RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 BCAR3O75815 825 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 IGKV5-2P06315 115 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 BMS1Q14692 1282 aaKnown RBP7.48□□□□□ -1.21
NXF3-206ENST00000494300 RIC1Q4ADV7 1423 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 TJAP1Q5JTD0 557 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 BEND3Q5T5X7 828 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 PRPF40BQ6NWY9 871 aaKnown RBP7.48□□□□□ -1.21
NXF3-206ENST00000494300 ATF7IPQ6VMQ6 1270 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 C11orf96Q7Z7L8 435 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 CLP1Q92989 425 aaKnown RBP7.48□□□□□ -1.21
NXF3-206ENST00000494300 CRAMP1Q96RY5 1269 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 CDC5LQ99459 802 aaKnown RBP7.48□□□□□ -1.21
NXF3-206ENST00000494300 TRIM34Q9BYJ4 488 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 TGIF2Q9GZN2 237 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 IL21Q9HBE4 155 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 GNL3LQ9NVN8 582 aaKnown RBP7.48□□□□□ -1.21
NXF3-206ENST00000494300 CHMP3Q9Y3E7 222 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 ARFGEF2Q9Y6D5 1785 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 CDHR2Q9BYE9 1310 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 CACNA1FO60840 1977 aa7.48□□□□□ -1.21
NXF3-206ENST00000494300 NRXN2Q9P2S2 1712 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 ANKRD36CQ5JPF3 1778 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 KLRG2A4D1S0 409 aaPredicted RBP7.47□□□□□ -1.21
NXF3-206ENST00000494300 PPEF1O14829 653 aaPredicted RBP7.47□□□□□ -1.21
NXF3-206ENST00000494300 HOXA2O43364 376 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 C21orf2O43822 256 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 BBOX1O75936 387 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 UBTFL1P0CB47 393 aaPredicted RBP7.47□□□□□ -1.21
NXF3-206ENST00000494300 SOX11P35716 441 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 CTSWP56202 376 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 QPCTQ16769 361 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 CRY2Q49AN0 593 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 CCDC93Q567U6 631 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 RNF187Q5TA31 235 aaPredicted RBP7.47□□□□□ -1.21
NXF3-206ENST00000494300 TMC4Q7Z404 712 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 CCAR1Q8IX12 1150 aaKnown RBP7.47□□□□□ -1.21
NXF3-206ENST00000494300 RTKN2Q8IZC4 609 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 JARID2Q92833 1246 aaPredicted RBP7.47□□□□□ -1.21
NXF3-206ENST00000494300 DDX56Q9NY93 547 aaKnown RBP7.47□□□□□ -1.21
NXF3-206ENST00000494300 PRR12Q9ULL5 1215 aa7.47□□□□□ -1.21
NXF3-206ENST00000494300 AFDNP55196 1824 aaKnown RBP7.47□□□□□ -1.21
NXF3-206ENST00000494300 H7C1W4 665 aa7.46□□□□□ -1.22
NXF3-206ENST00000494300 GNAI3P08754 354 aa7.46□□□□□ -1.22
NXF3-206ENST00000494300 YBX3P16989 372 aaKnown RBP eCLIP7.46□□□□□ -1.22
NXF3-206ENST00000494300 KCNA3P22001 575 aa7.46□□□□□ -1.22
NXF3-206ENST00000494300 HOXA10P31260 410 aaPredicted RBP7.46□□□□□ -1.22
NXF3-206ENST00000494300 IGHMBP2P38935 993 aaKnown RBP7.46□□□□□ -1.22
NXF3-206ENST00000494300 GRAPQ13588 217 aa7.46□□□□□ -1.22
NXF3-206ENST00000494300 SF3B3Q15393 1217 aaKnown RBP7.46□□□□□ -1.22
NXF3-206ENST00000494300 IFFO2Q5TF58 517 aa7.46□□□□□ -1.22
NXF3-206ENST00000494300 ANKRD18AQ8IVF6 992 aa7.46□□□□□ -1.22
NXF3-206ENST00000494300 ITPRIPQ8IWB1 547 aa7.46□□□□□ -1.22
NXF3-206ENST00000494300 DZIP1LQ8IYY4 767 aaKnown RBP7.46□□□□□ -1.22
NXF3-206ENST00000494300 SYNE4Q8N205 404 aa7.46□□□□□ -1.22
NXF3-206ENST00000494300 GRAPLQ8TC17 118 aaPredicted RBP7.46□□□□□ -1.22
NXF3-206ENST00000494300 CCDC85AQ96PX6 553 aaPredicted RBP7.46□□□□□ -1.22
NXF3-206ENST00000494300 CHMP4BQ9H444 224 aaKnown RBP7.46□□□□□ -1.22
NXF3-206ENST00000494300 KIF13BQ9NQT8 1826 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 ANKRD18BA2A2Z9 1011 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 TRIM27P14373 513 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 SCNN1AP37088 669 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 GCGRP47871 477 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 IFIT5Q13325 482 aaKnown RBP7.45□□□□□ -1.22
NXF3-206ENST00000494300 ECM1Q16610 540 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 CCDC57Q2TAC2 916 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 BLOC1S3Q6QNY0 202 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 SUPT20HQ8NEM7 779 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 SPIRE2Q8WWL2 714 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 ZNF516Q92618 1163 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 RPS6KC1Q96S38 1066 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 MPHOSPH8Q99549 860 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 OSBPL2Q9H1P3 480 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 TAOK3Q9H2K8 898 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 CAPN10Q9HC96 672 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 MRPL42Q9Y6G3 142 aaKnown RBP7.45□□□□□ -1.22
NXF3-206ENST00000494300 N4BP2Q86UW6 1770 aaPredicted RBP7.45□□□□□ -1.22
NXF3-206ENST00000494300 ABCC4O15439 1325 aa7.45□□□□□ -1.22
NXF3-206ENST00000494300 CD46P15529 392 aa7.44□□□□□ -1.22
NXF3-206ENST00000494300 GYS2P54840 703 aa7.44□□□□□ -1.22
NXF3-206ENST00000494300 RPS8P62241 208 aaKnown RBP7.44□□□□□ -1.22
NXF3-206ENST00000494300 OS9Q13438 667 aaPredicted RBP7.44□□□□□ -1.22
NXF3-206ENST00000494300 INTS3Q68E01 1043 aaKnown RBP7.44□□□□□ -1.22
NXF3-206ENST00000494300 PPP1R18Q6NYC8 613 aa7.44□□□□□ -1.22
NXF3-206ENST00000494300 RSBN1LQ6PCB5 846 aaPredicted RBP7.44□□□□□ -1.22
NXF3-206ENST00000494300 DPP8Q6V1X1 898 aaPredicted RBP7.44□□□□□ -1.22
NXF3-206ENST00000494300 SENP7Q9BQF6 1050 aa7.44□□□□□ -1.22
NXF3-206ENST00000494300 PLA2G12BQ9BX93 195 aa7.44□□□□□ -1.22
NXF3-206ENST00000494300 BSDC1Q9NW68 430 aaPredicted RBP7.44□□□□□ -1.22
NXF3-206ENST00000494300 RNF181Q9P0P0 153 aa7.44□□□□□ -1.22
NXF3-206ENST00000494300 ANKIB1Q9P2G1 1089 aa7.44□□□□□ -1.22
NXF3-206ENST00000494300 G3BP2Q9UN86 482 aaKnown RBP7.44□□□□□ -1.22
NXF3-206ENST00000494300 ATP6V0A2Q9Y487 856 aa7.44□□□□□ -1.22
NXF3-206ENST00000494300 NBPF7P0C2Y1 421 aaPredicted RBP7.43□□□□□ -1.22
NXF3-206ENST00000494300 LMNB1P20700 586 aa7.43□□□□□ -1.22
NXF3-206ENST00000494300 ITGA6P23229 1130 aa7.43□□□□□ -1.22
NXF3-206ENST00000494300 BDNFP23560 247 aa7.43□□□□□ -1.22
NXF3-206ENST00000494300 YY1P25490 414 aa7.43□□□□□ -1.22
NXF3-206ENST00000494300 KCNJ4P48050 445 aa7.43□□□□□ -1.22
NXF3-206ENST00000494300 FUT2Q10981 343 aa7.43□□□□□ -1.22
NXF3-206ENST00000494300 BIRC2Q13490 618 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms