RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 IGF2BP3O00425 579 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 ZSCAN22P10073 491 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 LIG1P18858 919 aa3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 MTMR3Q13615 1198 aa3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 TTLL4Q14679 1199 aa3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 KIF4BQ2VIQ3 1234 aa3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 MPZL3Q6UWV2 235 aa3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 SYDE1Q6ZW31 735 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 EHD4Q9H223 541 aa3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 CCDC86Q9H6F5 360 aaKnown RBP3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 SSU72Q9NP77 194 aaKnown RBP3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 DISC1Q9NRI5 854 aa3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 PLAGL2Q9UPG8 496 aa3.89□□□□□ -1.79
HMGB3P3-201ENST00000510526 NFIBO00712 420 aa3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 LEFTY1O75610 366 aa3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 GLI1P08151 1106 aa3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 HCLS1P14317 486 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 ITIH2P19823 946 aa3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 SSFA2P28290 1259 aa3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 ZP2Q05996 745 aa3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 IKZF1Q13422 519 aa3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 C1QL4Q86Z23 238 aa3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 CCDC97Q96F63 343 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 CCDC87Q9NVE4 849 aa3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 LMCD1Q9NZU5 365 aa3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 CTNND2Q9UQB3 1225 aa3.88□□□□□ -1.79
HMGB3P3-201ENST00000510526 CPNE3O75131 537 aaKnown RBP3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 GSTP1P09211 210 aaKnown RBP3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 CLCN7P51798 805 aa3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 PPP2R3AQ06190 1150 aa3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 TMEM67Q5HYA8 995 aa3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 LCNL1Q6ZST4 164 aa3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 TOP6BLQ8N6T0 577 aa3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 FBXO15Q8NCQ5 510 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 WDR89Q96FK6 387 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 LIN37Q96GY3 246 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 CCDC120Q96HB5 630 aa3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 SERPINA10Q9UK55 444 aa3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 TRAK1Q9UPV9 953 aa3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 PCDHGC5Q9Y5F6 944 aa3.87□□□□□ -1.79
HMGB3P3-201ENST00000510526 ZNF862O60290 1169 aa3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 PDE3BQ13370 1112 aa3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 PRPF40BQ6NWY9 871 aaKnown RBP3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 TTLL10Q6ZVT0 673 aa3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 CYFIP1Q7L576 1253 aa3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 AMIGO3Q86WK7 504 aa3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 RNF214Q8ND24 703 aa3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 KIRREL1Q96J84 757 aa3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 ZC3H12CQ9C0D7 883 aaKnown RBP3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 ABCB6Q9NP58 842 aa3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 PRDM7Q9NQW5 492 aa3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 BRPF3Q9ULD4 1205 aa3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 U3KQE9 123 aa3.86□□□□□ -1.79
HMGB3P3-201ENST00000510526 TMEM238LA0A1B0GVL6 79 aa3.85□□□□□ -1.79
HMGB3P3-201ENST00000510526 GNAT3A8MTJ3 354 aa3.85□□□□□ -1.79
HMGB3P3-201ENST00000510526 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P3-201ENST00000510526 EIF5BO60841 1220 aaKnown RBP3.85□□□□□ -1.79
HMGB3P3-201ENST00000510526 ABL1P00519 1130 aa3.85□□□□□ -1.79
HMGB3P3-201ENST00000510526 TMEM253P0C7T8 217 aa3.85□□□□□ -1.79
HMGB3P3-201ENST00000510526 ERVK-24P63145 666 aa3.85□□□□□ -1.79
HMGB3P3-201ENST00000510526 PRR23BQ6ZRT6 265 aa3.85□□□□□ -1.79
HMGB3P3-201ENST00000510526 SPACA3Q8IXA5 215 aa3.85□□□□□ -1.79
HMGB3P3-201ENST00000510526 ISL2Q96A47 359 aa3.85□□□□□ -1.79
HMGB3P3-201ENST00000510526 HEXIM2Q96MH2 286 aaKnown RBP3.85□□□□□ -1.79
HMGB3P3-201ENST00000510526 PPP4R2Q9NY27 417 aa3.85□□□□□ -1.79
HMGB3P3-201ENST00000510526 GADD45BO75293 160 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 C1QTNF9P0C862 333 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 GDNFP39905 211 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 ECM1Q16610 540 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 USPL1Q5W0Q7 1092 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 CIAPIN1Q6FI81 312 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 KCNB2Q92953 911 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 CITED4Q96RK1 184 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 EMILIN2Q9BXX0 1053 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 DNAJC25Q9H1X3 360 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 NPHS2Q9NP85 383 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 PRDM10Q9NQV6 1147 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 TMEM39AQ9NV64 488 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 PITPNM2Q9BZ72 1349 aa3.84□□□□□ -1.79
HMGB3P3-201ENST00000510526 NDUFB5O43674 189 aa3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 NEFMP07197 916 aa3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 XRCC5P13010 732 aaKnown RBP3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 ZNF157P51786 506 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 NKPD1Q17RQ9 610 aa3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 ZC3H12AQ5D1E8 599 aaKnown RBP3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 FYB2Q5VWT5 728 aa3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 DTHD1Q6ZMT9 781 aa3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 FAM214BQ7L5A3 538 aa3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 PDZD3Q86UT5 571 aa3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 NPAS4Q8IUM7 802 aa3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 KCT2Q8NC54 265 aa3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 FOXQ1Q9C009 403 aa3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 EGFL7Q9UHF1 273 aa3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 GPN3Q9UHW5 284 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 MAPK8IP1Q9UQF2 711 aa3.83□□□□□ -1.8
HMGB3P3-201ENST00000510526 TCAF2A6NFQ2 919 aa3.82□□□□□ -1.8
HMGB3P3-201ENST00000510526 TMEM88BA6NKF7 163 aa3.82□□□□□ -1.8
HMGB3P3-201ENST00000510526 PPP1R15AO75807 674 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms