RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 ELOA2Q8IYF1 753 aaPredicted RBP11.17□□□□□ -0.62
NPHP3-209ENST00000493732 MYRIPQ8NFW9 859 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 ACSBG1Q96GR2 724 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 EPB41L4AQ9HCS5 686 aaPredicted RBP11.17□□□□□ -0.62
NPHP3-209ENST00000493732 HOOK1Q9UJC3 728 aaKnown RBP11.17□□□□□ -0.62
NPHP3-209ENST00000493732 DENND2AQ9ULE3 1009 aa11.17□□□□□ -0.62
NPHP3-209ENST00000493732 SLIT2O94813 1529 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 A0A1B0GVL5 298 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 FAM177BA6PVY3 158 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 ZBTB22O15209 634 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 MYO1BO43795 1136 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 ZNF202O95125 648 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 XBP1P17861 261 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 BCAMP50895 628 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 NDUFA8P51970 172 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 SLC10A5Q5PT55 438 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 OTUD7BQ6GQQ9 843 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 ESR2Q92731 530 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 UBAC1Q9BSL1 405 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 PDCL3Q9H2J4 239 aa11.16□□□□□ -0.62
NPHP3-209ENST00000493732 PDS5AQ29RF7 1337 aaKnown RBP11.16□□□□□ -0.62
NPHP3-209ENST00000493732 MAGEB6P1A0A0J9YX57 407 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 CUTAO60888 179 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 DEXIO95424 95 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 CYP7A1P22680 504 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 PTGS1P23219 599 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 CDC27P30260 824 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 GSDMDP57764 484 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 NLRP12P59046 1061 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 RTN1Q16799 776 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 FOXP1Q9H334 677 aaPredicted RBP11.15□□□□□ -0.62
NPHP3-209ENST00000493732 KCNF1Q9H3M0 494 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 IMPACTQ9P2X3 320 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 CEP131Q9UPN4 1083 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 CNTNAP4Q9C0A0 1308 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 KIF28PB7ZC32 967 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 PPFIA3O75145 1194 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 GTF2E1P29083 439 aaPredicted RBP11.15□□□□□ -0.62
NPHP3-209ENST00000493732 GTF2F1P35269 517 aaKnown RBP eCLIP11.15□□□□□ -0.62
NPHP3-209ENST00000493732 SYKP43405 635 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 CTDSPL2Q05D32 466 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 RILPL1Q5EBL4 403 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 AXDND1Q5T1B0 1012 aaPredicted RBP11.15□□□□□ -0.62
NPHP3-209ENST00000493732 RC3H1Q5TC82 1133 aaKnown RBP11.15□□□□□ -0.62
NPHP3-209ENST00000493732 C11orf57Q6ZUT1 292 aaPredicted RBP11.15□□□□□ -0.62
NPHP3-209ENST00000493732 LCORLQ8N3X6 602 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 CCDC34Q96HJ3 373 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.15□□□□□ -0.62
NPHP3-209ENST00000493732 BRIP1Q9BX63 1249 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 ANKRD2Q9GZV1 360 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 TOMM22Q9NS69 142 aa11.15□□□□□ -0.62
NPHP3-209ENST00000493732 BCORQ6W2J9 1755 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 IKBKBO14920 756 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 NRDCO43847 1150 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 CALM1P0DP23 149 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 CALM2P0DP24 149 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 CALM3P0DP25 149 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 PFKFB1P16118 471 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 PPARAQ07869 468 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 NOSTRINQ8IVI9 506 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 DHX40Q8IX18 779 aaKnown RBP11.14□□□□□ -0.63
NPHP3-209ENST00000493732 MPNDQ8N594 471 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 SLC26A6Q9BXS9 759 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 FAM217BQ9NTX9 383 aaPredicted RBP11.14□□□□□ -0.63
NPHP3-209ENST00000493732 RAI14Q9P0K7 980 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 MORC2Q9Y6X9 1032 aaPredicted RBP11.14□□□□□ -0.63
NPHP3-209ENST00000493732 CHD4Q14839 1912 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 MYO5AQ9Y4I1 1855 aaKnown RBP11.14□□□□□ -0.63
NPHP3-209ENST00000493732 COL5A3P25940 1745 aaPredicted RBP11.14□□□□□ -0.63
NPHP3-209ENST00000493732 BCL9LQ86UU0 1499 aa11.14□□□□□ -0.63
NPHP3-209ENST00000493732 MMP1P03956 469 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 AKAP17AQ02040 695 aaKnown RBP11.13□□□□□ -0.63
NPHP3-209ENST00000493732 GLIPR1L2Q4G1C9 344 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 RAB11FIP4Q86YS3 637 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 FANCBQ8NB91 859 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 PHKBQ93100 1093 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 HPSEQ9Y251 543 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 RANBP6O60518 1105 aaKnown RBP11.13□□□□□ -0.63
NPHP3-209ENST00000493732 PTPAQ15257 358 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 RRP12Q5JTH9 1297 aaKnown RBP11.13□□□□□ -0.63
NPHP3-209ENST00000493732 RESP18Q5W5W9 173 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 IQCA1Q86XH1 822 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 CRACR2BQ8N4Y2 399 aaPredicted RBP11.13□□□□□ -0.63
NPHP3-209ENST00000493732 KRI1Q8N9T8 703 aaKnown RBP11.13□□□□□ -0.63
NPHP3-209ENST00000493732 UBE2Q2Q8WVN8 375 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 MAP3K14Q99558 947 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 RNF26Q9BY78 433 aaPredicted RBP11.13□□□□□ -0.63
NPHP3-209ENST00000493732 RBM28Q9NW13 759 aaKnown RBP11.13□□□□□ -0.63
NPHP3-209ENST00000493732 FAM13BQ9NYF5 915 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 ABCF2Q9UG63 623 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 PYCARDQ9ULZ3 195 aa11.13□□□□□ -0.63
NPHP3-209ENST00000493732 MYH14Q7Z406 1995 aaKnown RBP11.12□□□□□ -0.63
NPHP3-209ENST00000493732 TOM1O60784 492 aa11.12□□□□□ -0.63
NPHP3-209ENST00000493732 BMP15O95972 392 aa11.12□□□□□ -0.63
NPHP3-209ENST00000493732 ERFEQ4G0M1 354 aa11.12□□□□□ -0.63
NPHP3-209ENST00000493732 KANK3Q6NY19 840 aa11.12□□□□□ -0.63
NPHP3-209ENST00000493732 LRRC8AQ8IWT6 810 aa11.12□□□□□ -0.63
NPHP3-209ENST00000493732 ZNF654Q8IZM8 581 aa11.12□□□□□ -0.63
NPHP3-209ENST00000493732 AOPEPQ8N6M6 819 aa11.12□□□□□ -0.63
NPHP3-209ENST00000493732 ZNF579Q8NAF0 562 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms