RNA–Protein interactions for RNA: ENST00000517992.1

SNTB1-202, Transcript of syntrophin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTB1, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-202ENST00000517992 ERCC4Q92889 916 aaPredicted RBP28.9■■■□□ 2.22
SNTB1-202ENST00000517992 B4E1Z4 1266 aa28.9■■■□□ 2.22
SNTB1-202ENST00000517992 SKILP12757 684 aa28.9■■■□□ 2.22
SNTB1-202ENST00000517992 TPM4P67936 248 aa28.9■■■□□ 2.22
SNTB1-202ENST00000517992 LY9Q9HBG7 655 aa28.9■■■□□ 2.22
SNTB1-202ENST00000517992 DENND2AQ9ULE3 1009 aa28.9■■■□□ 2.22
SNTB1-202ENST00000517992 UBN2Q6ZU65 1347 aa28.9■■■□□ 2.22
SNTB1-202ENST00000517992 SLC5A1P13866 664 aa28.89■■■□□ 2.22
SNTB1-202ENST00000517992 NTRK3Q16288 839 aa28.89■■■□□ 2.22
SNTB1-202ENST00000517992 DZIP3Q86Y13 1208 aaKnown RBP28.89■■■□□ 2.22
SNTB1-202ENST00000517992 HPSEQ9Y251 543 aa28.89■■■□□ 2.22
SNTB1-202ENST00000517992 MROH7-TTC4A0A0A0MT08 1334 aa28.89■■■□□ 2.22
SNTB1-202ENST00000517992 CHD4Q14839 1912 aa28.89■■■□□ 2.21
SNTB1-202ENST00000517992 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.89■■■□□ 2.21
SNTB1-202ENST00000517992 PATL2C9JE40 543 aaKnown RBP28.89■■■□□ 2.21
SNTB1-202ENST00000517992 WDHD1O75717 1129 aaPredicted RBP28.88■■■□□ 2.21
SNTB1-202ENST00000517992 U2AF2P26368 475 aaKnown RBP eCLIP28.88■■■□□ 2.211e-7■■□□□ 11.5
SNTB1-202ENST00000517992 CDC27P30260 824 aa28.88■■■□□ 2.21
SNTB1-202ENST00000517992 PTPAQ15257 358 aa28.88■■■□□ 2.21
SNTB1-202ENST00000517992 SPATA5Q8NB90 893 aa28.88■■■□□ 2.21
SNTB1-202ENST00000517992 CNNM2Q9H8M5 875 aa28.88■■■□□ 2.21
SNTB1-202ENST00000517992 MAP3K12Q12852 859 aa28.87■■■□□ 2.21
SNTB1-202ENST00000517992 NBPF11Q86T75 865 aa28.87■■■□□ 2.21
SNTB1-202ENST00000517992 NKX2-3Q8TAU0 364 aa28.87■■■□□ 2.21
SNTB1-202ENST00000517992 IKBKBO14920 756 aa28.87■■■□□ 2.21
SNTB1-202ENST00000517992 IARSP41252 1262 aaKnown RBP28.87■■■□□ 2.21
SNTB1-202ENST00000517992 ARID5BQ14865 1188 aa28.87■■■□□ 2.21
SNTB1-202ENST00000517992 NYAP1Q6ZVC0 841 aa28.87■■■□□ 2.21
SNTB1-202ENST00000517992 FILIP1Q7Z7B0 1213 aa28.87■■■□□ 2.21
SNTB1-202ENST00000517992 TUBE1Q9UJT0 475 aa28.87■■■□□ 2.21
SNTB1-202ENST00000517992 GOLGA8AA7E2F4 631 aa28.86■■■□□ 2.21
SNTB1-202ENST00000517992 TMEM67Q5HYA8 995 aa28.86■■■□□ 2.21
SNTB1-202ENST00000517992 AIFM3Q96NN9 605 aa28.86■■■□□ 2.21
SNTB1-202ENST00000517992 TRIM29Q14134 588 aa28.86■■■□□ 2.21
SNTB1-202ENST00000517992 MICU3Q86XE3 530 aa28.86■■■□□ 2.21
SNTB1-202ENST00000517992 IFNL3Q8IZI9 196 aa28.86■■■□□ 2.21
SNTB1-202ENST00000517992 CCDC150Q8NCX0 1101 aa28.86■■■□□ 2.21
SNTB1-202ENST00000517992 MAP3K14Q99558 947 aa28.86■■■□□ 2.21
SNTB1-202ENST00000517992 EPB41L4AQ9HCS5 686 aaPredicted RBP28.86■■■□□ 2.21
SNTB1-202ENST00000517992 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.86■■■□□ 2.21
SNTB1-202ENST00000517992 SYKP43405 635 aa28.85■■■□□ 2.21
SNTB1-202ENST00000517992 KCNQ4P56696 695 aa28.85■■■□□ 2.21
SNTB1-202ENST00000517992 CEP135Q66GS9 1140 aa28.85■■■□□ 2.21
SNTB1-202ENST00000517992 FAM217BQ9NTX9 383 aaPredicted RBP28.85■■■□□ 2.21
SNTB1-202ENST00000517992 LOC102724428A0A0B4J2F2 783 aa28.85■■■□□ 2.21
SNTB1-202ENST00000517992 SIK1P57059 783 aa28.85■■■□□ 2.21
SNTB1-202ENST00000517992 NFXL1Q6ZNB6 911 aa28.85■■■□□ 2.21
SNTB1-202ENST00000517992 CCDC112Q8NEF3 446 aa28.85■■■□□ 2.21
SNTB1-202ENST00000517992 MTA3Q9BTC8 594 aa28.85■■■□□ 2.21
SNTB1-202ENST00000517992 KRT23Q9C075 422 aa28.85■■■□□ 2.21
SNTB1-202ENST00000517992 NAPBQ9H115 298 aa28.85■■■□□ 2.21
SNTB1-202ENST00000517992 NCAPHQ15003 741 aa28.84■■■□□ 2.21
SNTB1-202ENST00000517992 WASF1Q92558 559 aa28.84■■■□□ 2.21
SNTB1-202ENST00000517992 SMARCC1Q92922 1105 aaPredicted RBP28.84■■■□□ 2.21
SNTB1-202ENST00000517992 SENP2Q9HC62 589 aa28.84■■■□□ 2.21
SNTB1-202ENST00000517992 FAM177BA6PVY3 158 aa28.83■■■□□ 2.21
SNTB1-202ENST00000517992 RANBP6O60518 1105 aaKnown RBP28.83■■■□□ 2.21
SNTB1-202ENST00000517992 GNAT2P19087 354 aa28.83■■■□□ 2.21
SNTB1-202ENST00000517992 GNL2Q13823 731 aaKnown RBP28.83■■■□□ 2.21
SNTB1-202ENST00000517992 RESP18Q5W5W9 173 aa28.83■■■□□ 2.21
SNTB1-202ENST00000517992 PDCL2Q8N4E4 241 aa28.83■■■□□ 2.21
SNTB1-202ENST00000517992 PNPLA7Q6ZV29 1317 aa28.83■■■□□ 2.21
SNTB1-202ENST00000517992 MBD4O95243 580 aa28.83■■■□□ 2.21
SNTB1-202ENST00000517992 KCNJ6P48051 423 aa28.83■■■□□ 2.21
SNTB1-202ENST00000517992 RASGRF1Q13972 1273 aa28.83■■■□□ 2.21
SNTB1-202ENST00000517992 PHKBQ93100 1093 aa28.83■■■□□ 2.21
SNTB1-202ENST00000517992 FBXW7Q969H0 707 aa28.83■■■□□ 2.21
SNTB1-202ENST00000517992 RTL9Q8NET4 1388 aa28.83■■■□□ 2.21
SNTB1-202ENST00000517992 KIF2AO00139 706 aaPredicted RBP28.82■■■□□ 2.2
SNTB1-202ENST00000517992 CUTAO60888 179 aa28.82■■■□□ 2.2
SNTB1-202ENST00000517992 FMNL1O95466 1100 aaPredicted RBP28.82■■■□□ 2.2
SNTB1-202ENST00000517992 MARCKSP29966 332 aaPredicted RBP28.82■■■□□ 2.2
SNTB1-202ENST00000517992 SHC4Q6S5L8 630 aa28.82■■■□□ 2.2
SNTB1-202ENST00000517992 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.82■■■□□ 2.2
SNTB1-202ENST00000517992 SLC12A7Q9Y666 1083 aa28.82■■■□□ 2.2
SNTB1-202ENST00000517992 ATP6V1AP38606 617 aa28.82■■■□□ 2.2
SNTB1-202ENST00000517992 AKNAD1Q5T1N1 836 aa28.82■■■□□ 2.2
SNTB1-202ENST00000517992 CCAR2Q8N163 923 aaKnown RBP28.82■■■□□ 2.2
SNTB1-202ENST00000517992 MAGEB6Q8N7X4 407 aa28.82■■■□□ 2.2
SNTB1-202ENST00000517992 XPO4Q9C0E2 1151 aaKnown RBP28.82■■■□□ 2.2
SNTB1-202ENST00000517992 BCORQ6W2J9 1755 aa28.82■■■□□ 2.2
SNTB1-202ENST00000517992 IFNAR1P17181 557 aa28.81■■■□□ 2.2
SNTB1-202ENST00000517992 RXRAP19793 462 aa28.81■■■□□ 2.2
SNTB1-202ENST00000517992 SSRP1Q08945 709 aaKnown RBP28.81■■■□□ 2.2
SNTB1-202ENST00000517992 PTPN14Q15678 1187 aa28.81■■■□□ 2.2
SNTB1-202ENST00000517992 ELOA2Q8IYF1 753 aaPredicted RBP28.81■■■□□ 2.2
SNTB1-202ENST00000517992 LAMB2P55268 1798 aa28.81■■■□□ 2.2
SNTB1-202ENST00000517992 RREB1Q92766 1687 aa28.81■■■□□ 2.2
SNTB1-202ENST00000517992 NCBP1Q09161 790 aaKnown RBP28.81■■■□□ 2.2
SNTB1-202ENST00000517992 ITPK1Q13572 414 aa28.81■■■□□ 2.2
SNTB1-202ENST00000517992 IFNKQ9P0W0 207 aa28.81■■■□□ 2.2
SNTB1-202ENST00000517992 LY75O60449 1722 aa28.8■■■□□ 2.2
SNTB1-202ENST00000517992 IFIT3O14879 490 aaKnown RBP28.8■■■□□ 2.2
SNTB1-202ENST00000517992 MYO1BO43795 1136 aa28.8■■■□□ 2.2
SNTB1-202ENST00000517992 RCAN1P53805 252 aa28.8■■■□□ 2.2
SNTB1-202ENST00000517992 EIF5P55010 431 aaKnown RBP28.8■■■□□ 2.2
SNTB1-202ENST00000517992 STAG1Q8WVM7 1258 aa28.8■■■□□ 2.2
SNTB1-202ENST00000517992 ZSWIM5Q9P217 1185 aa28.8■■■□□ 2.2
SNTB1-202ENST00000517992 USP27XA6NNY8 438 aa28.8■■■□□ 2.2
SNTB1-202ENST00000517992 GSG1L2A8MUP6 293 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms