RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 TCF12Q99081 682 aa4.69□□□□□ -1.66
PTPN12-212ENST00000494248 PARD6AQ9NPB6 346 aa4.69□□□□□ -1.66
PTPN12-212ENST00000494248 SMG5Q9UPR3 1016 aaKnown RBP4.69□□□□□ -1.66
PTPN12-212ENST00000494248 SNX11Q9Y5W9 270 aa4.69□□□□□ -1.66
PTPN12-212ENST00000494248 PHACTR2O75167 634 aa4.68□□□□□ -1.66
PTPN12-212ENST00000494248 RPLP1P05386 114 aaKnown RBP4.68□□□□□ -1.66
PTPN12-212ENST00000494248 TMEM253P0C7T8 217 aa4.68□□□□□ -1.66
PTPN12-212ENST00000494248 NKPD1Q17RQ9 610 aa4.68□□□□□ -1.66
PTPN12-212ENST00000494248 CIAPIN1Q6FI81 312 aa4.68□□□□□ -1.66
PTPN12-212ENST00000494248 PRRT2Q7Z6L0 340 aaPredicted RBP4.68□□□□□ -1.66
PTPN12-212ENST00000494248 PROSER2Q86WR7 435 aaPredicted RBP4.68□□□□□ -1.66
PTPN12-212ENST00000494248 CCNJLQ8IV13 435 aa4.68□□□□□ -1.66
PTPN12-212ENST00000494248 SMYD4Q8IYR2 804 aaPredicted RBP4.68□□□□□ -1.66
PTPN12-212ENST00000494248 CORO1BQ9BR76 489 aa4.68□□□□□ -1.66
PTPN12-212ENST00000494248 PCDHGC5Q9Y5F6 944 aa4.68□□□□□ -1.66
PTPN12-212ENST00000494248 SYNGAP1Q96PV0 1343 aa4.68□□□□□ -1.66
PTPN12-212ENST00000494248 POLR3DP05423 398 aaPredicted RBP4.67□□□□□ -1.66
PTPN12-212ENST00000494248 PDE3AQ14432 1141 aa4.67□□□□□ -1.66
PTPN12-212ENST00000494248 TTLL4Q14679 1199 aa4.67□□□□□ -1.66
PTPN12-212ENST00000494248 HP1BP3Q5SSJ5 553 aaPredicted RBP4.67□□□□□ -1.66
PTPN12-212ENST00000494248 ARHGAP27Q6ZUM4 889 aa4.67□□□□□ -1.66
PTPN12-212ENST00000494248 CYFIP1Q7L576 1253 aa4.67□□□□□ -1.66
PTPN12-212ENST00000494248 ASB11Q8WXH4 323 aa4.67□□□□□ -1.66
PTPN12-212ENST00000494248 CCDC86Q9H6F5 360 aaKnown RBP4.67□□□□□ -1.66
PTPN12-212ENST00000494248 NUAK1O60285 661 aa4.66□□□□□ -1.66
PTPN12-212ENST00000494248 ZNF862O60290 1169 aa4.66□□□□□ -1.66
PTPN12-212ENST00000494248 EIF4EBP3O60516 100 aaPredicted RBP4.66□□□□□ -1.66
PTPN12-212ENST00000494248 B3GALT4O96024 378 aa4.66□□□□□ -1.66
PTPN12-212ENST00000494248 NEFMP07197 916 aa4.66□□□□□ -1.66
PTPN12-212ENST00000494248 MZF1P28698 734 aaPredicted RBP4.66□□□□□ -1.66
PTPN12-212ENST00000494248 LINC00310P59036 64 aa4.66□□□□□ -1.66
PTPN12-212ENST00000494248 TOP6BLQ8N6T0 577 aa4.66□□□□□ -1.66
PTPN12-212ENST00000494248 IRF2BPLQ9H1B7 796 aa4.66□□□□□ -1.66
PTPN12-212ENST00000494248 POLIQ9UNA4 740 aa4.66□□□□□ -1.66
PTPN12-212ENST00000494248 A0A1W2PP55 124 aa4.65□□□□□ -1.67
PTPN12-212ENST00000494248 RBAK-RBAKDNI3L0D1 243 aa4.65□□□□□ -1.67
PTPN12-212ENST00000494248 HCLS1P14317 486 aaPredicted RBP4.65□□□□□ -1.67
PTPN12-212ENST00000494248 GLDCP23378 1020 aa4.65□□□□□ -1.67
PTPN12-212ENST00000494248 ZC3H12CQ9C0D7 883 aaKnown RBP4.65□□□□□ -1.67
PTPN12-212ENST00000494248 PIDD1Q9HB75 910 aa4.65□□□□□ -1.67
PTPN12-212ENST00000494248 TCAF2A6NFQ2 919 aa4.64□□□□□ -1.67
PTPN12-212ENST00000494248 ADRB1P08588 477 aa4.64□□□□□ -1.67
PTPN12-212ENST00000494248 BMP7P18075 431 aa4.64□□□□□ -1.67
PTPN12-212ENST00000494248 EIF1AXP47813 144 aaKnown RBP4.64□□□□□ -1.67
PTPN12-212ENST00000494248 ELOAQ14241 798 aaKnown RBP4.64□□□□□ -1.67
PTPN12-212ENST00000494248 SKOR2Q2VWA4 1001 aaPredicted RBP4.64□□□□□ -1.67
PTPN12-212ENST00000494248 SNX29Q8TEQ0 813 aa4.64□□□□□ -1.67
PTPN12-212ENST00000494248 CARS2Q9HA77 564 aaKnown RBP4.64□□□□□ -1.67
PTPN12-212ENST00000494248 ZFYVE1Q9HBF4 777 aa4.64□□□□□ -1.67
PTPN12-212ENST00000494248 ZFYVE28Q9HCC9 887 aa4.64□□□□□ -1.67
PTPN12-212ENST00000494248 DCP1AQ9NPI6 582 aaPredicted RBP4.64□□□□□ -1.67
PTPN12-212ENST00000494248 AMOTL2Q9Y2J4 779 aa4.64□□□□□ -1.67
PTPN12-212ENST00000494248 AKAP8O43823 692 aaKnown RBP4.63□□□□□ -1.67
PTPN12-212ENST00000494248 RNGTTO60942 597 aaKnown RBP4.63□□□□□ -1.67
PTPN12-212ENST00000494248 PCSK2P16519 638 aa4.63□□□□□ -1.67
PTPN12-212ENST00000494248 GDNFP39905 211 aa4.63□□□□□ -1.67
PTPN12-212ENST00000494248 ID3Q02535 119 aa4.63□□□□□ -1.67
PTPN12-212ENST00000494248 NOM1Q5C9Z4 860 aaKnown RBP4.63□□□□□ -1.67
PTPN12-212ENST00000494248 TMEM164Q5U3C3 297 aa4.63□□□□□ -1.67
PTPN12-212ENST00000494248 ISL2Q96A47 359 aa4.63□□□□□ -1.67
PTPN12-212ENST00000494248 KCNC2Q96PR1 638 aa4.63□□□□□ -1.67
PTPN12-212ENST00000494248 EPB41L4BQ9H329 900 aa4.63□□□□□ -1.67
PTPN12-212ENST00000494248 ATXN3LQ9H3M9 355 aa4.63□□□□□ -1.67
PTPN12-212ENST00000494248 ZNF576Q9H609 170 aa4.63□□□□□ -1.67
PTPN12-212ENST00000494248 MPSTP25325 297 aa4.62□□□□□ -1.67
PTPN12-212ENST00000494248 KIF4BQ2VIQ3 1234 aa4.62□□□□□ -1.67
PTPN12-212ENST00000494248 HELQQ8TDG4 1101 aa4.62□□□□□ -1.67
PTPN12-212ENST00000494248 ZCCHC4Q9H5U6 513 aa4.62□□□□□ -1.67
PTPN12-212ENST00000494248 LIN7BQ9HAP6 207 aa4.62□□□□□ -1.67
PTPN12-212ENST00000494248 PCOLCE2Q9UKZ9 415 aa4.62□□□□□ -1.67
PTPN12-212ENST00000494248 ADAMTS20P59510 1910 aa4.62□□□□□ -1.67
PTPN12-212ENST00000494248 IGF2BP3O00425 579 aaKnown RBP eCLIP4.61□□□□□ -1.67
PTPN12-212ENST00000494248 SRPK2P78362 688 aaKnown RBP4.61□□□□□ -1.67
PTPN12-212ENST00000494248 ZXDCQ2QGD7 858 aaPredicted RBP4.61□□□□□ -1.67
PTPN12-212ENST00000494248 KCNN1Q92952 543 aa4.61□□□□□ -1.67
PTPN12-212ENST00000494248 CLP1Q92989 425 aaKnown RBP4.61□□□□□ -1.67
PTPN12-212ENST00000494248 ATP13A1Q9HD20 1204 aa4.61□□□□□ -1.67
PTPN12-212ENST00000494248 SEMA3GQ9NS98 782 aa4.61□□□□□ -1.67
PTPN12-212ENST00000494248 UBE3DQ7Z6J8 389 aa4.6□□□□□ -1.67
PTPN12-212ENST00000494248 TTC16Q8NEE8 873 aa4.6□□□□□ -1.67
PTPN12-212ENST00000494248 CNTNAP4Q9C0A0 1308 aa4.6□□□□□ -1.67
PTPN12-212ENST00000494248 TRIM13O60858 407 aa4.59□□□□□ -1.67
PTPN12-212ENST00000494248 EOMESO95936 686 aa4.59□□□□□ -1.67
PTPN12-212ENST00000494248 SLFN14P0C7P3 912 aa4.59□□□□□ -1.67
PTPN12-212ENST00000494248 ITPKAP23677 461 aa4.59□□□□□ -1.67
PTPN12-212ENST00000494248 ZNF157P51786 506 aaPredicted RBP4.59□□□□□ -1.67
PTPN12-212ENST00000494248 ERVFC1P60507 584 aa4.59□□□□□ -1.67
PTPN12-212ENST00000494248 FAAP100Q0VG06 881 aa4.59□□□□□ -1.67
PTPN12-212ENST00000494248 AP3B2Q13367 1082 aa4.59□□□□□ -1.67
PTPN12-212ENST00000494248 MTMR3Q13615 1198 aa4.59□□□□□ -1.67
PTPN12-212ENST00000494248 NFIXQ14938 502 aa4.59□□□□□ -1.67
PTPN12-212ENST00000494248 GALNT12Q8IXK2 581 aa4.59□□□□□ -1.67
PTPN12-212ENST00000494248 MARCH10Q8NA82 808 aaPredicted RBP4.59□□□□□ -1.67
PTPN12-212ENST00000494248 PRR33A8MZF0 331 aa4.58□□□□□ -1.68
PTPN12-212ENST00000494248 CLCN7P51798 805 aa4.58□□□□□ -1.68
PTPN12-212ENST00000494248 USPL1Q5W0Q7 1092 aa4.58□□□□□ -1.68
PTPN12-212ENST00000494248 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.58□□□□□ -1.68
PTPN12-212ENST00000494248 HSPA12BQ96MM6 686 aa4.58□□□□□ -1.68
PTPN12-212ENST00000494248 RTEL1Q9NZ71 1219 aa4.58□□□□□ -1.68
PTPN12-212ENST00000494248 FZD6O60353 706 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms