RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 TBC1D22AQ8WUA7 517 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 STRBPQ96SI9 672 aaKnown RBP11.76□□□□□ -0.53
TPM3-221ENST00000513769 SEC62Q99442 399 aaKnown RBP11.76□□□□□ -0.53
TPM3-221ENST00000513769 EYA3Q99504 573 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 ZC3H12CQ9C0D7 883 aaKnown RBP11.76□□□□□ -0.53
TPM3-221ENST00000513769 COA1Q9GZY4 146 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 PUS7LQ9H0K6 701 aaKnown RBP11.76□□□□□ -0.53
TPM3-221ENST00000513769 ZNF532Q9HCE3 1301 aa11.76□□□□□ -0.53
TPM3-221ENST00000513769 ARAP2Q8WZ64 1704 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 ZNF213O14771 459 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 GPAA1O43292 621 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 FGAP02671 866 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 TGFB2P61812 414 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 GSTO1P78417 241 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 IMMTQ16891 758 aaKnown RBP11.75□□□□□ -0.53
TPM3-221ENST00000513769 C2CD5Q86YS7 1000 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 SLF2Q8IX21 1173 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 AIDAQ96BJ3 306 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 NEK1Q96PY6 1258 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 MRIQ9BWK5 157 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 NACAP1Q9BZK3 213 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 SEPT9Q9UHD8 586 aaPredicted RBP11.75□□□□□ -0.53
TPM3-221ENST00000513769 PALD1Q9ULE6 856 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 LIMCH1Q9UPQ0 1083 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 ZMYM6O95789 1325 aa11.75□□□□□ -0.53
TPM3-221ENST00000513769 HSP90AA1P07900 732 aaKnown RBP11.74□□□□□ -0.53
TPM3-221ENST00000513769 SLC4A3P48751 1232 aa11.74□□□□□ -0.53
TPM3-221ENST00000513769 CUL4AQ13619 759 aa11.74□□□□□ -0.53
TPM3-221ENST00000513769 BLOC1S2Q6QNY1 142 aa11.74□□□□□ -0.53
TPM3-221ENST00000513769 PI16Q6UXB8 463 aa11.74□□□□□ -0.53
TPM3-221ENST00000513769 PODNQ7Z5L7 613 aa11.74□□□□□ -0.53
TPM3-221ENST00000513769 MAGEB6Q8N7X4 407 aa11.74□□□□□ -0.53
TPM3-221ENST00000513769 SUPT20HQ8NEM7 779 aa11.74□□□□□ -0.53
TPM3-221ENST00000513769 TTC14Q96N46 770 aa11.74□□□□□ -0.53
TPM3-221ENST00000513769 RTFDC1Q9BY42 306 aaPredicted RBP11.74□□□□□ -0.53
TPM3-221ENST00000513769 SH2B1Q9NRF2 756 aaPredicted RBP11.74□□□□□ -0.53
TPM3-221ENST00000513769 PDRG1Q9NUG6 133 aa11.74□□□□□ -0.53
TPM3-221ENST00000513769 CHMP5Q9NZZ3 219 aa11.74□□□□□ -0.53
TPM3-221ENST00000513769 MAST3O60307 1309 aa11.74□□□□□ -0.53
TPM3-221ENST00000513769 C6orf229H3BNL8 230 aa11.73□□□□□ -0.53
TPM3-221ENST00000513769 M0R2C6 588 aa11.73□□□□□ -0.53
TPM3-221ENST00000513769 CYP21A2P08686 494 aa11.73□□□□□ -0.53
TPM3-221ENST00000513769 PCP11498 1178 aaKnown RBP11.73□□□□□ -0.53
TPM3-221ENST00000513769 CASTP20810 708 aaKnown RBP11.73□□□□□ -0.53
TPM3-221ENST00000513769 IFFO2Q5TF58 517 aa11.73□□□□□ -0.53
TPM3-221ENST00000513769 FAM205AQ6ZU69 1335 aa11.73□□□□□ -0.53
TPM3-221ENST00000513769 DHX32Q7L7V1 743 aaKnown RBP11.73□□□□□ -0.53
TPM3-221ENST00000513769 ZNF622Q969S3 477 aaKnown RBP eCLIP11.73□□□□□ -0.532e-16■□□□□ 10.8
TPM3-221ENST00000513769 MTA3Q9BTC8 594 aa11.73□□□□□ -0.53
TPM3-221ENST00000513769 RAI14Q9P0K7 980 aa11.73□□□□□ -0.53
TPM3-221ENST00000513769 ABCF2Q9UG63 623 aa11.73□□□□□ -0.53
TPM3-221ENST00000513769 POLLQ9UGP5 575 aa11.73□□□□□ -0.53
TPM3-221ENST00000513769 WDR19Q8NEZ3 1342 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 WTIPA6NIX2 430 aaPredicted RBP11.72□□□□□ -0.53
TPM3-221ENST00000513769 UFL1O94874 794 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 BAG3O95817 575 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 CYP7A1P22680 504 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 PPP4CP60510 307 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 FKBP1AP62942 108 aaKnown RBP11.72□□□□□ -0.53
TPM3-221ENST00000513769 SOGA3Q5TF21 947 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 NAA16Q6N069 864 aaPredicted RBP11.72□□□□□ -0.53
TPM3-221ENST00000513769 DPP8Q6V1X1 898 aaPredicted RBP11.72□□□□□ -0.53
TPM3-221ENST00000513769 TXNRD3Q86VQ6 643 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 RTKN2Q8IZC4 609 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 IFNL3Q8IZI9 196 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 C7orf43Q8WVR3 580 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 NSUN4Q96CB9 384 aaKnown RBP11.72□□□□□ -0.53
TPM3-221ENST00000513769 ZFRQ96KR1 1074 aaKnown RBP11.72□□□□□ -0.53
TPM3-221ENST00000513769 JAKMIP1Q96N16 626 aaKnown RBP11.72□□□□□ -0.53
TPM3-221ENST00000513769 ATP8A2Q9NTI2 1148 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 WWC3Q9ULE0 1092 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 TAF1P21675 1872 aa11.72□□□□□ -0.53
TPM3-221ENST00000513769 MAGEB6P1A0A0J9YX57 407 aa11.71□□□□□ -0.53
TPM3-221ENST00000513769 LDHBP07195 334 aaKnown RBP11.71□□□□□ -0.53
TPM3-221ENST00000513769 YBX3P16989 372 aaKnown RBP eCLIP11.71□□□□□ -0.53
TPM3-221ENST00000513769 RPS6KB1P23443 525 aa11.71□□□□□ -0.53
TPM3-221ENST00000513769 DDIT3P35638 169 aa11.71□□□□□ -0.53
TPM3-221ENST00000513769 NUCB2P80303 420 aa11.71□□□□□ -0.53
TPM3-221ENST00000513769 EXOSC10Q01780 885 aaKnown RBP11.71□□□□□ -0.53
TPM3-221ENST00000513769 TRDNQ13061 729 aa11.71□□□□□ -0.53
TPM3-221ENST00000513769 ADCK5Q3MIX3 580 aa11.71□□□□□ -0.53
TPM3-221ENST00000513769 CCDC129Q6ZRS4 1044 aa11.71□□□□□ -0.53
TPM3-221ENST00000513769 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
TPM3-221ENST00000513769 TMX3Q96JJ7 454 aa11.71□□□□□ -0.53
TPM3-221ENST00000513769 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.71□□□□□ -0.53
TPM3-221ENST00000513769 GSG1L2A8MUP6 293 aa11.7□□□□□ -0.54
TPM3-221ENST00000513769 E7EWF7 191 aa11.7□□□□□ -0.54
TPM3-221ENST00000513769 CD2BP2O95400 341 aaKnown RBP11.7□□□□□ -0.54
TPM3-221ENST00000513769 APPP05067 770 aa11.7□□□□□ -0.54
TPM3-221ENST00000513769 EVCP57679 992 aa11.7□□□□□ -0.54
TPM3-221ENST00000513769 MECOMQ03112 1051 aa11.7□□□□□ -0.54
TPM3-221ENST00000513769 MSL1Q68DK7 614 aa11.7□□□□□ -0.54
TPM3-221ENST00000513769 TMTC2Q8N394 836 aa11.7□□□□□ -0.54
TPM3-221ENST00000513769 NCOA7Q8NI08 942 aa11.7□□□□□ -0.54
TPM3-221ENST00000513769 AGXT2Q9BYV1 514 aa11.7□□□□□ -0.54
TPM3-221ENST00000513769 CNNM2Q9H8M5 875 aa11.7□□□□□ -0.54
TPM3-221ENST00000513769 TSKSQ9UJT2 592 aa11.7□□□□□ -0.54
TPM3-221ENST00000513769 ANAPC4Q9UJX5 808 aa11.7□□□□□ -0.54
TPM3-221ENST00000513769 SOWAHBA6NEL2 793 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms