RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 STAG1Q8WVM7 1258 aa6.67□□□□□ -1.34
CLDND1-212ENST00000506885 PMM1Q92871 262 aa6.67□□□□□ -1.34
CLDND1-212ENST00000506885 CARD10Q9BWT7 1032 aa6.67□□□□□ -1.34
CLDND1-212ENST00000506885 TMX1Q9H3N1 280 aa6.67□□□□□ -1.34
CLDND1-212ENST00000506885 LIN7BQ9HAP6 207 aa6.67□□□□□ -1.34
CLDND1-212ENST00000506885 ZFYVE1Q9HBF4 777 aa6.67□□□□□ -1.34
CLDND1-212ENST00000506885 PPP4R2Q9NY27 417 aa6.67□□□□□ -1.34
CLDND1-212ENST00000506885 SPG7Q9UQ90 795 aa6.67□□□□□ -1.34
CLDND1-212ENST00000506885 A0A1W2PP55 124 aa6.66□□□□□ -1.34
CLDND1-212ENST00000506885 POLR3DP05423 398 aaPredicted RBP6.66□□□□□ -1.34
CLDND1-212ENST00000506885 EIF4BP23588 611 aaKnown RBP6.66□□□□□ -1.34
CLDND1-212ENST00000506885 ADAMTSL4Q6UY14 1074 aa6.66□□□□□ -1.34
CLDND1-212ENST00000506885 ACAD11Q709F0 780 aa6.66□□□□□ -1.34
CLDND1-212ENST00000506885 SLC7A3Q8WY07 619 aa6.66□□□□□ -1.34
CLDND1-212ENST00000506885 KLHDC7BQ96G42 594 aa6.66□□□□□ -1.34
CLDND1-212ENST00000506885 HHIPQ96QV1 700 aa6.66□□□□□ -1.34
CLDND1-212ENST00000506885 SRPK1Q96SB4 655 aaKnown RBP6.66□□□□□ -1.34
CLDND1-212ENST00000506885 SLKQ9H2G2 1235 aaPredicted RBP6.66□□□□□ -1.34
CLDND1-212ENST00000506885 TRAK1Q9UPV9 953 aa6.66□□□□□ -1.34
CLDND1-212ENST00000506885 A0A096LPE4 126 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 A0A1W2PPZ6 126 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 EIF1AYO14602 144 aaKnown RBP6.65□□□□□ -1.34
CLDND1-212ENST00000506885 PAX4O43316 350 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 GLB1P16278 677 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 IRX6P78412 446 aaPredicted RBP6.65□□□□□ -1.34
CLDND1-212ENST00000506885 AMPD3Q01432 767 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 UVSSAQ2YD98 709 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 VN1R5Q7Z5H4 357 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 CCDC74AQ96AQ1 378 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 MEGF10Q96KG7 1140 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 CSRNP1Q96S65 589 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 RNF208Q9H0X6 261 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 EHD4Q9H223 541 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 CLEC4MQ9H2X3 399 aaPredicted RBP6.65□□□□□ -1.34
CLDND1-212ENST00000506885 LATS2Q9NRM7 1088 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 SIRPGQ9P1W8 387 aa6.65□□□□□ -1.34
CLDND1-212ENST00000506885 MEGF11A6BM72 1044 aa6.64□□□□□ -1.35
CLDND1-212ENST00000506885 SOX1O00570 391 aaPredicted RBP6.64□□□□□ -1.35
CLDND1-212ENST00000506885 TM4SF5O14894 197 aa6.64□□□□□ -1.35
CLDND1-212ENST00000506885 ALX3O95076 343 aa6.64□□□□□ -1.35
CLDND1-212ENST00000506885 SSBP05455 408 aaKnown RBP eCLIP6.64□□□□□ -1.35
CLDND1-212ENST00000506885 TBX4P57082 545 aa6.64□□□□□ -1.35
CLDND1-212ENST00000506885 ORC1Q13415 861 aa6.64□□□□□ -1.35
CLDND1-212ENST00000506885 HP1BP3Q5SSJ5 553 aaPredicted RBP6.64□□□□□ -1.35
CLDND1-212ENST00000506885 ANKRD34AQ69YU3 496 aa6.64□□□□□ -1.35
CLDND1-212ENST00000506885 FMNL3Q8IVF7 1028 aa6.64□□□□□ -1.35
CLDND1-212ENST00000506885 ZNF408Q9H9D4 720 aa6.64□□□□□ -1.35
CLDND1-212ENST00000506885 DHX15O43143 795 aaKnown RBP6.63□□□□□ -1.35
CLDND1-212ENST00000506885 GADD45BO75293 160 aaPredicted RBP6.63□□□□□ -1.35
CLDND1-212ENST00000506885 CDC45O75419 566 aa6.63□□□□□ -1.35
CLDND1-212ENST00000506885 PDGFRBP09619 1106 aa6.63□□□□□ -1.35
CLDND1-212ENST00000506885 ESRRAP11474 423 aaPredicted RBP6.63□□□□□ -1.35
CLDND1-212ENST00000506885 PRR23CQ6ZRP0 262 aa6.63□□□□□ -1.35
CLDND1-212ENST00000506885 KIAA1211Q6ZU35 1233 aa6.63□□□□□ -1.35
CLDND1-212ENST00000506885 USP31Q70CQ4 1352 aa6.63□□□□□ -1.35
CLDND1-212ENST00000506885 RASGRP4Q8TDF6 673 aa6.63□□□□□ -1.35
CLDND1-212ENST00000506885 JDP2Q8WYK2 163 aa6.63□□□□□ -1.35
CLDND1-212ENST00000506885 CCDC136Q96JN2 1154 aa6.63□□□□□ -1.35
CLDND1-212ENST00000506885 TCF12Q99081 682 aa6.63□□□□□ -1.35
CLDND1-212ENST00000506885 TRIM55Q9BYV6 548 aa6.63□□□□□ -1.35
CLDND1-212ENST00000506885 TYW1Q9NV66 732 aaKnown RBP6.63□□□□□ -1.35
CLDND1-212ENST00000506885 KCNK4Q9NYG8 393 aa6.63□□□□□ -1.35
CLDND1-212ENST00000506885 GSC2O15499 205 aa6.62□□□□□ -1.35
CLDND1-212ENST00000506885 SART1O43290 800 aaKnown RBP6.62□□□□□ -1.35
CLDND1-212ENST00000506885 ADAM11O75078 769 aa6.62□□□□□ -1.35
CLDND1-212ENST00000506885 WISP1O95388 367 aa6.62□□□□□ -1.35
CLDND1-212ENST00000506885 NLRP12P59046 1061 aa6.62□□□□□ -1.35
CLDND1-212ENST00000506885 PCDH1Q08174 1060 aa6.62□□□□□ -1.35
CLDND1-212ENST00000506885 USPL1Q5W0Q7 1092 aa6.62□□□□□ -1.35
CLDND1-212ENST00000506885 PRPF40BQ6NWY9 871 aaKnown RBP6.62□□□□□ -1.35
CLDND1-212ENST00000506885 APBB1IPQ7Z5R6 666 aaPredicted RBP6.62□□□□□ -1.35
CLDND1-212ENST00000506885 AGGF1Q8N302 714 aaeCLIP6.62□□□□□ -1.35
CLDND1-212ENST00000506885 SEC16BQ96JE7 1060 aa6.62□□□□□ -1.35
CLDND1-212ENST00000506885 RUSC1Q9BVN2 902 aa6.62□□□□□ -1.35
CLDND1-212ENST00000506885 NPHS2Q9NP85 383 aa6.62□□□□□ -1.35
CLDND1-212ENST00000506885 SNTG2Q9NY99 539 aa6.62□□□□□ -1.35
CLDND1-212ENST00000506885 ARID1BQ8NFD5 2236 aaPredicted RBP6.62□□□□□ -1.35
CLDND1-212ENST00000506885 DDX3YO15523 660 aaKnown RBP6.61□□□□□ -1.35
CLDND1-212ENST00000506885 CREB3O43889 395 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 CYP11A1P05108 521 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 ITPKAP23677 461 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 CHMP4BP1P59074 171 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 HNRNPUQ00839 825 aaKnown RBP eCLIP6.61□□□□□ -1.35
CLDND1-212ENST00000506885 GSTM4Q03013 218 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 FZD5Q13467 585 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 LRP8Q14114 963 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 RPS26P11Q5JNZ5 115 aaPredicted RBP6.61□□□□□ -1.35
CLDND1-212ENST00000506885 NUTM2GQ5VZR2 741 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 FDX2Q6P4F2 183 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 ANKS3Q6ZW76 656 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 PRPF38AQ8NAV1 312 aaKnown RBP6.61□□□□□ -1.35
CLDND1-212ENST00000506885 UBASH3BQ8TF42 649 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 DEPDC7Q96QD5 511 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 CYP4F12Q9HCS2 524 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 FANCLQ9NW38 375 aa6.61□□□□□ -1.35
CLDND1-212ENST00000506885 PRC1O43663 620 aa6.6□□□□□ -1.35
CLDND1-212ENST00000506885 GRIA4P48058 902 aa6.6□□□□□ -1.35
CLDND1-212ENST00000506885 RASA3Q14644 834 aa6.6□□□□□ -1.35
CLDND1-212ENST00000506885 RALBP1Q15311 655 aa6.6□□□□□ -1.35
CLDND1-212ENST00000506885 TAF1CQ15572 869 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms