RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 THEGQ9P2T0 379 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 ABCF2Q9UG63 623 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 BCAP29Q9UHQ4 241 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 MTMR6Q9Y217 621 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 MAGI1Q96QZ7 1491 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 CTNNA1P35221 906 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 MAGEA1P43355 309 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 ZNF131P52739 623 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 MAP3K21Q5TCX8 1036 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 CCDC170Q8IYT3 715 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 SLF1Q9BQI6 1058 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 EHMT1Q9H9B1 1298 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 SERPINA10Q9UK55 444 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 RNF113AO15541 343 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 POSTNQ15063 836 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 MAP7D1Q3KQU3 841 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 CAVIN4Q5BKX8 364 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 BICDL1Q6ZP65 573 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 CACTINQ8WUQ7 758 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 IQGAP2Q13576 1575 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 NESP48681 1621 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 EIF3CLB5ME19 914 aaKnown RBP8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 EVI5O60447 810 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 PLCD1P51178 756 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 SLC9C1Q4G0N8 1177 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 DENND2CQ68D51 928 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 NME9Q86XW9 330 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 RASEFQ8IZ41 740 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 CCDC197Q8NCU1 140 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 EIF3CQ99613 913 aaKnown RBP8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 TRIM6Q9C030 488 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 MSH6P52701 1360 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 FAM83GA6ND36 823 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 PFDN1O60925 122 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 NBPF9Q3BBW0 867 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 RASIP1Q5U651 963 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 SAAL1Q96ER3 474 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 DDX21Q9NR30 783 aaKnown RBP eCLIP8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 ADGRF5Q8IZF2 1346 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 RGS16O15492 202 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 FLOT1O75955 427 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 EPHB4P54760 987 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 TRPC3Q13507 836 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 CUL5Q93034 780 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 PARD6BQ9BYG5 372 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 Q9H521 79 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 PAG1Q9NWQ8 432 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 ATP6V0A2Q9Y487 856 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 CC2D2AQ9P2K1 1620 aa8.16□□□□□ -1.1
UBE2D3-224ENST00000508474 IKBKBO14920 756 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 NR1I2O75469 434 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 CLTAP09496 248 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 CUL4AQ13619 759 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 TRIM68Q6AZZ1 485 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 FAM173BQ6P4H8 233 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 CLEC17AQ6ZS10 378 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 UBL4BQ8N7F7 174 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 TMEM87AQ8NBN3 555 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 OR8K1Q8NGG5 319 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 BICC1Q9H694 974 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 ADAM21Q9UKJ8 722 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 STK38LQ9Y2H1 464 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 IFT140Q96RY7 1462 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 ABCA10Q8WWZ4 1543 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 IFT88Q13099 833 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 RPS6KA1Q15418 735 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 ALS2CLQ60I27 953 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 CCDC84Q86UT8 332 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 SYCP3Q8IZU3 236 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 CPA1P15085 419 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 IL15P40933 162 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 ATP1A2P50993 1020 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 ADKP55263 362 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 ARID5AQ03989 594 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 PKP1Q13835 747 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 CNNM4Q6P4Q7 775 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 DTHD1Q6ZMT9 781 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 GBP7Q8N8V2 638 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 FERMT2Q96AC1 680 aa8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 TPX2Q9ULW0 747 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-224ENST00000508474 CFAP43Q8NDM7 1665 aa8.15□□□□□ -1.11
UBE2D3-224ENST00000508474 KDM5DQ9BY66 1539 aa8.15□□□□□ -1.11
UBE2D3-224ENST00000508474 A0A1W2PQ27 194 aa8.15□□□□□ -1.11
UBE2D3-224ENST00000508474 A0A1W2PQ64 194 aa8.15□□□□□ -1.11
UBE2D3-224ENST00000508474 A0A1W2PQD8 194 aa8.15□□□□□ -1.11
UBE2D3-224ENST00000508474 GRM8O00222 908 aa8.15□□□□□ -1.11
UBE2D3-224ENST00000508474 GNAT2P19087 354 aa8.15□□□□□ -1.11
UBE2D3-224ENST00000508474 IFIT1BQ5T764 474 aaKnown RBP8.15□□□□□ -1.11
UBE2D3-224ENST00000508474 HHATQ5VTY9 493 aa8.15□□□□□ -1.11
UBE2D3-224ENST00000508474 CNKSR2Q8WXI2 1034 aa8.15□□□□□ -1.11
UBE2D3-224ENST00000508474 NRBP1Q9UHY1 535 aa8.15□□□□□ -1.11
UBE2D3-224ENST00000508474 KIAA0586Q9BVV6 1533 aa8.15□□□□□ -1.11
UBE2D3-224ENST00000508474 TROVE2P10155 538 aaKnown RBP eCLIP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 IRX1P78414 480 aaPredicted RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 OTUD7AQ8TE49 926 aaPredicted RBP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 TMEM87BQ96K49 555 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 YY1AP1Q9H869 796 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 DNMBPQ6XZF7 1577 aa8.14□□□□□ -1.11
UBE2D3-224ENST00000508474 SUN1O94901 812 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms