RNA–Protein interactions for RNA: ENST00000505454.1

AC116563.1-201, humanhuman

TSL 3 BASIC

Gene AC116563.1, Length 396 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116563.1-201ENST00000505454 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
AC116563.1-201ENST00000505454 CPNE3O75131 537 aaKnown RBP4.43□□□□□ -1.7
AC116563.1-201ENST00000505454 GADD45BO75293 160 aaPredicted RBP4.43□□□□□ -1.7
AC116563.1-201ENST00000505454 GSTP1P09211 210 aaKnown RBP4.43□□□□□ -1.7
AC116563.1-201ENST00000505454 RAP1GAPP47736 663 aa4.43□□□□□ -1.7
AC116563.1-201ENST00000505454 PTPN12Q05209 780 aaKnown RBP4.43□□□□□ -1.7
AC116563.1-201ENST00000505454 FAAP100Q0VG06 881 aa4.43□□□□□ -1.7
AC116563.1-201ENST00000505454 KIF4BQ2VIQ3 1234 aa4.43□□□□□ -1.7
AC116563.1-201ENST00000505454 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.43□□□□□ -1.7
AC116563.1-201ENST00000505454 LIN37Q96GY3 246 aaPredicted RBP4.43□□□□□ -1.7
AC116563.1-201ENST00000505454 TOX2Q96NM4 488 aa4.43□□□□□ -1.7
AC116563.1-201ENST00000505454 ABCB6Q9NP58 842 aa4.43□□□□□ -1.7
AC116563.1-201ENST00000505454 ARID3CA6NKF2 412 aa4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 CFPP27918 469 aa4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 ZP2Q05996 745 aa4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 IKZF1Q13422 519 aa4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 RPS26P11Q5JNZ5 115 aaPredicted RBP4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 FYB2Q5VWT5 728 aa4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 FLAD1Q8NFF5 587 aa4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 ISL2Q96A47 359 aa4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 HEXIM2Q96MH2 286 aaKnown RBP4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 KRT82Q9NSB4 513 aa4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 PCDHGC5Q9Y5F6 944 aa4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 SNX11Q9Y5W9 270 aa4.42□□□□□ -1.7
AC116563.1-201ENST00000505454 ICMTO60725 284 aa4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 NEFMP07197 916 aa4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 HNRNPUQ00839 825 aaKnown RBP eCLIP4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 PRR23BQ6ZRT6 265 aa4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 SYDE1Q6ZW31 735 aaPredicted RBP4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 CILP2Q8IUL8 1156 aa4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 BHLHE22Q8NFJ8 381 aaPredicted RBP4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 ZSCAN18Q8TBC5 510 aaPredicted RBP4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 CCER1Q8TC90 406 aaPredicted RBP4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 ASB11Q8WXH4 323 aa4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 CCDC74AQ96AQ1 378 aa4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 TNKS2Q9H2K2 1166 aa4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 GPN3Q9UHW5 284 aaPredicted RBP4.41□□□□□ -1.7
AC116563.1-201ENST00000505454 EIF1AYO14602 144 aaKnown RBP4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 AFMP43652 599 aa4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 PDE3BQ13370 1112 aa4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 DTHD1Q6ZMT9 781 aa4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 FAM214BQ7L5A3 538 aa4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 ANKLE2Q86XL3 938 aa4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 LRRC56Q8IYG6 542 aaPredicted RBP4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 TMC1Q8TDI8 760 aa4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 NIF3L1Q9GZT8 377 aa4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 TMEM39AQ9NV64 488 aa4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 GTF2IRD1Q9UHL9 959 aa4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 TRAK1Q9UPV9 953 aa4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 CTNND2Q9UQB3 1225 aa4.4□□□□□ -1.71
AC116563.1-201ENST00000505454 NDUFB5O43674 189 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 ZSCAN22P10073 491 aaPredicted RBP4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 FCGRTP55899 365 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 PPP2R3AQ06190 1150 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 GRM2Q14416 872 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 ECM1Q16610 540 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 ZC3H12AQ5D1E8 599 aaKnown RBP4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 MAP1SQ66K74 1059 aaPredicted RBP4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 PRPF40BQ6NWY9 871 aaKnown RBP4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 LILRA6Q6PI73 481 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 MPZL3Q6UWV2 235 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 LCNL1Q6ZST4 164 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 PDZD3Q86UT5 571 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 C1QL4Q86Z23 238 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 GLYCTKQ8IVS8 523 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 RNF214Q8ND24 703 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 STK35Q8TDR2 534 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 EPS8L3Q8TE67 593 aaKnown RBP4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 PPP1R16BQ96T49 567 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 PRDM10Q9NQV6 1147 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 PPP4R2Q9NY27 417 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 CSADQ9Y600 493 aa4.39□□□□□ -1.71
AC116563.1-201ENST00000505454 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.38□□□□□ -1.71
AC116563.1-201ENST00000505454 H3BRB1 525 aa4.38□□□□□ -1.71
AC116563.1-201ENST00000505454 ARNTP27540 789 aa4.38□□□□□ -1.71
AC116563.1-201ENST00000505454 ERVK-24P63145 666 aa4.38□□□□□ -1.71
AC116563.1-201ENST00000505454 NKPD1Q17RQ9 610 aa4.38□□□□□ -1.71
AC116563.1-201ENST00000505454 TMEM67Q5HYA8 995 aa4.38□□□□□ -1.71
AC116563.1-201ENST00000505454 PPM1JQ5JR12 505 aa4.38□□□□□ -1.71
AC116563.1-201ENST00000505454 CYFIP1Q7L576 1253 aa4.38□□□□□ -1.71
AC116563.1-201ENST00000505454 SPACA3Q8IXA5 215 aa4.38□□□□□ -1.71
AC116563.1-201ENST00000505454 KIRREL1Q96J84 757 aa4.38□□□□□ -1.71
AC116563.1-201ENST00000505454 DNAJC25Q9H1X3 360 aa4.38□□□□□ -1.71
AC116563.1-201ENST00000505454 TUT1Q9H6E5 874 aaKnown RBP4.38□□□□□ -1.71
AC116563.1-201ENST00000505454 GNAT3A8MTJ3 354 aa4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 IGF2BP3O00425 579 aaKnown RBP eCLIP4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 PPP1R15AO75807 674 aaPredicted RBP4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 TSPAN15O95858 294 aa4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 GLI1P08151 1106 aa4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 C1QTNF9P0C862 333 aa4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 SERPINB4P48594 390 aa4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 MPRIPQ6WCQ1 1025 aa4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 SIAH1Q8IUQ4 282 aa4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 SULF2Q8IWU5 870 aa4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 GPBAR1Q8TDU6 330 aa4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 ACSBG1Q96GR2 724 aa4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 DIRC2Q96SL1 478 aa4.37□□□□□ -1.71
AC116563.1-201ENST00000505454 FAM129BQ96TA1 746 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms