RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 TDO2P48775 406 aa15.03■□□□□ -0
VPS52-220ENST00000493674 MMP14P50281 582 aa15.03■□□□□ -0
VPS52-220ENST00000493674 CTR9Q6PD62 1173 aa15.03■□□□□ -0
VPS52-220ENST00000493674 MB21D2Q8IYB1 491 aaPredicted RBP15.03■□□□□ -0
VPS52-220ENST00000493674 MTMR14Q8NCE2 650 aa15.03■□□□□ -0
VPS52-220ENST00000493674 ARPP21Q9UBL0 812 aaPredicted RBP15.03■□□□□ -0
VPS52-220ENST00000493674 CYP46A1Q9Y6A2 500 aa15.03■□□□□ -0
VPS52-220ENST00000493674 FLT1P17948 1338 aa15.02■□□□□ -0
VPS52-220ENST00000493674 NPM3O75607 178 aaKnown RBP15.02■□□□□ -0
VPS52-220ENST00000493674 WDHD1O75717 1129 aaPredicted RBP15.02■□□□□ -0
VPS52-220ENST00000493674 HMGB1P09429 215 aaKnown RBP15.02■□□□□ -0
VPS52-220ENST00000493674 CPA1P15085 419 aa15.02■□□□□ -0
VPS52-220ENST00000493674 RPS12P25398 132 aaKnown RBP15.02■□□□□ -0
VPS52-220ENST00000493674 MCM2P49736 904 aa15.02■□□□□ -0
VPS52-220ENST00000493674 EXOSC10Q01780 885 aaKnown RBP15.02■□□□□ -0
VPS52-220ENST00000493674 PPARAQ07869 468 aa15.02■□□□□ -0
VPS52-220ENST00000493674 TNIP1Q15025 636 aa15.02■□□□□ -0
VPS52-220ENST00000493674 CDC42EP5Q6NZY7 148 aa15.02■□□□□ -0
VPS52-220ENST00000493674 BLOC1S2Q6QNY1 142 aa15.02■□□□□ -0
VPS52-220ENST00000493674 HSCBQ8IWL3 235 aa15.02■□□□□ -0
VPS52-220ENST00000493674 TEX11Q8IYF3 940 aa15.02■□□□□ -0
VPS52-220ENST00000493674 FBXL16Q8N461 479 aa15.02■□□□□ -0
VPS52-220ENST00000493674 STAG1Q8WVM7 1258 aa15.02■□□□□ -0
VPS52-220ENST00000493674 ZBED3Q96IU2 234 aaPredicted RBP15.02■□□□□ -0
VPS52-220ENST00000493674 AGXT2Q9BYV1 514 aa15.02■□□□□ -0
VPS52-220ENST00000493674 WDR90Q96KV7 1748 aa15.01□□□□□ -0.01
VPS52-220ENST00000493674 NEDD4P46934 1319 aa15.01□□□□□ -0.01
VPS52-220ENST00000493674 ZNF541Q9H0D2 1346 aa15.01□□□□□ -0.01
VPS52-220ENST00000493674 K7ELQ4 463 aaPredicted RBP15.01□□□□□ -0.01
VPS52-220ENST00000493674 PCP11498 1178 aaKnown RBP15.01□□□□□ -0.01
VPS52-220ENST00000493674 ZNF280AP59817 542 aaPredicted RBP15.01□□□□□ -0.01
VPS52-220ENST00000493674 AKNAD1Q5T1N1 836 aa15.01□□□□□ -0.01
VPS52-220ENST00000493674 C12orf60Q5U649 245 aa15.01□□□□□ -0.01
VPS52-220ENST00000493674 C9orf131Q5VYM1 1079 aa15.01□□□□□ -0.01
VPS52-220ENST00000493674 RNF181Q9P0P0 153 aa15.01□□□□□ -0.01
VPS52-220ENST00000493674 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.01□□□□□ -0.01
VPS52-220ENST00000493674 PCDHAC2Q9Y5I4 1007 aa15.01□□□□□ -0.01
VPS52-220ENST00000493674 USP17L12C9JPN9 530 aa15□□□□□ -0.01
VPS52-220ENST00000493674 USP17L21D6R901 530 aa15□□□□□ -0.01
VPS52-220ENST00000493674 SMIM22K7EJ46 135 aa15□□□□□ -0.01
VPS52-220ENST00000493674 USP5P45974 858 aa15□□□□□ -0.01
VPS52-220ENST00000493674 AK2P54819 239 aa15□□□□□ -0.01
VPS52-220ENST00000493674 ANTXR2P58335 489 aa15□□□□□ -0.01
VPS52-220ENST00000493674 CTDSPL2Q05D32 466 aa15□□□□□ -0.01
VPS52-220ENST00000493674 DHX32Q7L7V1 743 aaKnown RBP15□□□□□ -0.01
VPS52-220ENST00000493674 NCOA7Q8NI08 942 aa15□□□□□ -0.01
VPS52-220ENST00000493674 NKX2-3Q8TAU0 364 aa15□□□□□ -0.01
VPS52-220ENST00000493674 TGFBRAP1Q8WUH2 860 aa15□□□□□ -0.01
VPS52-220ENST00000493674 IDI2Q9BXS1 227 aa15□□□□□ -0.01
VPS52-220ENST00000493674 PDRG1Q9NUG6 133 aa15□□□□□ -0.01
VPS52-220ENST00000493674 ZBTB12Q9Y330 459 aaPredicted RBP15□□□□□ -0.01
VPS52-220ENST00000493674 CYP2D7A0A087X1C5 515 aa14.99□□□□□ -0.01
VPS52-220ENST00000493674 SPDYE2BA6NHP3 402 aa14.99□□□□□ -0.01
VPS52-220ENST00000493674 USP17L8P0C7I0 530 aa14.99□□□□□ -0.01
VPS52-220ENST00000493674 SPDYE6P0CI01 402 aa14.99□□□□□ -0.01
VPS52-220ENST00000493674 EIF6P56537 245 aaKnown RBP14.99□□□□□ -0.01
VPS52-220ENST00000493674 TOB2Q14106 344 aaPredicted RBP14.99□□□□□ -0.01
VPS52-220ENST00000493674 CFAP100Q494V2 611 aa14.99□□□□□ -0.01
VPS52-220ENST00000493674 ZNF784Q8NCA9 323 aaPredicted RBP14.99□□□□□ -0.01
VPS52-220ENST00000493674 DPF2Q92785 391 aa14.99□□□□□ -0.01
VPS52-220ENST00000493674 CNNM2Q9H8M5 875 aa14.99□□□□□ -0.01
VPS52-220ENST00000493674 DDX4Q9NQI0 724 aaKnown RBP14.99□□□□□ -0.01
VPS52-220ENST00000493674 USP40Q9NVE5 1235 aa14.99□□□□□ -0.01
VPS52-220ENST00000493674 HDAC9Q9UKV0 1011 aa14.99□□□□□ -0.01
VPS52-220ENST00000493674 MYH15Q9Y2K3 1946 aa14.99□□□□□ -0.01
VPS52-220ENST00000493674 ATRNL1Q5VV63 1379 aa14.98□□□□□ -0.01
VPS52-220ENST00000493674 ORC4O43929 436 aa14.98□□□□□ -0.01
VPS52-220ENST00000493674 CYP2D6P10635 497 aa14.98□□□□□ -0.01
VPS52-220ENST00000493674 NT5C2P49902 561 aa14.98□□□□□ -0.01
VPS52-220ENST00000493674 EVX2Q03828 476 aa14.98□□□□□ -0.01
VPS52-220ENST00000493674 MAPKAPK5Q8IW41 473 aa14.98□□□□□ -0.01
VPS52-220ENST00000493674 PRMT6Q96LA8 375 aaPredicted RBP14.98□□□□□ -0.01
VPS52-220ENST00000493674 RNF41Q9H4P4 317 aaPredicted RBP14.98□□□□□ -0.01
VPS52-220ENST00000493674 MCM9Q9NXL9 1143 aa14.98□□□□□ -0.01
VPS52-220ENST00000493674 MINDY4BA8MYZ0 360 aa14.97□□□□□ -0.01
VPS52-220ENST00000493674 MCM5P33992 734 aa14.97□□□□□ -0.01
VPS52-220ENST00000493674 EVCP57679 992 aa14.97□□□□□ -0.01
VPS52-220ENST00000493674 CUL4AQ13619 759 aa14.97□□□□□ -0.01
VPS52-220ENST00000493674 SPDYE2Q495Y8 402 aa14.97□□□□□ -0.01
VPS52-220ENST00000493674 MFSD6Q6ZSS7 791 aa14.97□□□□□ -0.01
VPS52-220ENST00000493674 TMX3Q96JJ7 454 aa14.97□□□□□ -0.01
VPS52-220ENST00000493674 MTA3Q9BTC8 594 aa14.97□□□□□ -0.01
VPS52-220ENST00000493674 KRT23Q9C075 422 aa14.97□□□□□ -0.01
VPS52-220ENST00000493674 OSBPL5Q9H0X9 879 aaPredicted RBP14.97□□□□□ -0.01
VPS52-220ENST00000493674 FAM198AQ9UFP1 575 aa14.97□□□□□ -0.01
VPS52-220ENST00000493674 PAPPA2Q9BXP8 1791 aa14.97□□□□□ -0.01
VPS52-220ENST00000493674 B4E1Z4 1266 aa14.96□□□□□ -0.01
VPS52-220ENST00000493674 SLC4A3P48751 1232 aa14.96□□□□□ -0.01
VPS52-220ENST00000493674 GMPSP49915 693 aaPredicted RBP14.96□□□□□ -0.01
VPS52-220ENST00000493674 NFIAQ12857 509 aa14.96□□□□□ -0.01
VPS52-220ENST00000493674 TRDNQ13061 729 aa14.96□□□□□ -0.01
VPS52-220ENST00000493674 ANKRD1Q15327 319 aa14.96□□□□□ -0.01
VPS52-220ENST00000493674 FKBP1CQ5VVH2 108 aa14.96□□□□□ -0.01
VPS52-220ENST00000493674 CYB5R4Q7L1T6 521 aa14.96□□□□□ -0.01
VPS52-220ENST00000493674 RALYLQ86SE5 291 aaKnown RBP14.96□□□□□ -0.01
VPS52-220ENST00000493674 GPC2Q8N158 579 aa14.96□□□□□ -0.01
VPS52-220ENST00000493674 OGFOD1Q8N543 542 aa14.96□□□□□ -0.01
VPS52-220ENST00000493674 TCEANC2Q96MN5 208 aa14.96□□□□□ -0.01
VPS52-220ENST00000493674 INCENPQ9NQS7 918 aa14.96□□□□□ -0.01
VPS52-220ENST00000493674 LIMCH1Q9UPQ0 1083 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms