RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 NR1H3Q13133 447 aa4.52□□□□□ -1.69
NEDD4-209ENST00000508871 CCDC85BQ15834 202 aaPredicted RBP4.52□□□□□ -1.69
NEDD4-209ENST00000508871 MAP9Q49MG5 647 aa4.52□□□□□ -1.69
NEDD4-209ENST00000508871 KIAA0825Q8IV33 1275 aa4.52□□□□□ -1.69
NEDD4-209ENST00000508871 SLF2Q8IX21 1173 aa4.52□□□□□ -1.69
NEDD4-209ENST00000508871 NDUFAF2Q8N183 169 aa4.52□□□□□ -1.69
NEDD4-209ENST00000508871 PRAM1Q96QH2 718 aa4.52□□□□□ -1.69
NEDD4-209ENST00000508871 CDHR5Q9HBB8 845 aa4.52□□□□□ -1.69
NEDD4-209ENST00000508871 EMILIN3Q9NT22 766 aa4.52□□□□□ -1.69
NEDD4-209ENST00000508871 SNX5Q9Y5X3 404 aa4.52□□□□□ -1.69
NEDD4-209ENST00000508871 MORC2Q9Y6X9 1032 aaPredicted RBP4.52□□□□□ -1.69
NEDD4-209ENST00000508871 RTL1A6NKG5 1358 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 ZBTB24O43167 697 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 MYBL2P10244 700 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 HSPA4P34932 840 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 EGFLAMQ63HQ2 1017 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 LRRC43Q8N309 656 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 RUFY2Q8WXA3 655 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 SKA1Q96BD8 255 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 CDK19Q9BWU1 502 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 EFCC1Q9HA90 598 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 P4HBP07237 508 aaKnown RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 NEK3P51956 506 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 CCDC30Q5VVM6 783 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 NBPF11Q86T75 865 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 WDR63Q8IWG1 891 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 ZNF454Q8N9F8 522 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 SCG3Q8WXD2 468 aaKnown RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 EHMT1Q9H9B1 1298 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 CBX8Q9HC52 389 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 LUC7LQ9NQ29 371 aaKnown RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 USP6P35125 1406 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 ROBO2Q9HCK4 1378 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 SYNDIG1LA6NDD5 238 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 CBFA2T2O43439 604 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 PSMC1P62191 440 aaKnown RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 HNRNPUQ00839 825 aaKnown RBP eCLIP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 CCSAPQ6IQ19 270 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 METTL3Q86U44 580 aaKnown RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 PPP1R14CQ8TAE6 165 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 HNRNPLLQ8WVV9 542 aaKnown RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 FAM86C1Q9NVL1 165 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 MKS1Q9NXB0 559 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 RASAL2Q9UJF2 1139 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 PNMA3Q9UL41 463 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 SCINQ9Y6U3 715 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 TCEA3O75764 348 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 FAPQ12884 760 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 TTF1Q15361 905 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 SPOUT1Q5T280 376 aaKnown RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 CEP135Q66GS9 1140 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 RSBN1LQ6PCB5 846 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 SLFN12Q8IYM2 578 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 RBM42Q9BTD8 480 aaKnown RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 IER2Q9BTL4 223 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 ADAM33Q9BZ11 813 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 ANGPTL3Q9Y5C1 460 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 NHSL1Q5SYE7 1610 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 AP3D1O14617 1153 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 DESP17661 470 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 GJA8P48165 433 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 PTGDRQ13258 359 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 COBLL1Q53SF7 1204 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 C3orf67Q6ZVT6 689 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 C16orf86Q6ZW13 317 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 TAB3Q8N5C8 712 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 HELQQ8TDG4 1101 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 SIRPGQ9P1W8 387 aa4.51□□□□□ -1.69
NEDD4-209ENST00000508871 FEZ2Q9UHY8 353 aaPredicted RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 MRPS23Q9Y3D9 190 aaKnown RBP4.51□□□□□ -1.69
NEDD4-209ENST00000508871 PARP4Q9UKK3 1724 aaKnown RBP4.5□□□□□ -1.69
NEDD4-209ENST00000508871 CCP110O43303 1012 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 KATNA1O75449 491 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 MBD4O95243 580 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 FOSL1P15407 271 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 AKAP17AQ02040 695 aaKnown RBP4.5□□□□□ -1.69
NEDD4-209ENST00000508871 ZBTB16Q05516 673 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 PTPN21Q16825 1174 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 C4orf46Q504U0 113 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 VMP1Q96GC9 406 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 SCHIP1Q9P0W5 487 aaPredicted RBP4.5□□□□□ -1.69
NEDD4-209ENST00000508871 WNK3Q9BYP7 1800 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 PLEKHH1Q9ULM0 1364 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.5□□□□□ -1.69
NEDD4-209ENST00000508871 ESYT3A0FGR9 886 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 OPA1O60313 960 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 PTCD1O75127 700 aaKnown RBP4.5□□□□□ -1.69
NEDD4-209ENST00000508871 TBC1D8O95759 1140 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 SCGB1D2O95969 90 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 GPS2Q13227 327 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 CCDC158Q5M9N0 1113 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 PLPP7Q8NBV4 271 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 JARID2Q92833 1246 aaPredicted RBP4.5□□□□□ -1.69
NEDD4-209ENST00000508871 DNAJC7Q99615 494 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 ARHGEF10LQ9HCE6 1279 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 DMTF1Q9Y222 760 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 ADAMTS7Q9UKP4 1686 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 NOS2P35228 1153 aa4.5□□□□□ -1.69
NEDD4-209ENST00000508871 MLECQ14165 292 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms