RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 USP17L12C9JPN9 530 aa16.75■□□□□ 0.27
UBE3C-207ENST00000494532 USP17L21D6R901 530 aa16.75■□□□□ 0.27
UBE3C-207ENST00000494532 KRT32Q14532 448 aa16.75■□□□□ 0.27
UBE3C-207ENST00000494532 KIF4BQ2VIQ3 1234 aa16.75■□□□□ 0.27
UBE3C-207ENST00000494532 TBC1D10BQ4KMP7 808 aaPredicted RBP16.75■□□□□ 0.27
UBE3C-207ENST00000494532 CTR9Q6PD62 1173 aa16.75■□□□□ 0.27
UBE3C-207ENST00000494532 SAMD7Q7Z3H4 446 aa16.75■□□□□ 0.27
UBE3C-207ENST00000494532 ZNF70Q9UC06 446 aaPredicted RBP16.75■□□□□ 0.27
UBE3C-207ENST00000494532 MKRN1Q9UHC7 482 aaKnown RBP16.75■□□□□ 0.27
UBE3C-207ENST00000494532 SAP30BPQ9UHR5 308 aaKnown RBP16.75■□□□□ 0.27
UBE3C-207ENST00000494532 RBM19Q9Y4C8 960 aaKnown RBP16.75■□□□□ 0.27
UBE3C-207ENST00000494532 CLRN2A0PK11 232 aa16.74■□□□□ 0.27
UBE3C-207ENST00000494532 POLR3DP05423 398 aaPredicted RBP16.74■□□□□ 0.27
UBE3C-207ENST00000494532 CACNB3P54284 484 aa16.74■□□□□ 0.27
UBE3C-207ENST00000494532 PPARAQ07869 468 aa16.74■□□□□ 0.27
UBE3C-207ENST00000494532 NFIAQ12857 509 aa16.74■□□□□ 0.27
UBE3C-207ENST00000494532 TSGA10IPQ3SY00 556 aa16.74■□□□□ 0.27
UBE3C-207ENST00000494532 SPDYE2Q495Y8 402 aa16.74■□□□□ 0.27
UBE3C-207ENST00000494532 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
UBE3C-207ENST00000494532 IL17RAQ96F46 866 aa16.74■□□□□ 0.27
UBE3C-207ENST00000494532 JAKMIP1Q96N16 626 aaKnown RBP16.74■□□□□ 0.27
UBE3C-207ENST00000494532 KIF2CQ99661 725 aa16.74■□□□□ 0.27
UBE3C-207ENST00000494532 IDI2Q9BXS1 227 aa16.74■□□□□ 0.27
UBE3C-207ENST00000494532 DDX4Q9NQI0 724 aaKnown RBP16.74■□□□□ 0.27
UBE3C-207ENST00000494532 TAF6LQ9Y6J9 622 aa16.74■□□□□ 0.27
UBE3C-207ENST00000494532 CYP2D7A0A087X1C5 515 aa16.73■□□□□ 0.27
UBE3C-207ENST00000494532 GLTPD2A6NH11 291 aa16.73■□□□□ 0.27
UBE3C-207ENST00000494532 WNT10BO00744 389 aa16.73■□□□□ 0.27
UBE3C-207ENST00000494532 EGFRP00533 1210 aa16.73■□□□□ 0.27
UBE3C-207ENST00000494532 CYP2D6P10635 497 aa16.73■□□□□ 0.27
UBE3C-207ENST00000494532 EPS15P42566 896 aa16.73■□□□□ 0.27
UBE3C-207ENST00000494532 CTDSPL2Q05D32 466 aa16.73■□□□□ 0.27
UBE3C-207ENST00000494532 RABEP1Q15276 862 aa16.73■□□□□ 0.27
UBE3C-207ENST00000494532 NBPF9Q3BBW0 867 aa16.73■□□□□ 0.27
UBE3C-207ENST00000494532 OSBPL5Q9H0X9 879 aaPredicted RBP16.73■□□□□ 0.27
UBE3C-207ENST00000494532 VEZTQ9HBM0 779 aa16.73■□□□□ 0.27
UBE3C-207ENST00000494532 FAM198AQ9UFP1 575 aa16.73■□□□□ 0.27
UBE3C-207ENST00000494532 E7EWF7 191 aa16.72■□□□□ 0.27
UBE3C-207ENST00000494532 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
UBE3C-207ENST00000494532 SLC3A2P08195 630 aaKnown RBP16.72■□□□□ 0.27
UBE3C-207ENST00000494532 PSMA5P28066 241 aa16.72■□□□□ 0.27
UBE3C-207ENST00000494532 SLC4A8Q2Y0W8 1093 aa16.72■□□□□ 0.27
UBE3C-207ENST00000494532 ADCK5Q3MIX3 580 aa16.72■□□□□ 0.27
UBE3C-207ENST00000494532 STOX1Q6ZVD7 989 aa16.72■□□□□ 0.27
UBE3C-207ENST00000494532 TBC1D10CQ8IV04 446 aa16.72■□□□□ 0.27
UBE3C-207ENST00000494532 L3MBTL3Q96JM7 780 aaPredicted RBP16.72■□□□□ 0.27
UBE3C-207ENST00000494532 NBPF3Q9H094 633 aa16.72■□□□□ 0.27
UBE3C-207ENST00000494532 ANAPC4Q9UJX5 808 aa16.72■□□□□ 0.27
UBE3C-207ENST00000494532 TCP10L2B9ZVM9 353 aa16.71■□□□□ 0.27
UBE3C-207ENST00000494532 ENTPD3O75355 529 aa16.71■□□□□ 0.27
UBE3C-207ENST00000494532 CASTP20810 708 aaKnown RBP16.71■□□□□ 0.27
UBE3C-207ENST00000494532 ANP32AP39687 249 aaKnown RBP16.71■□□□□ 0.27
UBE3C-207ENST00000494532 TCP10Q12799 353 aa16.71■□□□□ 0.27
UBE3C-207ENST00000494532 AKNAD1Q5T1N1 836 aa16.71■□□□□ 0.27
UBE3C-207ENST00000494532 C12orf60Q5U649 245 aa16.71■□□□□ 0.27
UBE3C-207ENST00000494532 STK11IPQ8N1F8 1099 aa16.71■□□□□ 0.27
UBE3C-207ENST00000494532 TRPM4Q8TD43 1214 aa16.71■□□□□ 0.27
UBE3C-207ENST00000494532 TM6SF1Q9BZW5 370 aa16.71■□□□□ 0.27
UBE3C-207ENST00000494532 RNF41Q9H4P4 317 aaPredicted RBP16.71■□□□□ 0.27
UBE3C-207ENST00000494532 ADARB2Q9NS39 739 aaKnown RBP16.71■□□□□ 0.27
UBE3C-207ENST00000494532 TRDNQ13061 729 aa16.7■□□□□ 0.26
UBE3C-207ENST00000494532 FKBP1CQ5VVH2 108 aa16.7■□□□□ 0.26
UBE3C-207ENST00000494532 MFSD6Q6ZSS7 791 aa16.7■□□□□ 0.26
UBE3C-207ENST00000494532 TTC6Q86TZ1 520 aa16.7■□□□□ 0.26
UBE3C-207ENST00000494532 STAG1Q8WVM7 1258 aa16.7■□□□□ 0.26
UBE3C-207ENST00000494532 NEK1Q96PY6 1258 aa16.7■□□□□ 0.26
UBE3C-207ENST00000494532 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
UBE3C-207ENST00000494532 HACL1Q9UJ83 578 aa16.7■□□□□ 0.26
UBE3C-207ENST00000494532 SRCAPQ6ZRS2 3230 aa16.7■□□□□ 0.26
UBE3C-207ENST00000494532 COL2A1P02458 1487 aaPredicted RBP16.69■□□□□ 0.26
UBE3C-207ENST00000494532 ROBO3Q96MS0 1386 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 SCN4AP35499 1836 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 SMIM22K7EJ46 135 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 HLA-DOAP06340 250 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 TNNI2P48788 182 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 PLCD1P51178 756 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 EVX2Q03828 476 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 BLOC1S2Q6QNY1 142 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 RALYLQ86SE5 291 aaKnown RBP16.69■□□□□ 0.26
UBE3C-207ENST00000494532 ZSCAN29Q8IWY8 852 aaPredicted RBP16.69■□□□□ 0.26
UBE3C-207ENST00000494532 ZFPM1Q8IX07 1006 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 NCOA7Q8NI08 942 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 DHX36Q9H2U1 1008 aaKnown RBP16.69■□□□□ 0.26
UBE3C-207ENST00000494532 CNNM2Q9H8M5 875 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 ZSWIM6Q9HCJ5 1215 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 TOMM22Q9NS69 142 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 CYP46A1Q9Y6A2 500 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 WDR90Q96KV7 1748 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 NEDD4P46934 1319 aa16.69■□□□□ 0.26
UBE3C-207ENST00000494532 HMGB1P09429 215 aaKnown RBP16.68■□□□□ 0.26
UBE3C-207ENST00000494532 PCP11498 1178 aaKnown RBP16.68■□□□□ 0.26
UBE3C-207ENST00000494532 CPA1P15085 419 aa16.68■□□□□ 0.26
UBE3C-207ENST00000494532 NEK4P51957 841 aa16.68■□□□□ 0.26
UBE3C-207ENST00000494532 TNFAIP1Q13829 316 aa16.68■□□□□ 0.26
UBE3C-207ENST00000494532 RRP12Q5JTH9 1297 aaKnown RBP16.68■□□□□ 0.26
UBE3C-207ENST00000494532 FAM151AQ8WW52 585 aa16.68■□□□□ 0.26
UBE3C-207ENST00000494532 KRT23Q9C075 422 aa16.68■□□□□ 0.26
UBE3C-207ENST00000494532 ASTN2O75129 1339 aaPredicted RBP16.68■□□□□ 0.26
UBE3C-207ENST00000494532 CNTNAP1P78357 1384 aa16.67■□□□□ 0.26
UBE3C-207ENST00000494532 IQCA1LA6NCM1 817 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms