780 885 aaKnown RBP15.9■□□□□ 0.14
PCDHA2-202ENST00000520672 MAP3K12Q12852 859 aa15.9■□□□□ 0.14
PCDHA2-202ENST00000520672 TRDNQ13061 729 aa15.9■□□□□ 0.14
PCDHA2-202ENST00000520672 TTF1Q15361 905 aaPredicted RBP15.9■□□□□ 0.14
PCDHA2-202ENST00000520672 RPAINQ86UA6 219 aa15.9■□□□□ 0.14
PCDHA2-202ENST00000520672 CDC5LQ99459 802 aaKnown RBP15.9■□□□□ 0.14
PCDHA2-202ENST00000520672 H2AFXP16104 143 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms