RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 LCNL1Q6ZST4 164 aa5.04□□□□□ -1.6
SGMS1-205ENST00000498514 SYDE1Q6ZW31 735 aaPredicted RBP5.04□□□□□ -1.6
SGMS1-205ENST00000498514 C1QL4Q86Z23 238 aa5.04□□□□□ -1.6
SGMS1-205ENST00000498514 ASB11Q8WXH4 323 aa5.04□□□□□ -1.6
SGMS1-205ENST00000498514 LIN37Q96GY3 246 aaPredicted RBP5.04□□□□□ -1.6
SGMS1-205ENST00000498514 ZC3H12CQ9C0D7 883 aaKnown RBP5.04□□□□□ -1.6
SGMS1-205ENST00000498514 TNKS2Q9H2K2 1166 aa5.04□□□□□ -1.6
SGMS1-205ENST00000498514 MTMR7Q9Y216 660 aa5.04□□□□□ -1.6
SGMS1-205ENST00000498514 NCANO14594 1321 aa5.03□□□□□ -1.6
SGMS1-205ENST00000498514 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.03□□□□□ -1.6
SGMS1-205ENST00000498514 ZSCAN22P10073 491 aaPredicted RBP5.03□□□□□ -1.6
SGMS1-205ENST00000498514 HCLS1P14317 486 aaPredicted RBP5.03□□□□□ -1.6
SGMS1-205ENST00000498514 AFMP43652 599 aa5.03□□□□□ -1.6
SGMS1-205ENST00000498514 IKZF1Q13422 519 aa5.03□□□□□ -1.6
SGMS1-205ENST00000498514 KIF4BQ2VIQ3 1234 aa5.03□□□□□ -1.6
SGMS1-205ENST00000498514 RPS26P11Q5JNZ5 115 aaPredicted RBP5.03□□□□□ -1.6
SGMS1-205ENST00000498514 USPL1Q5W0Q7 1092 aa5.03□□□□□ -1.6
SGMS1-205ENST00000498514 TOP6BLQ8N6T0 577 aa5.03□□□□□ -1.6
SGMS1-205ENST00000498514 SSU72Q9NP77 194 aaKnown RBP5.03□□□□□ -1.6
SGMS1-205ENST00000498514 KRT82Q9NSB4 513 aa5.03□□□□□ -1.6
SGMS1-205ENST00000498514 CTNND2Q9UQB3 1225 aa5.03□□□□□ -1.6
SGMS1-205ENST00000498514 PCDHGC5Q9Y5F6 944 aa5.03□□□□□ -1.6
SGMS1-205ENST00000498514 B8ZZF3 427 aa5.02□□□□□ -1.61
SGMS1-205ENST00000498514 GSTP1P09211 210 aaKnown RBP5.02□□□□□ -1.61
SGMS1-205ENST00000498514 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.02□□□□□ -1.61
SGMS1-205ENST00000498514 HEXIM2Q96MH2 286 aaKnown RBP5.02□□□□□ -1.61
SGMS1-205ENST00000498514 GTF2IRD1Q9UHL9 959 aa5.02□□□□□ -1.61
SGMS1-205ENST00000498514 GLI1P08151 1106 aa5.01□□□□□ -1.61
SGMS1-205ENST00000498514 ZNF157P51786 506 aaPredicted RBP5.01□□□□□ -1.61
SGMS1-205ENST00000498514 FYB2Q5VWT5 728 aa5.01□□□□□ -1.61
SGMS1-205ENST00000498514 MPZL3Q6UWV2 235 aa5.01□□□□□ -1.61
SGMS1-205ENST00000498514 PRR23BQ6ZRT6 265 aa5.01□□□□□ -1.61
SGMS1-205ENST00000498514 ABCB6Q9NP58 842 aa5.01□□□□□ -1.61
SGMS1-205ENST00000498514 LMCD1Q9NZU5 365 aa5.01□□□□□ -1.61
SGMS1-205ENST00000498514 RAPGEFL1Q9UHV5 662 aa5.01□□□□□ -1.61
SGMS1-205ENST00000498514 TMEM238LA0A1B0GVL6 79 aa5□□□□□ -1.61
SGMS1-205ENST00000498514 IGF2BP3O00425 579 aaKnown RBP eCLIP5□□□□□ -1.61
SGMS1-205ENST00000498514 CPNE3O75131 537 aaKnown RBP5□□□□□ -1.61
SGMS1-205ENST00000498514 ABL1P00519 1130 aa5□□□□□ -1.61
SGMS1-205ENST00000498514 NEFMP07197 916 aa5□□□□□ -1.61
SGMS1-205ENST00000498514 C1QTNF9P0C862 333 aa5□□□□□ -1.61
SGMS1-205ENST00000498514 ECM1Q16610 540 aa5□□□□□ -1.61
SGMS1-205ENST00000498514 TMEM67Q5HYA8 995 aa5□□□□□ -1.61
SGMS1-205ENST00000498514 PRPF40BQ6NWY9 871 aaKnown RBP5□□□□□ -1.61
SGMS1-205ENST00000498514 TTLL10Q6ZVT0 673 aa5□□□□□ -1.61
SGMS1-205ENST00000498514 ISL2Q96A47 359 aa5□□□□□ -1.61
SGMS1-205ENST00000498514 CCDC97Q96F63 343 aaPredicted RBP5□□□□□ -1.61
SGMS1-205ENST00000498514 KIRREL1Q96J84 757 aa5□□□□□ -1.61
SGMS1-205ENST00000498514 NPHS2Q9NP85 383 aa5□□□□□ -1.61
SGMS1-205ENST00000498514 ANO2Q9NQ90 1003 aa5□□□□□ -1.61
SGMS1-205ENST00000498514 NFIBO00712 420 aa4.99□□□□□ -1.61
SGMS1-205ENST00000498514 FAAP100Q0VG06 881 aa4.99□□□□□ -1.61
SGMS1-205ENST00000498514 ZNF211Q13398 564 aaPredicted RBP4.99□□□□□ -1.61
SGMS1-205ENST00000498514 FAM214BQ7L5A3 538 aa4.99□□□□□ -1.61
SGMS1-205ENST00000498514 SPACA3Q8IXA5 215 aa4.99□□□□□ -1.61
SGMS1-205ENST00000498514 RNF214Q8ND24 703 aa4.99□□□□□ -1.61
SGMS1-205ENST00000498514 KCNB2Q92953 911 aa4.99□□□□□ -1.61
SGMS1-205ENST00000498514 SERPINA10Q9UK55 444 aa4.99□□□□□ -1.61
SGMS1-205ENST00000498514 BRPF3Q9ULD4 1205 aa4.99□□□□□ -1.61
SGMS1-205ENST00000498514 TMEM88BA6NKF7 163 aa4.98□□□□□ -1.61
SGMS1-205ENST00000498514 GADD45BO75293 160 aaPredicted RBP4.98□□□□□ -1.61
SGMS1-205ENST00000498514 BUD31P41223 144 aaPredicted RBP4.98□□□□□ -1.61
SGMS1-205ENST00000498514 PPP2R3AQ06190 1150 aa4.98□□□□□ -1.61
SGMS1-205ENST00000498514 CYFIP1Q7L576 1253 aa4.98□□□□□ -1.61
SGMS1-205ENST00000498514 AMIGO3Q86WK7 504 aa4.98□□□□□ -1.61
SGMS1-205ENST00000498514 FBXO15Q8NCQ5 510 aaPredicted RBP4.98□□□□□ -1.61
SGMS1-205ENST00000498514 KRT1P04264 644 aa4.97□□□□□ -1.61
SGMS1-205ENST00000498514 CLCN7P51798 805 aa4.97□□□□□ -1.61
SGMS1-205ENST00000498514 ERVK-24P63145 666 aa4.97□□□□□ -1.61
SGMS1-205ENST00000498514 ORC1Q13415 861 aa4.97□□□□□ -1.61
SGMS1-205ENST00000498514 NKPD1Q17RQ9 610 aa4.97□□□□□ -1.61
SGMS1-205ENST00000498514 ZC3H12AQ5D1E8 599 aaKnown RBP4.97□□□□□ -1.61
SGMS1-205ENST00000498514 PDZD3Q86UT5 571 aa4.97□□□□□ -1.61
SGMS1-205ENST00000498514 PRDM10Q9NQV6 1147 aa4.97□□□□□ -1.61
SGMS1-205ENST00000498514 TMEM39AQ9NV64 488 aa4.97□□□□□ -1.61
SGMS1-205ENST00000498514 TRAK1Q9UPV9 953 aa4.97□□□□□ -1.61
SGMS1-205ENST00000498514 PITPNM2Q9BZ72 1349 aa4.97□□□□□ -1.61
SGMS1-205ENST00000498514 GNAT3A8MTJ3 354 aa4.96□□□□□ -1.62
SGMS1-205ENST00000498514 NPIPB6E9PJ23 425 aa4.96□□□□□ -1.62
SGMS1-205ENST00000498514 TMEM253P0C7T8 217 aa4.96□□□□□ -1.62
SGMS1-205ENST00000498514 PDE3BQ13370 1112 aa4.96□□□□□ -1.62
SGMS1-205ENST00000498514 PHLDB3Q6NSJ2 640 aa4.96□□□□□ -1.62
SGMS1-205ENST00000498514 CCDC74AQ96AQ1 378 aa4.96□□□□□ -1.62
SGMS1-205ENST00000498514 NSUN3Q9H649 340 aaKnown RBP4.96□□□□□ -1.62
SGMS1-205ENST00000498514 GPN3Q9UHW5 284 aaPredicted RBP4.96□□□□□ -1.62
SGMS1-205ENST00000498514 GDNFP39905 211 aa4.95□□□□□ -1.62
SGMS1-205ENST00000498514 DTHD1Q6ZMT9 781 aa4.95□□□□□ -1.62
SGMS1-205ENST00000498514 DIRC2Q96SL1 478 aa4.95□□□□□ -1.62
SGMS1-205ENST00000498514 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
SGMS1-205ENST00000498514 CARS2Q9HA77 564 aaKnown RBP4.95□□□□□ -1.62
SGMS1-205ENST00000498514 NDUFB5O43674 189 aa4.94□□□□□ -1.62
SGMS1-205ENST00000498514 INHBBP09529 407 aa4.94□□□□□ -1.62
SGMS1-205ENST00000498514 ARNTP27540 789 aa4.94□□□□□ -1.62
SGMS1-205ENST00000498514 GRM2Q14416 872 aa4.94□□□□□ -1.62
SGMS1-205ENST00000498514 MAP1SQ66K74 1059 aaPredicted RBP4.94□□□□□ -1.62
SGMS1-205ENST00000498514 CIAPIN1Q6FI81 312 aa4.94□□□□□ -1.62
SGMS1-205ENST00000498514 SULF2Q8IWU5 870 aa4.94□□□□□ -1.62
SGMS1-205ENST00000498514 FOXQ1Q9C009 403 aa4.94□□□□□ -1.62
SGMS1-205ENST00000498514 DNAJC25Q9H1X3 360 aa4.94□□□□□ -1.62
SGMS1-205ENST00000498514 C19orf73Q9NVV2 129 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms