RNA–Protein interactions for RNA: ENST00000500215.3

LINC02288-201, Transcript of long intergenic non-protein coding RNA 2288, humanhuman

TSL 2 BASIC

Gene LINC02288, Length 2,924 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02288-201ENST00000500215 TAOK3Q9H2K8 898 aa13.85□□□□□ -0.19
LINC02288-201ENST00000500215 LIMCH1Q9UPQ0 1083 aa13.85□□□□□ -0.19
LINC02288-201ENST00000500215 PLCD1P51178 756 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 NFIAQ12857 509 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 FAM47AQ5JRC9 791 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 MB21D2Q8IYB1 491 aaPredicted RBP13.84□□□□□ -0.19
LINC02288-201ENST00000500215 NCOA7Q8NI08 942 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 IL17RAQ96F46 866 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 CD2APQ9Y5K6 639 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 KIF13BQ9NQT8 1826 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 NMT2O60551 498 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 GNAT2P19087 354 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 IARSP41252 1262 aaKnown RBP13.84□□□□□ -0.19
LINC02288-201ENST00000500215 RHBDL3P58872 404 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 TRDNQ13061 729 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 MFSD6Q6ZSS7 791 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 DDX4Q9NQI0 724 aaKnown RBP13.84□□□□□ -0.19
LINC02288-201ENST00000500215 RANBP6O60518 1105 aaKnown RBP13.84□□□□□ -0.19
LINC02288-201ENST00000500215 GSTO1P78417 241 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 AKNAD1Q5T1N1 836 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 ZSWIM5Q9P217 1185 aa13.84□□□□□ -0.19
LINC02288-201ENST00000500215 FAM196BA6NMK8 535 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 BAG3O95817 575 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 CRKP46108 304 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 CC2D2BQ6DHV5 1058 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 ZFPM1Q8IX07 1006 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 NIM1KQ8IY84 436 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 MTMR7Q9Y216 660 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 LDHCP07864 332 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 EXOSC10Q01780 885 aaKnown RBP13.83□□□□□ -0.2
LINC02288-201ENST00000500215 RBM26Q5T8P6 1007 aaKnown RBP13.83□□□□□ -0.2
LINC02288-201ENST00000500215 STRIP1Q5VSL9 837 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 ARHGAP27Q6ZUM4 889 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 SUPT20HQ8NEM7 779 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 DDX11Q96FC9 970 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 USP40Q9NVE5 1235 aa13.83□□□□□ -0.2
LINC02288-201ENST00000500215 GPR75-ASB3A0A0A6YYF3 556 aa13.82□□□□□ -0.2
LINC02288-201ENST00000500215 CLRN2A0PK11 232 aa13.82□□□□□ -0.2
LINC02288-201ENST00000500215 JAK2O60674 1132 aa13.82□□□□□ -0.2
LINC02288-201ENST00000500215 POLR3DP05423 398 aaPredicted RBP13.82□□□□□ -0.2
LINC02288-201ENST00000500215 TICAM2Q86XR7 235 aa13.82□□□□□ -0.2
LINC02288-201ENST00000500215 PSMD1Q99460 953 aa13.82□□□□□ -0.2
LINC02288-201ENST00000500215 TDRD3Q9H7E2 651 aaKnown RBP13.82□□□□□ -0.2
LINC02288-201ENST00000500215 BRPF3Q9ULD4 1205 aa13.82□□□□□ -0.2
LINC02288-201ENST00000500215 GJA3Q9Y6H8 435 aa13.82□□□□□ -0.2
LINC02288-201ENST00000500215 CXCL9Q07325 125 aa13.82□□□□□ -0.2
LINC02288-201ENST00000500215 ALX1Q15699 326 aa13.82□□□□□ -0.2
LINC02288-201ENST00000500215 APOBEC3HQ6NTF7 200 aaKnown RBP13.82□□□□□ -0.2
LINC02288-201ENST00000500215 TEKT1Q969V4 418 aa13.82□□□□□ -0.2
LINC02288-201ENST00000500215 BRCA1P38398 1863 aaKnown RBP13.82□□□□□ -0.2
LINC02288-201ENST00000500215 MCM5P33992 734 aa13.81□□□□□ -0.2
LINC02288-201ENST00000500215 CDC42EP5Q6NZY7 148 aa13.81□□□□□ -0.2
LINC02288-201ENST00000500215 FLT1P17948 1338 aa13.81□□□□□ -0.2
LINC02288-201ENST00000500215 SYT17Q9BSW7 474 aa13.81□□□□□ -0.2
LINC02288-201ENST00000500215 BAZ2BQ9UIF8 2168 aaKnown RBP13.81□□□□□ -0.2
LINC02288-201ENST00000500215 MAST2Q6P0Q8 1798 aa13.81□□□□□ -0.2
LINC02288-201ENST00000500215 KLF18A0A0U1RQI7 1052 aa13.8□□□□□ -0.2
LINC02288-201ENST00000500215 EGFRP00533 1210 aa13.8□□□□□ -0.2
LINC02288-201ENST00000500215 MICU3Q86XE3 530 aa13.8□□□□□ -0.2
LINC02288-201ENST00000500215 JDP2Q8WYK2 163 aa13.8□□□□□ -0.2
LINC02288-201ENST00000500215 PRMT6Q96LA8 375 aaPredicted RBP13.8□□□□□ -0.2
LINC02288-201ENST00000500215 GAKO14976 1311 aa13.8□□□□□ -0.2
LINC02288-201ENST00000500215 IFIT3O14879 490 aaKnown RBP13.8□□□□□ -0.2
LINC02288-201ENST00000500215 CFAP100Q494V2 611 aa13.8□□□□□ -0.2
LINC02288-201ENST00000500215 WDHD1O75717 1129 aaPredicted RBP13.8□□□□□ -0.2
LINC02288-201ENST00000500215 MCM2P49736 904 aa13.8□□□□□ -0.2
LINC02288-201ENST00000500215 SCRN1Q12765 414 aa13.8□□□□□ -0.2
LINC02288-201ENST00000500215 TPRNQ4KMQ1 711 aa13.8□□□□□ -0.2
LINC02288-201ENST00000500215 TMEM67Q5HYA8 995 aa13.8□□□□□ -0.2
LINC02288-201ENST00000500215 CMTR1Q8N1G2 835 aaKnown RBP13.8□□□□□ -0.2
LINC02288-201ENST00000500215 CCDC82Q8N4S0 544 aa13.8□□□□□ -0.2
LINC02288-201ENST00000500215 ATP8A2Q9NTI2 1148 aa13.8□□□□□ -0.2
LINC02288-201ENST00000500215 MKRN1Q9UHC7 482 aaKnown RBP13.8□□□□□ -0.2
LINC02288-201ENST00000500215 PPP4CP60510 307 aa13.79□□□□□ -0.2
LINC02288-201ENST00000500215 CUL4AQ13619 759 aa13.79□□□□□ -0.2
LINC02288-201ENST00000500215 NFXL1Q6ZNB6 911 aa13.79□□□□□ -0.2
LINC02288-201ENST00000500215 CLEC10AQ8IUN9 316 aa13.79□□□□□ -0.2
LINC02288-201ENST00000500215 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
LINC02288-201ENST00000500215 CDK5RAP2Q96SN8 1893 aa13.79□□□□□ -0.2
LINC02288-201ENST00000500215 GOLGA8BA8MQT2 603 aa13.79□□□□□ -0.2
LINC02288-201ENST00000500215 GJB2P29033 226 aa13.79□□□□□ -0.2
LINC02288-201ENST00000500215 SHROOM1Q2M3G4 852 aaPredicted RBP13.79□□□□□ -0.2
LINC02288-201ENST00000500215 RSBN1LQ6PCB5 846 aaPredicted RBP13.79□□□□□ -0.2
LINC02288-201ENST00000500215 STAG1Q8WVM7 1258 aa13.79□□□□□ -0.2
LINC02288-201ENST00000500215 CHMP5Q9NZZ3 219 aa13.79□□□□□ -0.2
LINC02288-201ENST00000500215 DDIT3P35638 169 aa13.78□□□□□ -0.2
LINC02288-201ENST00000500215 ZSCAN29Q8IWY8 852 aaPredicted RBP13.78□□□□□ -0.2
LINC02288-201ENST00000500215 TCP10L2B9ZVM9 353 aa13.78□□□□□ -0.2
LINC02288-201ENST00000500215 UBE2Q2LH0YL09 131 aa13.78□□□□□ -0.2
LINC02288-201ENST00000500215 HMGB1P09429 215 aaKnown RBP13.78□□□□□ -0.2
LINC02288-201ENST00000500215 YBX3P16989 372 aaKnown RBP eCLIP13.78□□□□□ -0.2
LINC02288-201ENST00000500215 C12orf60Q5U649 245 aa13.78□□□□□ -0.2
LINC02288-201ENST00000500215 CDAN1Q8IWY9 1227 aa13.78□□□□□ -0.2
LINC02288-201ENST00000500215 SMC3Q9UQE7 1217 aa13.78□□□□□ -0.2
LINC02288-201ENST00000500215 PDIA3P30101 505 aaKnown RBP13.77□□□□□ -0.2
LINC02288-201ENST00000500215 RASGRP2Q7LDG7 609 aa13.77□□□□□ -0.2
LINC02288-201ENST00000500215 NUP133Q8WUM0 1156 aa13.77□□□□□ -0.2
LINC02288-201ENST00000500215 VEZTQ9HBM0 779 aa13.77□□□□□ -0.2
LINC02288-201ENST00000500215 FER1L6Q2WGJ9 1857 aa13.77□□□□□ -0.2
LINC02288-201ENST00000500215 SLF2Q8IX21 1173 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms