RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 SIPA1L1O43166 1804 aa12.92□□□□□ -0.34
ZIC4-216ENST00000494569 GTF2E1P29083 439 aaPredicted RBP12.92□□□□□ -0.34
ZIC4-216ENST00000494569 GIMAP6Q6P9H5 292 aa12.92□□□□□ -0.34
ZIC4-216ENST00000494569 TMEM87BQ96K49 555 aa12.92□□□□□ -0.34
ZIC4-216ENST00000494569 BRIP1Q9BX63 1249 aa12.92□□□□□ -0.34
ZIC4-216ENST00000494569 TDRD7Q8NHU6 1098 aaKnown RBP12.91□□□□□ -0.34
ZIC4-216ENST00000494569 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
ZIC4-216ENST00000494569 SERPINB2P05120 415 aa12.91□□□□□ -0.34
ZIC4-216ENST00000494569 HIBADHP31937 336 aaKnown RBP12.91□□□□□ -0.34
ZIC4-216ENST00000494569 LIFRP42702 1097 aa12.91□□□□□ -0.34
ZIC4-216ENST00000494569 CHMP4CQ96CF2 233 aa12.91□□□□□ -0.34
ZIC4-216ENST00000494569 NCOA5Q9HCD5 579 aaKnown RBP12.91□□□□□ -0.34
ZIC4-216ENST00000494569 FAM217BQ9NTX9 383 aaPredicted RBP12.91□□□□□ -0.34
ZIC4-216ENST00000494569 UTRNP46939 3433 aa12.91□□□□□ -0.34
ZIC4-216ENST00000494569 AKNAD1Q5T1N1 836 aa12.91□□□□□ -0.34
ZIC4-216ENST00000494569 ANGEL1Q9UNK9 670 aaKnown RBP12.91□□□□□ -0.34
ZIC4-216ENST00000494569 BRCA1P38398 1863 aaKnown RBP12.9□□□□□ -0.34
ZIC4-216ENST00000494569 XDHP47989 1333 aa12.9□□□□□ -0.34
ZIC4-216ENST00000494569 CYP7A1P22680 504 aa12.9□□□□□ -0.34
ZIC4-216ENST00000494569 NTRK3Q16288 839 aa12.9□□□□□ -0.34
ZIC4-216ENST00000494569 TTC6Q86TZ1 520 aa12.9□□□□□ -0.34
ZIC4-216ENST00000494569 ZSCAN16Q9H4T2 348 aaPredicted RBP12.9□□□□□ -0.34
ZIC4-216ENST00000494569 SENP2Q9HC62 589 aa12.9□□□□□ -0.34
ZIC4-216ENST00000494569 LRP2BPQ9P2M1 347 aa12.9□□□□□ -0.34
ZIC4-216ENST00000494569 SLC4A4Q9Y6R1 1079 aa12.9□□□□□ -0.34
ZIC4-216ENST00000494569 C10orf71Q711Q0 1435 aa12.9□□□□□ -0.34
ZIC4-216ENST00000494569 NASPP49321 788 aaPredicted RBP12.9□□□□□ -0.34
ZIC4-216ENST00000494569 DNAJC5GQ8N7S2 189 aa12.9□□□□□ -0.34
ZIC4-216ENST00000494569 CRAMP1Q96RY5 1269 aa12.9□□□□□ -0.34
ZIC4-216ENST00000494569 INCENPQ9NQS7 918 aa12.9□□□□□ -0.34
ZIC4-216ENST00000494569 ADAMTSL1Q8N6G6 1762 aa12.9□□□□□ -0.34
ZIC4-216ENST00000494569 VPS37CA5D8V6 355 aaPredicted RBP12.9□□□□□ -0.35
ZIC4-216ENST00000494569 MECOMQ03112 1051 aa12.9□□□□□ -0.35
ZIC4-216ENST00000494569 CTDSPL2Q05D32 466 aa12.9□□□□□ -0.35
ZIC4-216ENST00000494569 CNNM2Q9H8M5 875 aa12.9□□□□□ -0.35
ZIC4-216ENST00000494569 ZSWIM5Q9P217 1185 aa12.9□□□□□ -0.35
ZIC4-216ENST00000494569 MKRN1Q9UHC7 482 aaKnown RBP12.9□□□□□ -0.35
ZIC4-216ENST00000494569 IQSEC3Q9UPP2 1182 aaPredicted RBP12.9□□□□□ -0.35
ZIC4-216ENST00000494569 ARFGEF1Q9Y6D6 1849 aa12.89□□□□□ -0.35
ZIC4-216ENST00000494569 MAGEB6P1A0A0J9YX57 407 aa12.89□□□□□ -0.35
ZIC4-216ENST00000494569 KLF18A0A0U1RQI7 1052 aa12.89□□□□□ -0.35
ZIC4-216ENST00000494569 TOMM70O94826 608 aa12.89□□□□□ -0.35
ZIC4-216ENST00000494569 CCT2P78371 535 aaKnown RBP12.89□□□□□ -0.35
ZIC4-216ENST00000494569 NAPBQ9H115 298 aa12.89□□□□□ -0.35
ZIC4-216ENST00000494569 B4E1Z4 1266 aa12.89□□□□□ -0.35
ZIC4-216ENST00000494569 GPSM2P81274 684 aa12.89□□□□□ -0.35
ZIC4-216ENST00000494569 APOA5Q6Q788 366 aa12.89□□□□□ -0.35
ZIC4-216ENST00000494569 RALYLQ86SE5 291 aaKnown RBP12.89□□□□□ -0.35
ZIC4-216ENST00000494569 IL1R1P14778 569 aa12.88□□□□□ -0.35
ZIC4-216ENST00000494569 NCLP19338 710 aaKnown RBP12.88□□□□□ -0.35
ZIC4-216ENST00000494569 RCAN1P53805 252 aa12.88□□□□□ -0.35
ZIC4-216ENST00000494569 TGFB2P61812 414 aa12.88□□□□□ -0.35
ZIC4-216ENST00000494569 MIGA1Q8NAN2 632 aa12.88□□□□□ -0.35
ZIC4-216ENST00000494569 DYNLL1P63167 89 aaKnown RBP12.88□□□□□ -0.35
ZIC4-216ENST00000494569 PPARAQ07869 468 aa12.88□□□□□ -0.35
ZIC4-216ENST00000494569 KRT23Q9C075 422 aa12.88□□□□□ -0.35
ZIC4-216ENST00000494569 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.88□□□□□ -0.35
ZIC4-216ENST00000494569 SEC23AQ15436 765 aa12.88□□□□□ -0.35
ZIC4-216ENST00000494569 CSPP1Q1MSJ5 1256 aa12.88□□□□□ -0.35
ZIC4-216ENST00000494569 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
ZIC4-216ENST00000494569 KRT85P78386 507 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 ST5P78524 1137 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 FAM173BQ6P4H8 233 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 LEO1Q8WVC0 666 aaPredicted RBP12.87□□□□□ -0.35
ZIC4-216ENST00000494569 PGBD1Q96JS3 809 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 STK36Q9NRP7 1315 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 CDC27P30260 824 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 SBK1Q52WX2 424 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 ATL3Q6DD88 541 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 RBM46Q8TBY0 533 aaKnown RBP12.87□□□□□ -0.35
ZIC4-216ENST00000494569 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
ZIC4-216ENST00000494569 DDX11Q96FC9 970 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 RBM17Q96I25 401 aaKnown RBP12.87□□□□□ -0.35
ZIC4-216ENST00000494569 NACAP1Q9BZK3 213 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 GOLGA8BA8MQT2 603 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 SMIM22K7EJ46 135 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 BBOX1O75936 387 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 APPP05067 770 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 PCP11498 1178 aaKnown RBP12.87□□□□□ -0.35
ZIC4-216ENST00000494569 FOXD4L6Q3SYB3 417 aaPredicted RBP12.87□□□□□ -0.35
ZIC4-216ENST00000494569 CTR9Q6PD62 1173 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 FOXD4L3Q6VB84 417 aaPredicted RBP12.87□□□□□ -0.35
ZIC4-216ENST00000494569 RAI14Q9P0K7 980 aa12.87□□□□□ -0.35
ZIC4-216ENST00000494569 PRDX5P30044 214 aa12.86□□□□□ -0.35
ZIC4-216ENST00000494569 TRDNQ13061 729 aa12.86□□□□□ -0.35
ZIC4-216ENST00000494569 FERMT3Q86UX7 667 aa12.86□□□□□ -0.35
ZIC4-216ENST00000494569 SDR42E1Q8WUS8 393 aa12.86□□□□□ -0.35
ZIC4-216ENST00000494569 SCAND2PQ9GZW5 306 aaPredicted RBP12.86□□□□□ -0.35
ZIC4-216ENST00000494569 ATP2B4P23634 1241 aa12.86□□□□□ -0.35
ZIC4-216ENST00000494569 CCDC173Q0VFZ6 552 aa12.86□□□□□ -0.35
ZIC4-216ENST00000494569 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
ZIC4-216ENST00000494569 ABCF2Q9UG63 623 aa12.86□□□□□ -0.35
ZIC4-216ENST00000494569 RCOR1Q9UKL0 485 aa12.86□□□□□ -0.35
ZIC4-216ENST00000494569 SNED1Q8TER0 1413 aa12.86□□□□□ -0.35
ZIC4-216ENST00000494569 FIBPO43427 364 aa12.85□□□□□ -0.35
ZIC4-216ENST00000494569 DHX16O60231 1041 aaKnown RBP12.85□□□□□ -0.35
ZIC4-216ENST00000494569 RANBP6O60518 1105 aaKnown RBP12.85□□□□□ -0.35
ZIC4-216ENST00000494569 MFSD6Q6ZSS7 791 aa12.85□□□□□ -0.35
ZIC4-216ENST00000494569 TMC4Q7Z404 712 aa12.85□□□□□ -0.35
ZIC4-216ENST00000494569 NBPF11Q86T75 865 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms