RNA–Protein interactions for RNA: ENST00000519824.6

FAM49B-215, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-215ENST00000519824 CTDNEP1O95476 244 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 DPCR1Q3MIW9 517 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 FBXO18Q8NFZ0 1043 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 BLZF1Q9H2G9 400 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 HOOK1Q9UJC3 728 aaKnown RBP14.32□□□□□ -0.12
FAM49B-215ENST00000519824 CASP7P55210 303 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 SMYD4Q8IYR2 804 aaPredicted RBP14.32□□□□□ -0.12
FAM49B-215ENST00000519824 CCDC112Q8NEF3 446 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 SMARCC1Q92922 1105 aaPredicted RBP14.32□□□□□ -0.12
FAM49B-215ENST00000519824 STRBPQ96SI9 672 aaKnown RBP14.32□□□□□ -0.12
FAM49B-215ENST00000519824 KNDC1Q76NI1 1749 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 COL15A1P39059 1388 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 KIF28PB7ZC32 967 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 PFKFB1P16118 471 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 ZNF654Q8IZM8 581 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 PPP1R9BQ96SB3 815 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 KIF13AQ9H1H9 1805 aa14.32□□□□□ -0.12
FAM49B-215ENST00000519824 LDHBP07195 334 aaKnown RBP14.31□□□□□ -0.12
FAM49B-215ENST00000519824 DNA2P51530 1060 aa14.31□□□□□ -0.12
FAM49B-215ENST00000519824 TFAP4Q01664 338 aa14.31□□□□□ -0.12
FAM49B-215ENST00000519824 EVX2Q03828 476 aa14.31□□□□□ -0.12
FAM49B-215ENST00000519824 KCNG4Q8TDN1 519 aa14.31□□□□□ -0.12
FAM49B-215ENST00000519824 CCDC196A0A1B0GTZ2 297 aa14.31□□□□□ -0.12
FAM49B-215ENST00000519824 FAM205CA6NFA0 338 aa14.31□□□□□ -0.12
FAM49B-215ENST00000519824 RNF216Q9NWF9 866 aaPredicted RBP14.31□□□□□ -0.12
FAM49B-215ENST00000519824 NCAPD2Q15021 1401 aa14.31□□□□□ -0.12
FAM49B-215ENST00000519824 NCOA3Q9Y6Q9 1424 aa14.31□□□□□ -0.12
FAM49B-215ENST00000519824 CCDC194A0A1B0GVG4 234 aa14.31□□□□□ -0.12
FAM49B-215ENST00000519824 CIAO1O76071 339 aa14.31□□□□□ -0.12
FAM49B-215ENST00000519824 UBASH3AP57075 661 aa14.31□□□□□ -0.12
FAM49B-215ENST00000519824 SKIDA1Q1XH10 827 aa14.31□□□□□ -0.12
FAM49B-215ENST00000519824 PARP10Q53GL7 1025 aa14.3□□□□□ -0.12
FAM49B-215ENST00000519824 MROH5Q6ZUA9 1318 aa14.3□□□□□ -0.12
FAM49B-215ENST00000519824 IDEP14735 1019 aa14.3□□□□□ -0.12
FAM49B-215ENST00000519824 CRACR2BQ8N4Y2 399 aaPredicted RBP14.3□□□□□ -0.12
FAM49B-215ENST00000519824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.3□□□□□ -0.12
FAM49B-215ENST00000519824 FOXN1O15353 648 aa14.3□□□□□ -0.12
FAM49B-215ENST00000519824 GTF2IP78347 998 aa14.3□□□□□ -0.12
FAM49B-215ENST00000519824 PDE4BQ07343 736 aa14.3□□□□□ -0.12
FAM49B-215ENST00000519824 PTPN14Q15678 1187 aa14.3□□□□□ -0.12
FAM49B-215ENST00000519824 SOGA3Q5TF21 947 aa14.3□□□□□ -0.12
FAM49B-215ENST00000519824 OXER1Q8TDS5 423 aa14.3□□□□□ -0.12
FAM49B-215ENST00000519824 GPCPD1Q9NPB8 672 aa14.3□□□□□ -0.12
FAM49B-215ENST00000519824 OFD1O75665 1012 aa14.29□□□□□ -0.12
FAM49B-215ENST00000519824 PLEKHA8P1O95397 391 aa14.29□□□□□ -0.12
FAM49B-215ENST00000519824 TOP1P11387 765 aaKnown RBP14.29□□□□□ -0.12
FAM49B-215ENST00000519824 ANTXR2P58335 489 aa14.29□□□□□ -0.12
FAM49B-215ENST00000519824 UBA5Q9GZZ9 404 aa14.29□□□□□ -0.12
FAM49B-215ENST00000519824 SOS2Q07890 1332 aaPredicted RBP14.29□□□□□ -0.12
FAM49B-215ENST00000519824 ZNF274Q96GC6 653 aaPredicted RBP14.29□□□□□ -0.12
FAM49B-215ENST00000519824 KCNH3Q9ULD8 1083 aa14.29□□□□□ -0.12
FAM49B-215ENST00000519824 CCT6AP40227 531 aaKnown RBP14.29□□□□□ -0.12
FAM49B-215ENST00000519824 CACNB3P54284 484 aa14.29□□□□□ -0.12
FAM49B-215ENST00000519824 LONRF3Q496Y0 759 aa14.29□□□□□ -0.12
FAM49B-215ENST00000519824 WASF1Q92558 559 aa14.29□□□□□ -0.12
FAM49B-215ENST00000519824 SMARCE1Q969G3 411 aa14.29□□□□□ -0.12
FAM49B-215ENST00000519824 MED23Q9ULK4 1368 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 URI1O94763 535 aaPredicted RBP14.28□□□□□ -0.12
FAM49B-215ENST00000519824 MNS1Q8NEH6 495 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 SERTAD1Q9UHV2 236 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 UTYO14607 1347 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 USP17L3A6NCW0 530 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 USP17L4A6NCW7 530 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 TPM3P06753 285 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 ATP1A3P13637 1013 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 FDPSP14324 419 aaKnown RBP14.28□□□□□ -0.12
FAM49B-215ENST00000519824 ZNF75DP51815 510 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 USP17L1Q7RTZ2 530 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 NKX2-3Q8TAU0 364 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 CNNM2Q9H8M5 875 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 TRIM75PA6NK02 468 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 RAD51AP2Q09MP3 1159 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 UVSSAQ2YD98 709 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 TXNRD3Q86VQ6 643 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 TEX11Q8IYF3 940 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 FANCBQ8NB91 859 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 PKNOX2Q96KN3 472 aa14.28□□□□□ -0.12
FAM49B-215ENST00000519824 XPO4Q9C0E2 1151 aaKnown RBP14.28□□□□□ -0.12
FAM49B-215ENST00000519824 FAM196BA6NMK8 535 aa14.27□□□□□ -0.12
FAM49B-215ENST00000519824 AP5Z1O43299 807 aa14.27□□□□□ -0.12
FAM49B-215ENST00000519824 KARSQ15046 597 aaKnown RBP14.27□□□□□ -0.12
FAM49B-215ENST00000519824 LRP10Q7Z4F1 713 aa14.27□□□□□ -0.12
FAM49B-215ENST00000519824 LINC00116Q8NCU8 138 aa14.27□□□□□ -0.12
FAM49B-215ENST00000519824 CDK5RAP3Q96JB5 506 aa14.27□□□□□ -0.12
FAM49B-215ENST00000519824 MON2Q7Z3U7 1717 aa14.27□□□□□ -0.12
FAM49B-215ENST00000519824 ANKRD26Q9UPS8 1709 aa14.27□□□□□ -0.12
FAM49B-215ENST00000519824 USP42Q9H9J4 1324 aaKnown RBP14.27□□□□□ -0.12
FAM49B-215ENST00000519824 JAKMIP3Q5VZ66 844 aa14.27□□□□□ -0.13
FAM49B-215ENST00000519824 CLEC10AQ8IUN9 316 aa14.27□□□□□ -0.13
FAM49B-215ENST00000519824 LLPHQ9BRT6 129 aaKnown RBP14.27□□□□□ -0.13
FAM49B-215ENST00000519824 MINPP1Q9UNW1 487 aa14.27□□□□□ -0.13
FAM49B-215ENST00000519824 PCDHB6Q9Y5E3 794 aa14.27□□□□□ -0.13
FAM49B-215ENST00000519824 TPM2P07951 284 aa14.27□□□□□ -0.13
FAM49B-215ENST00000519824 NAP1L1P55209 391 aaKnown RBP14.27□□□□□ -0.13
FAM49B-215ENST00000519824 NAA30Q147X3 362 aaPredicted RBP14.27□□□□□ -0.13
FAM49B-215ENST00000519824 ZYXQ15942 572 aaKnown RBP14.27□□□□□ -0.13
FAM49B-215ENST00000519824 LETM2Q2VYF4 491 aa14.27□□□□□ -0.13
FAM49B-215ENST00000519824 GSG1L2A8MUP6 293 aa14.26□□□□□ -0.13
FAM49B-215ENST00000519824 EIF5P55010 431 aaKnown RBP14.26□□□□□ -0.13
FAM49B-215ENST00000519824 KIF23Q02241 960 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms