RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 APOBEC3HQ6NTF7 200 aaKnown RBP11.87□□□□□ -0.51
C4A-258ENST00000496659 SDR42E1Q8WUS8 393 aa11.87□□□□□ -0.51
C4A-258ENST00000496659 TBC1D32Q96NH3 1257 aa11.87□□□□□ -0.51
C4A-258ENST00000496659 IDI2Q9BXS1 227 aa11.87□□□□□ -0.51
C4A-258ENST00000496659 ADARB2Q9NS39 739 aaKnown RBP11.87□□□□□ -0.51
C4A-258ENST00000496659 SCN4AP35499 1836 aa11.87□□□□□ -0.51
C4A-258ENST00000496659 FLT1P17948 1338 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 PRKAB2O43741 272 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 ENTPD3O75355 529 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 ITGBL1O95965 494 aaPredicted RBP11.86□□□□□ -0.51
C4A-258ENST00000496659 HLA-DOAP06340 250 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 NT5C2P49902 561 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 PICALMQ13492 652 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 SPDYE2Q495Y8 402 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 EAPPQ56P03 285 aaPredicted RBP11.86□□□□□ -0.51
C4A-258ENST00000496659 FKBP1CQ5VVH2 108 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 CDC42EP5Q6NZY7 148 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 IL27Q8NEV9 243 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 TGFBRAP1Q8WUH2 860 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 RNF41Q9H4P4 317 aaPredicted RBP11.86□□□□□ -0.51
C4A-258ENST00000496659 EPB41L4AQ9HCS5 686 aaPredicted RBP11.86□□□□□ -0.51
C4A-258ENST00000496659 DCP1AQ9NPI6 582 aaPredicted RBP11.86□□□□□ -0.51
C4A-258ENST00000496659 MCM9Q9NXL9 1143 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 HACL1Q9UJ83 578 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
C4A-258ENST00000496659 COL2A1P02458 1487 aaPredicted RBP11.86□□□□□ -0.51
C4A-258ENST00000496659 LAMB1P07942 1786 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 WNT10BO00744 389 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 FGAP02671 866 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 PCP11498 1178 aaKnown RBP11.85□□□□□ -0.51
C4A-258ENST00000496659 PSMA5P28066 241 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 EPHX2P34913 555 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 NECTIN1Q15223 517 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 TBC1D10BQ4KMP7 808 aaPredicted RBP11.85□□□□□ -0.51
C4A-258ENST00000496659 SBK1Q52WX2 424 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 CREB3L3Q68CJ9 461 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 TTC6Q86TZ1 520 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 LDHDQ86WU2 507 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 APOBEC3FQ8IUX4 373 aaKnown RBP11.85□□□□□ -0.51
C4A-258ENST00000496659 MAPKAPK5Q8IW41 473 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 ZBED3Q96IU2 234 aaPredicted RBP11.85□□□□□ -0.51
C4A-258ENST00000496659 PRMT6Q96LA8 375 aaPredicted RBP11.85□□□□□ -0.51
C4A-258ENST00000496659 OSBPL5Q9H0X9 879 aaPredicted RBP11.85□□□□□ -0.51
C4A-258ENST00000496659 DHX36Q9H2U1 1008 aaKnown RBP11.85□□□□□ -0.51
C4A-258ENST00000496659 TDRD3Q9H7E2 651 aaKnown RBP11.85□□□□□ -0.51
C4A-258ENST00000496659 VEZTQ9HBM0 779 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 ZNF287Q9HBT7 754 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 ZNF70Q9UC06 446 aaPredicted RBP11.85□□□□□ -0.51
C4A-258ENST00000496659 LAMA4Q16363 1823 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 FOCADQ5VW36 1801 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 ECM29Q5VYK3 1845 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 PASKQ96RG2 1323 aa11.85□□□□□ -0.51
C4A-258ENST00000496659 DDX60LQ5H9U9 1706 aaKnown RBP11.84□□□□□ -0.51
C4A-258ENST00000496659 SLC27A2O14975 620 aa11.84□□□□□ -0.51
C4A-258ENST00000496659 WDHD1O75717 1129 aaPredicted RBP11.84□□□□□ -0.51
C4A-258ENST00000496659 POLR3DP05423 398 aaPredicted RBP11.84□□□□□ -0.51
C4A-258ENST00000496659 EPS15P42566 896 aa11.84□□□□□ -0.51
C4A-258ENST00000496659 PPARAQ07869 468 aa11.84□□□□□ -0.51
C4A-258ENST00000496659 TRDNQ13061 729 aa11.84□□□□□ -0.51
C4A-258ENST00000496659 RBM26Q5T8P6 1007 aaKnown RBP11.84□□□□□ -0.51
C4A-258ENST00000496659 MAP1SQ66K74 1059 aaPredicted RBP11.84□□□□□ -0.51
C4A-258ENST00000496659 USP50Q70EL3 339 aaPredicted RBP11.84□□□□□ -0.51
C4A-258ENST00000496659 RALYLQ86SE5 291 aaKnown RBP11.84□□□□□ -0.51
C4A-258ENST00000496659 TRIM34Q9BYJ4 488 aa11.84□□□□□ -0.51
C4A-258ENST00000496659 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
C4A-258ENST00000496659 ROBO3Q96MS0 1386 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 CLRN2A0PK11 232 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 MINDY4BA8MYZ0 360 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 USP17L12C9JPN9 530 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 USP17L21D6R901 530 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 FOXP2O15409 715 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 CYP21A2P08686 494 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 HMGB1P09429 215 aaKnown RBP11.83□□□□□ -0.52
C4A-258ENST00000496659 FMR1Q06787 632 aaKnown RBP eCLIP11.83□□□□□ -0.52
C4A-258ENST00000496659 PDE4BQ07343 736 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 SAMD7Q7Z3H4 446 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 FAM83AQ86UY5 434 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 PNMA8AQ86V59 439 aaPredicted RBP11.83□□□□□ -0.52
C4A-258ENST00000496659 KCNB2Q92953 911 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 HOOK2Q96ED9 719 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 CNNM2Q9H8M5 875 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 MKRN1Q9UHC7 482 aaKnown RBP11.83□□□□□ -0.52
C4A-258ENST00000496659 ANAPC4Q9UJX5 808 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 PPP2R3BQ9Y5P8 575 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 PITPNM2Q9BZ72 1349 aa11.83□□□□□ -0.52
C4A-258ENST00000496659 PCNTO95613 3336 aa11.82□□□□□ -0.52
C4A-258ENST00000496659 RABEP1Q15276 862 aa11.82□□□□□ -0.52
C4A-258ENST00000496659 NBPF9Q3BBW0 867 aa11.82□□□□□ -0.52
C4A-258ENST00000496659 TSGA10IPQ3SY00 556 aa11.82□□□□□ -0.52
C4A-258ENST00000496659 COL13A1Q5TAT6 717 aaPredicted RBP11.82□□□□□ -0.52
C4A-258ENST00000496659 CTR9Q6PD62 1173 aa11.82□□□□□ -0.52
C4A-258ENST00000496659 ZSCAN29Q8IWY8 852 aaPredicted RBP11.82□□□□□ -0.52
C4A-258ENST00000496659 FAM151AQ8WW52 585 aa11.82□□□□□ -0.52
C4A-258ENST00000496659 KRT23Q9C075 422 aa11.82□□□□□ -0.52
C4A-258ENST00000496659 CREBZFQ9NS37 354 aa11.82□□□□□ -0.52
C4A-258ENST00000496659 PCDHAC2Q9Y5I4 1007 aa11.82□□□□□ -0.52
C4A-258ENST00000496659 SNX14Q9Y5W7 946 aa11.82□□□□□ -0.52
C4A-258ENST00000496659 ATRNL1Q5VV63 1379 aa11.81□□□□□ -0.52
C4A-258ENST00000496659 CDK5RAP2Q96SN8 1893 aa11.81□□□□□ -0.52
C4A-258ENST00000496659 SHTN1A0MZ66 631 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms