RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 CTDNEP1O95476 244 aa21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 PCP11498 1178 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 CCT2P78371 535 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 CHAMP1Q96JM3 812 aa21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 TMX4Q9H1E5 349 aaPredicted RBP21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 ATP8A2Q9NTI2 1148 aa21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 AATFQ9NY61 560 aaKnown RBP eCLIP21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 A0A0U1RQG5 324 aaPredicted RBP21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 PTPDC1A2A3K4 754 aa21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 GOLGA8BA8MQT2 603 aa21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 BAG6P46379 1132 aa21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 SF3B2Q13435 895 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 FAM184AQ8NB25 1140 aa21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 ZSWIM5Q9P217 1185 aa21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 R3HCC1Q9Y3T6 440 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 KDM4AO75164 1064 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 LIFRP42702 1097 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 SGMS1Q86VZ5 419 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 IGDCC4Q8TDY8 1250 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 TBC1D22AQ8WUA7 517 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 NCOA5Q9HCD5 579 aaKnown RBP21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 CCDC39Q9UFE4 941 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 HPS5Q9UPZ3 1129 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 TACC3Q9Y6A5 838 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 LDHCP07864 332 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 STYK1Q6J9G0 422 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 MPNDQ8N594 471 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 TMEM87AQ8NBN3 555 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 NKX2-3Q8TAU0 364 aa21.67■■□□□ 1.06
TSPAN4-212ENST00000494815 CSPP1Q1MSJ5 1256 aa21.66■■□□□ 1.06
TSPAN4-212ENST00000494815 CDC37L1Q7L3B6 337 aa21.66■■□□□ 1.06
TSPAN4-212ENST00000494815 CERS3Q8IU89 383 aa21.66■■□□□ 1.06
TSPAN4-212ENST00000494815 COA1Q9GZY4 146 aa21.66■■□□□ 1.06
TSPAN4-212ENST00000494815 FAM205AQ6ZU69 1335 aa21.66■■□□□ 1.06
TSPAN4-212ENST00000494815 MINDY4BA8MYZ0 360 aa21.65■■□□□ 1.06
TSPAN4-212ENST00000494815 SART3Q15020 963 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-212ENST00000494815 C2CD5Q86YS7 1000 aa21.65■■□□□ 1.06
TSPAN4-212ENST00000494815 DDX11Q96FC9 970 aa21.65■■□□□ 1.06
TSPAN4-212ENST00000494815 DCP1AQ9NPI6 582 aaPredicted RBP21.65■■□□□ 1.06
TSPAN4-212ENST00000494815 INCENPQ9NQS7 918 aa21.65■■□□□ 1.06
TSPAN4-212ENST00000494815 H0YIN7 160 aa21.65■■□□□ 1.06
TSPAN4-212ENST00000494815 TMEM67Q5HYA8 995 aa21.65■■□□□ 1.06
TSPAN4-212ENST00000494815 LY9Q9HBG7 655 aa21.65■■□□□ 1.06
TSPAN4-212ENST00000494815 BAG3O95817 575 aa21.64■■□□□ 1.06
TSPAN4-212ENST00000494815 PPP4CP60510 307 aa21.64■■□□□ 1.06
TSPAN4-212ENST00000494815 CTR9Q6PD62 1173 aa21.64■■□□□ 1.06
TSPAN4-212ENST00000494815 DPP8Q6V1X1 898 aaPredicted RBP21.64■■□□□ 1.06
TSPAN4-212ENST00000494815 TOMM22Q9NS69 142 aa21.64■■□□□ 1.06
TSPAN4-212ENST00000494815 IFIT3O14879 490 aaKnown RBP21.64■■□□□ 1.05
TSPAN4-212ENST00000494815 FGRP09769 529 aa21.64■■□□□ 1.05
TSPAN4-212ENST00000494815 FOXD4L6Q3SYB3 417 aaPredicted RBP21.64■■□□□ 1.05
TSPAN4-212ENST00000494815 APOA5Q6Q788 366 aa21.64■■□□□ 1.05
TSPAN4-212ENST00000494815 FOXD4L3Q6VB84 417 aaPredicted RBP21.64■■□□□ 1.05
TSPAN4-212ENST00000494815 ESR2Q92731 530 aa21.64■■□□□ 1.05
TSPAN4-212ENST00000494815 ZC3H12CQ9C0D7 883 aaKnown RBP21.64■■□□□ 1.05
TSPAN4-212ENST00000494815 ARPP21Q9UBL0 812 aaPredicted RBP21.64■■□□□ 1.05
TSPAN4-212ENST00000494815 MROH7-TTC4A0A0A0MT08 1334 aa21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 SBK1Q52WX2 424 aa21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 RRP12Q5JTH9 1297 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 ZNF622Q969S3 477 aaKnown RBP eCLIP21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 MAP7D2Q96T17 732 aa21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 NOL10Q9BSC4 688 aaKnown RBP21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 USP17L12C9JPN9 530 aa21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 USP17L21D6R901 530 aa21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 H3BQV1 296 aa21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 GRIK5Q16478 980 aa21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 MFSD14BQ5SR56 506 aa21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 IFFO2Q5TF58 517 aa21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 TMTC2Q8N394 836 aa21.63■■□□□ 1.05
TSPAN4-212ENST00000494815 CPLX1O14810 134 aa21.62■■□□□ 1.05
TSPAN4-212ENST00000494815 SLF2Q8IX21 1173 aa21.62■■□□□ 1.05
TSPAN4-212ENST00000494815 BAZ2AQ9UIF9 1905 aaKnown RBP21.62■■□□□ 1.05
TSPAN4-212ENST00000494815 ERICH2A1L162 156 aa21.61■■□□□ 1.05
TSPAN4-212ENST00000494815 METAP2P50579 478 aaKnown RBP eCLIP21.61■■□□□ 1.05
TSPAN4-212ENST00000494815 DIXDC1Q155Q3 683 aa21.61■■□□□ 1.05
TSPAN4-212ENST00000494815 NFXL1Q6ZNB6 911 aa21.61■■□□□ 1.05
TSPAN4-212ENST00000494815 CNPY2Q9Y2B0 182 aa21.61■■□□□ 1.05
TSPAN4-212ENST00000494815 SUGT1Q9Y2Z0 365 aa21.61■■□□□ 1.05
TSPAN4-212ENST00000494815 ZBTB43O43298 467 aa21.61■■□□□ 1.05
TSPAN4-212ENST00000494815 SLC3A2P08195 630 aaKnown RBP21.61■■□□□ 1.05
TSPAN4-212ENST00000494815 USP48Q86UV5 1035 aa21.61■■□□□ 1.05
TSPAN4-212ENST00000494815 FAM163AQ96GL9 167 aaPredicted RBP21.61■■□□□ 1.05
TSPAN4-212ENST00000494815 EYA3Q99504 573 aa21.61■■□□□ 1.05
TSPAN4-212ENST00000494815 PRDM4Q9UKN5 801 aa21.61■■□□□ 1.05
TSPAN4-212ENST00000494815 RCAN1P53805 252 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 CNKSR1Q969H4 720 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 SYAP1Q96A49 352 aaPredicted RBP21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 UBAC1Q9BSL1 405 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 RTFDC1Q9BY42 306 aaPredicted RBP21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 ZSCAN16Q9H4T2 348 aaPredicted RBP21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 MKRN1Q9UHC7 482 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 SLC12A7Q9Y666 1083 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 NID2Q14112 1375 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 UQCRHLA0A096LP55 91 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 CCDC69A6NI79 296 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 RIMBP2O15034 1052 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 ORC4O43929 436 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 CDKL5O76039 1030 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 UQCRHP07919 91 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 NT5C2P49902 561 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms