RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 FOCADQ5VW36 1801 aa20.74■□□□□ 0.91
RNF4-209ENST00000507784 CYP2D7A0A087X1C5 515 aa20.73■□□□□ 0.91
RNF4-209ENST00000507784 SPDYE2BA6NHP3 402 aa20.73■□□□□ 0.91
RNF4-209ENST00000507784 H7C1D1 291 aa20.73■□□□□ 0.91
RNF4-209ENST00000507784 DDNO94850 711 aaPredicted RBP20.73■□□□□ 0.91
RNF4-209ENST00000507784 SPDYE6P0CI01 402 aa20.73■□□□□ 0.91
RNF4-209ENST00000507784 CYP2D6P10635 497 aa20.73■□□□□ 0.91
RNF4-209ENST00000507784 MMP14P50281 582 aa20.73■□□□□ 0.91
RNF4-209ENST00000507784 CACNB3P54284 484 aa20.73■□□□□ 0.91
RNF4-209ENST00000507784 NEK1Q96PY6 1258 aa20.73■□□□□ 0.91
RNF4-209ENST00000507784 TMOD2Q9NZR1 351 aa20.73■□□□□ 0.91
RNF4-209ENST00000507784 ARPP21Q9UBL0 812 aaPredicted RBP20.73■□□□□ 0.91
RNF4-209ENST00000507784 NEK4P51957 841 aa20.72■□□□□ 0.91
RNF4-209ENST00000507784 ZNF280AP59817 542 aaPredicted RBP20.72■□□□□ 0.91
RNF4-209ENST00000507784 DPY19L2Q6NUT2 758 aa20.72■□□□□ 0.91
RNF4-209ENST00000507784 STOX1Q6ZVD7 989 aa20.72■□□□□ 0.91
RNF4-209ENST00000507784 UPF3BQ9BZI7 483 aaKnown RBP20.72■□□□□ 0.91
RNF4-209ENST00000507784 FLT1P17948 1338 aa20.72■□□□□ 0.91
RNF4-209ENST00000507784 CLRN2A0PK11 232 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 MYO1BO43795 1136 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 WDHD1O75717 1129 aaPredicted RBP20.71■□□□□ 0.91
RNF4-209ENST00000507784 CPA1P15085 419 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 TRDNQ13061 729 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 TBC1D10BQ4KMP7 808 aaPredicted RBP20.71■□□□□ 0.91
RNF4-209ENST00000507784 SBK1Q52WX2 424 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 BLOC1S2Q6QNY1 142 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 SAMD7Q7Z3H4 446 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 TBC1D10CQ8IV04 446 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 MTMR14Q8NCE2 650 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 IL17RAQ96F46 866 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 TM6SF1Q9BZW5 370 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 DDX4Q9NQI0 724 aaKnown RBP20.71■□□□□ 0.91
RNF4-209ENST00000507784 TOMM22Q9NS69 142 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 ZNF70Q9UC06 446 aaPredicted RBP20.71■□□□□ 0.91
RNF4-209ENST00000507784 CYP46A1Q9Y6A2 500 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 LAMB1P07942 1786 aa20.71■□□□□ 0.91
RNF4-209ENST00000507784 ST18O60284 1047 aa20.7■□□□□ 0.9
RNF4-209ENST00000507784 SLC3A2P08195 630 aaKnown RBP20.7■□□□□ 0.9
RNF4-209ENST00000507784 LMOD1P29536 600 aaPredicted RBP20.7■□□□□ 0.9
RNF4-209ENST00000507784 TCP10Q12799 353 aa20.7■□□□□ 0.9
RNF4-209ENST00000507784 RRP12Q5JTH9 1297 aaKnown RBP20.7■□□□□ 0.9
RNF4-209ENST00000507784 MFSD6Q6ZSS7 791 aa20.7■□□□□ 0.9
RNF4-209ENST00000507784 RALYLQ86SE5 291 aaKnown RBP20.7■□□□□ 0.9
RNF4-209ENST00000507784 NBPF3Q9H094 633 aa20.7■□□□□ 0.9
RNF4-209ENST00000507784 VEZTQ9HBM0 779 aa20.7■□□□□ 0.9
RNF4-209ENST00000507784 INCENPQ9NQS7 918 aa20.7■□□□□ 0.9
RNF4-209ENST00000507784 MKRN1Q9UHC7 482 aaKnown RBP20.7■□□□□ 0.9
RNF4-209ENST00000507784 TCP10L2B9ZVM9 353 aa20.69■□□□□ 0.9
RNF4-209ENST00000507784 NFIAQ12857 509 aa20.69■□□□□ 0.9
RNF4-209ENST00000507784 AKNAD1Q5T1N1 836 aa20.69■□□□□ 0.9
RNF4-209ENST00000507784 RUFY3Q7L099 469 aa20.69■□□□□ 0.9
RNF4-209ENST00000507784 NCOA7Q8NI08 942 aa20.69■□□□□ 0.9
RNF4-209ENST00000507784 RNF41Q9H4P4 317 aaPredicted RBP20.69■□□□□ 0.9
RNF4-209ENST00000507784 ZSWIM6Q9HCJ5 1215 aa20.69■□□□□ 0.9
RNF4-209ENST00000507784 PDRG1Q9NUG6 133 aa20.69■□□□□ 0.9
RNF4-209ENST00000507784 GPRC5DQ9NZD1 345 aa20.69■□□□□ 0.9
RNF4-209ENST00000507784 ANAPC4Q9UJX5 808 aa20.69■□□□□ 0.9
RNF4-209ENST00000507784 SMIM22K7EJ46 135 aa20.68■□□□□ 0.9
RNF4-209ENST00000507784 WNT10BO00744 389 aa20.68■□□□□ 0.9
RNF4-209ENST00000507784 KIF4BQ2VIQ3 1234 aa20.68■□□□□ 0.9
RNF4-209ENST00000507784 NBPF9Q3BBW0 867 aa20.68■□□□□ 0.9
RNF4-209ENST00000507784 C12orf60Q5U649 245 aa20.68■□□□□ 0.9
RNF4-209ENST00000507784 ZSCAN29Q8IWY8 852 aaPredicted RBP20.68■□□□□ 0.9
RNF4-209ENST00000507784 IDI2Q9BXS1 227 aa20.68■□□□□ 0.9
RNF4-209ENST00000507784 OSBPL5Q9H0X9 879 aaPredicted RBP20.68■□□□□ 0.9
RNF4-209ENST00000507784 HMGB1P09429 215 aaKnown RBP20.67■□□□□ 0.9
RNF4-209ENST00000507784 RPS6KB1P23443 525 aa20.67■□□□□ 0.9
RNF4-209ENST00000507784 EPS15P42566 896 aa20.67■□□□□ 0.9
RNF4-209ENST00000507784 EVX2Q03828 476 aa20.67■□□□□ 0.9
RNF4-209ENST00000507784 BECN1Q14457 450 aa20.67■□□□□ 0.9
RNF4-209ENST00000507784 SPDYE2Q495Y8 402 aa20.67■□□□□ 0.9
RNF4-209ENST00000507784 TTC6Q86TZ1 520 aa20.67■□□□□ 0.9
RNF4-209ENST00000507784 STAG1Q8WVM7 1258 aa20.67■□□□□ 0.9
RNF4-209ENST00000507784 ZBED3Q96IU2 234 aaPredicted RBP20.67■□□□□ 0.9
RNF4-209ENST00000507784 FAM198AQ9UFP1 575 aa20.67■□□□□ 0.9
RNF4-209ENST00000507784 B4E1Z4 1266 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 EGFRP00533 1210 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 HLA-DOAP06340 250 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 PLCD1P51178 756 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 PDE4BQ07343 736 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 NOL8Q76FK4 1167 aaKnown RBP20.66■□□□□ 0.9
RNF4-209ENST00000507784 HSCBQ8IWL3 235 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 ZFPM1Q8IX07 1006 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 DYNLL2Q96FJ2 89 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 TCEANC2Q96MN5 208 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 KRT23Q9C075 422 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 CNNM2Q9H8M5 875 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 TACC3Q9Y6A5 838 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 NEDD4P46934 1319 aa20.66■□□□□ 0.9
RNF4-209ENST00000507784 ENTPD3O75355 529 aa20.65■□□□□ 0.9
RNF4-209ENST00000507784 DHX32Q7L7V1 743 aaKnown RBP20.65■□□□□ 0.9
RNF4-209ENST00000507784 CHST3Q7LGC8 479 aa20.65■□□□□ 0.9
RNF4-209ENST00000507784 DAXXQ9UER7 740 aaPredicted RBP20.65■□□□□ 0.9
RNF4-209ENST00000507784 DDX60LQ5H9U9 1706 aaKnown RBP20.64■□□□□ 0.9
RNF4-209ENST00000507784 ZC3H4Q9UPT8 1303 aaKnown RBP20.64■□□□□ 0.89
RNF4-209ENST00000507784 PRDM1O75626 825 aa20.64■□□□□ 0.89
RNF4-209ENST00000507784 FGD1P98174 961 aa20.64■□□□□ 0.89
RNF4-209ENST00000507784 MKNK2Q9HBH9 465 aa20.64■□□□□ 0.89
RNF4-209ENST00000507784 GLTPD2A6NH11 291 aa20.63■□□□□ 0.89
RNF4-209ENST00000507784 RANBP6O60518 1105 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms