RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 NEDD4P46934 1319 aa22.35■■□□□ 1.17
NECTIN3-211ENST00000493615 HMGB1P09429 215 aaKnown RBP22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 USP17L8P0C7I0 530 aa22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 CYP2D6P10635 497 aa22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 MCM2P49736 904 aa22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 TOB2Q14106 344 aaPredicted RBP22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 CERS3Q8IU89 383 aa22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 MAPKAPK5Q8IW41 473 aa22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 MB21D2Q8IYB1 491 aaPredicted RBP22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 ANAPC4Q9UJX5 808 aa22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 ADAMTSL1Q8N6G6 1762 aa22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 PLCG2P16885 1265 aa22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 HDLBPQ00341 1268 aaKnown RBP22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 ZDHHC15Q96MV8 337 aa22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 MCM9Q9NXL9 1143 aa22.34■■□□□ 1.17
NECTIN3-211ENST00000493615 BAZ2AQ9UIF9 1905 aaKnown RBP22.33■■□□□ 1.17
NECTIN3-211ENST00000493615 SLC4A8Q2Y0W8 1093 aa22.33■■□□□ 1.17
NECTIN3-211ENST00000493615 AKNAD1Q5T1N1 836 aa22.33■■□□□ 1.17
NECTIN3-211ENST00000493615 NCOA7Q8NI08 942 aa22.33■■□□□ 1.17
NECTIN3-211ENST00000493615 ALDH8A1Q9H2A2 487 aaPredicted RBP22.33■■□□□ 1.17
NECTIN3-211ENST00000493615 TIAM2Q8IVF5 1701 aa22.33■■□□□ 1.16
NECTIN3-211ENST00000493615 CDC42EP5Q6NZY7 148 aa22.32■■□□□ 1.16
NECTIN3-211ENST00000493615 STAG1Q8WVM7 1258 aa22.32■■□□□ 1.16
NECTIN3-211ENST00000493615 FOXD4L1Q9NU39 408 aa22.32■■□□□ 1.16
NECTIN3-211ENST00000493615 USP40Q9NVE5 1235 aa22.32■■□□□ 1.16
NECTIN3-211ENST00000493615 SERPINA10Q9UK55 444 aa22.32■■□□□ 1.16
NECTIN3-211ENST00000493615 PSME4Q14997 1843 aa22.32■■□□□ 1.16
NECTIN3-211ENST00000493615 LAMA4Q16363 1823 aa22.32■■□□□ 1.16
NECTIN3-211ENST00000493615 ANTXR2P58335 489 aa22.32■■□□□ 1.16
NECTIN3-211ENST00000493615 SBK1Q52WX2 424 aa22.32■■□□□ 1.16
NECTIN3-211ENST00000493615 Q6ZUG5 572 aa22.32■■□□□ 1.16
NECTIN3-211ENST00000493615 LIMCH1Q9UPQ0 1083 aa22.32■■□□□ 1.16
NECTIN3-211ENST00000493615 MYO3BQ8WXR4 1341 aa22.31■■□□□ 1.16
NECTIN3-211ENST00000493615 B4E1Z4 1266 aa22.31■■□□□ 1.16
NECTIN3-211ENST00000493615 FZD9O00144 591 aa22.31■■□□□ 1.16
NECTIN3-211ENST00000493615 WDHD1O75717 1129 aaPredicted RBP22.31■■□□□ 1.16
NECTIN3-211ENST00000493615 LARGE1O95461 756 aa22.31■■□□□ 1.16
NECTIN3-211ENST00000493615 RBM5P52756 815 aaKnown RBP eCLIP22.31■■□□□ 1.16
NECTIN3-211ENST00000493615 CIAPIN1Q6FI81 312 aa22.31■■□□□ 1.16
NECTIN3-211ENST00000493615 MFSD6Q6ZSS7 791 aa22.31■■□□□ 1.16
NECTIN3-211ENST00000493615 RALYLQ86SE5 291 aaKnown RBP22.31■■□□□ 1.16
NECTIN3-211ENST00000493615 SAP30BPQ9UHR5 308 aaKnown RBP22.31■■□□□ 1.16
NECTIN3-211ENST00000493615 TPCN1Q9ULQ1 816 aa22.31■■□□□ 1.16
NECTIN3-211ENST00000493615 FLT1P17948 1338 aa22.31■■□□□ 1.16
NECTIN3-211ENST00000493615 TRDNQ13061 729 aa22.3■■□□□ 1.16
NECTIN3-211ENST00000493615 CYB5R4Q7L1T6 521 aa22.3■■□□□ 1.16
NECTIN3-211ENST00000493615 SLKQ9H2G2 1235 aaPredicted RBP22.3■■□□□ 1.16
NECTIN3-211ENST00000493615 DDX4Q9NQI0 724 aaKnown RBP22.3■■□□□ 1.16
NECTIN3-211ENST00000493615 GPHNQ9NQX3 736 aaPredicted RBP22.3■■□□□ 1.16
NECTIN3-211ENST00000493615 ARPP21Q9UBL0 812 aaPredicted RBP22.3■■□□□ 1.16
NECTIN3-211ENST00000493615 EIF6P56537 245 aaKnown RBP22.3■■□□□ 1.16
NECTIN3-211ENST00000493615 CFAP100Q494V2 611 aa22.3■■□□□ 1.16
NECTIN3-211ENST00000493615 C12orf60Q5U649 245 aa22.3■■□□□ 1.16
NECTIN3-211ENST00000493615 ZNF541Q9H0D2 1346 aa22.29■■□□□ 1.16
NECTIN3-211ENST00000493615 PRC1O43663 620 aa22.29■■□□□ 1.16
NECTIN3-211ENST00000493615 MCM5P33992 734 aa22.29■■□□□ 1.16
NECTIN3-211ENST00000493615 PLCD1P51178 756 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 PICALMQ13492 652 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 AGBL3Q8NEM8 1001 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 BRF1Q92994 677 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 PRMT6Q96LA8 375 aaPredicted RBP22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 AGXT2Q9BYV1 514 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 KDM4AO75164 1064 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 FGRP09769 529 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 CACNB3P54284 484 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 NFIAQ12857 509 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 CUL4AQ13619 759 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 ANKRD1Q15327 319 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 ME3Q16798 604 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 RRP12Q5JTH9 1297 aaKnown RBP22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 ZSWIM5Q9P217 1185 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 GJA3Q9Y6H8 435 aa22.28■■□□□ 1.16
NECTIN3-211ENST00000493615 PRDM1O75626 825 aa22.27■■□□□ 1.16
NECTIN3-211ENST00000493615 HSP90AA1P07900 732 aaKnown RBP22.27■■□□□ 1.16
NECTIN3-211ENST00000493615 TNIP1Q15025 636 aa22.27■■□□□ 1.16
NECTIN3-211ENST00000493615 RNF41Q9H4P4 317 aaPredicted RBP22.27■■□□□ 1.16
NECTIN3-211ENST00000493615 CNNM2Q9H8M5 875 aa22.27■■□□□ 1.16
NECTIN3-211ENST00000493615 TOMM22Q9NS69 142 aa22.27■■□□□ 1.16
NECTIN3-211ENST00000493615 CDK5RAP2Q96SN8 1893 aa22.27■■□□□ 1.16
NECTIN3-211ENST00000493615 SHTN1A0MZ66 631 aa22.26■■□□□ 1.15
NECTIN3-211ENST00000493615 FGD1P98174 961 aa22.26■■□□□ 1.15
NECTIN3-211ENST00000493615 DYNLL2Q96FJ2 89 aa22.26■■□□□ 1.15
NECTIN3-211ENST00000493615 KRT23Q9C075 422 aa22.26■■□□□ 1.15
NECTIN3-211ENST00000493615 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.26■■□□□ 1.15
NECTIN3-211ENST00000493615 DDNO94850 711 aaPredicted RBP22.26■■□□□ 1.15
NECTIN3-211ENST00000493615 POLR3DP05423 398 aaPredicted RBP22.26■■□□□ 1.15
NECTIN3-211ENST00000493615 FBXL16Q8N461 479 aa22.26■■□□□ 1.15
NECTIN3-211ENST00000493615 OGFOD1Q8N543 542 aa22.26■■□□□ 1.15
NECTIN3-211ENST00000493615 TDRD3Q9H7E2 651 aaKnown RBP22.26■■□□□ 1.15
NECTIN3-211ENST00000493615 APOBRQ0VD83 1088 aa22.25■■□□□ 1.15
NECTIN3-211ENST00000493615 ST3GAL1Q11201 340 aa22.25■■□□□ 1.15
NECTIN3-211ENST00000493615 ZFPM1Q8IX07 1006 aa22.25■■□□□ 1.15
NECTIN3-211ENST00000493615 SPDYE2BA6NHP3 402 aa22.24■■□□□ 1.15
NECTIN3-211ENST00000493615 SPDYE6P0CI01 402 aa22.24■■□□□ 1.15
NECTIN3-211ENST00000493615 NECAB1Q8N987 351 aa22.24■■□□□ 1.15
NECTIN3-211ENST00000493615 ZSCAN31Q96LW9 406 aaPredicted RBP22.24■■□□□ 1.15
NECTIN3-211ENST00000493615 HDAC9Q9UKV0 1011 aa22.24■■□□□ 1.15
NECTIN3-211ENST00000493615 WDR19Q8NEZ3 1342 aa22.24■■□□□ 1.15
NECTIN3-211ENST00000493615 DDIT3P35638 169 aa22.24■■□□□ 1.15
NECTIN3-211ENST00000493615 DPY19L2Q6NUT2 758 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms