RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 HOXB7P09629 217 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 RPS6KB1P23443 525 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 CCDC186Q7Z3E2 898 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 MICAL1Q8TDZ2 1067 aa13.57□□□□□ -0.24
ERGIC1-208ENST00000520399 BLMP54132 1417 aaPredicted RBP13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 BICDL2A1A5D9 508 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 ATP2A2P16615 1042 aaKnown RBP13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 SYT1P21579 422 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 PEX19P40855 299 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 CFAP74Q9C0B2 1584 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 ARHGEF10O15013 1369 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 IRX1P78414 480 aaPredicted RBP13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 LACTBP83111 547 aaPredicted RBP13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 TNNI3KQ59H18 835 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 CCDC89Q8N998 374 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 ATRIPQ8WXE1 791 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 FPGT-TNNI3KV9GXZ4 949 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 CEP104O60308 925 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 GAS8O95995 478 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 ATL3Q6DD88 541 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 RAB3IPQ96QF0 476 aaPredicted RBP13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 SH3GL3Q99963 347 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 TXNDC16Q9P2K2 825 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 PARP3Q9Y6F1 533 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 GSTA5Q7RTV2 222 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 FAM76AQ8TAV0 307 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 TACO1Q9BSH4 297 aaKnown RBP13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 FAM169AQ9Y6X4 670 aa13.56□□□□□ -0.24
ERGIC1-208ENST00000520399 HSP90AA4PQ58FG1 418 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 EFCAB13Q8IY85 973 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 UBAP1LF5GYI3 381 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 MCM7P33993 719 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 CCDC129Q6ZRS4 1044 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 OGFOD1Q8N543 542 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 SPAG5Q96R06 1193 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 RRP15Q9Y3B9 282 aaKnown RBP13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 STMN1P16949 149 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 PRIM1P49642 420 aaKnown RBP13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 CCDC92Q53HC0 331 aaPredicted RBP13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 ZNF790Q6PG37 636 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 PPFIBP2Q8ND30 876 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 DDX27Q96GQ7 796 aaKnown RBP13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 INSRP06213 1382 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 KRT79Q5XKE5 535 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 AFAP1L1Q8TED9 768 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 RFC1P35251 1148 aaPredicted RBP13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 ERCC6LQ2NKX8 1250 aa13.55□□□□□ -0.24
ERGIC1-208ENST00000520399 CTAGE15A4D2H0 777 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 SPDYE3A6NKU9 549 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 SLC27A2O14975 620 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 LUC7L3O95232 432 aaKnown RBP13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 MBD4O95243 580 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 CTAGE8P0CG41 777 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 CNGA1P29973 690 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 CTAGE6Q86UF2 777 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 CTAGE4Q8IX94 777 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 ARFGAP2Q8N6H7 521 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 PHACTR2O75167 634 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 PCK1P35558 622 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 TAF12Q16514 161 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 EYA3Q99504 573 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 TRIM4Q9C037 500 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 TRIM35Q9UPQ4 493 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 GNA11P29992 359 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 MAP7Q14244 749 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 CEP85LQ5SZL2 805 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 NAP1L4Q99733 375 aaKnown RBP13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 TRIM7Q9C029 511 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 EYA2O00167 538 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 ITGA6P23229 1130 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 SPATS2Q86XZ4 545 aaKnown RBP13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 EPSTI1Q96J88 318 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 ZSWIM4Q9H7M6 989 aa13.54□□□□□ -0.24
ERGIC1-208ENST00000520399 PFDN1O60925 122 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 VTI1AQ96AJ9 217 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 NBPF3Q9H094 633 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 SEC24BO95487 1268 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 KRT83P78385 493 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 PUM3Q15397 648 aaKnown RBP13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 TSNAXIP1Q2TAA8 658 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 CDCA7Q9BWT1 371 aaPredicted RBP13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 TACC3Q9Y6A5 838 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 PARP1P09874 1014 aaKnown RBP13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 GBP7Q8N8V2 638 aaPredicted RBP13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 DNAI1Q9UI46 699 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 RXRAP19793 462 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 SETDB1Q15047 1291 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 MSANTD4Q8NCY6 345 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 SELENOSQ9BQE4 189 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 ZC3H12CQ9C0D7 883 aaKnown RBP13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 SLC52A2Q9HAB3 445 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 USP19O94966 1318 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 ELP1O95163 1332 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 FAM13AO94988 1023 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 TNNI2P48788 182 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 CUL4BQ13620 913 aa13.53□□□□□ -0.24
ERGIC1-208ENST00000520399 CHL1O00533 1208 aa13.52□□□□□ -0.24
ERGIC1-208ENST00000520399 RIMBP2O15034 1052 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms