RNA–Protein interactions for RNA: ENST00000492464.1

MMP11-212, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-212ENST00000492464 FAM227BQ96M60 508 aa16.97■□□□□ 0.31
MMP11-212ENST00000492464 FAM198AQ9UFP1 575 aa16.97■□□□□ 0.31
MMP11-212ENST00000492464 COL2A1P02458 1487 aaPredicted RBP16.97■□□□□ 0.31
MMP11-212ENST00000492464 A0A0D9SFI3 127 aa16.96■□□□□ 0.31
MMP11-212ENST00000492464 TRAF5O00463 557 aa16.96■□□□□ 0.31
MMP11-212ENST00000492464 ITGBL1O95965 494 aaPredicted RBP16.96■□□□□ 0.31
MMP11-212ENST00000492464 NF2P35240 595 aa16.96■□□□□ 0.31
MMP11-212ENST00000492464 MCMDC2Q4G0Z9 681 aa16.96■□□□□ 0.31
MMP11-212ENST00000492464 MAPKAPK5Q8IW41 473 aa16.96■□□□□ 0.31
MMP11-212ENST00000492464 FAM151AQ8WW52 585 aa16.96■□□□□ 0.31
MMP11-212ENST00000492464 RUFY2Q8WXA3 655 aa16.96■□□□□ 0.31
MMP11-212ENST00000492464 CDCA5Q96FF9 252 aa16.96■□□□□ 0.31
MMP11-212ENST00000492464 DDRGK1Q96HY6 314 aa16.96■□□□□ 0.31
MMP11-212ENST00000492464 SEC62Q99442 399 aaKnown RBP16.96■□□□□ 0.31
MMP11-212ENST00000492464 TMEM39BQ9GZU3 492 aa16.96■□□□□ 0.31
MMP11-212ENST00000492464 DDX4Q9NQI0 724 aaKnown RBP16.96■□□□□ 0.31
MMP11-212ENST00000492464 FLT1P17948 1338 aa16.96■□□□□ 0.3
MMP11-212ENST00000492464 GNAT2P19087 354 aa16.95■□□□□ 0.3
MMP11-212ENST00000492464 MFAP1P55081 439 aaKnown RBP16.95■□□□□ 0.3
MMP11-212ENST00000492464 CWC27Q6UX04 472 aaKnown RBP16.95■□□□□ 0.3
MMP11-212ENST00000492464 ZSCAN29Q8IWY8 852 aaPredicted RBP16.95■□□□□ 0.3
MMP11-212ENST00000492464 STRBPQ96SI9 672 aaKnown RBP16.95■□□□□ 0.3
MMP11-212ENST00000492464 SLC4A4Q9Y6R1 1079 aa16.95■□□□□ 0.3
MMP11-212ENST00000492464 DOCK1Q14185 1865 aa16.95■□□□□ 0.3
MMP11-212ENST00000492464 CHMLP26374 656 aa16.94■□□□□ 0.3
MMP11-212ENST00000492464 SUPT20HL1Q3ZLR7 823 aa16.94■□□□□ 0.3
MMP11-212ENST00000492464 PRAMEF18Q5VWM3 479 aa16.94■□□□□ 0.3
MMP11-212ENST00000492464 CASC1Q6TDU7 716 aa16.94■□□□□ 0.3
MMP11-212ENST00000492464 CCDC129Q6ZRS4 1044 aa16.94■□□□□ 0.3
MMP11-212ENST00000492464 SDR42E1Q8WUS8 393 aa16.94■□□□□ 0.3
MMP11-212ENST00000492464 HOOK2Q96ED9 719 aa16.94■□□□□ 0.3
MMP11-212ENST00000492464 OSBPL5Q9H0X9 879 aaPredicted RBP16.94■□□□□ 0.3
MMP11-212ENST00000492464 ZNF408Q9H9D4 720 aa16.94■□□□□ 0.3
MMP11-212ENST00000492464 ATP8A2Q9NTI2 1148 aa16.94■□□□□ 0.3
MMP11-212ENST00000492464 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
MMP11-212ENST00000492464 PASKQ96RG2 1323 aa16.94■□□□□ 0.3
MMP11-212ENST00000492464 ATRNL1Q5VV63 1379 aa16.93■□□□□ 0.3
MMP11-212ENST00000492464 DLK2Q6UY11 383 aa16.93■□□□□ 0.3
MMP11-212ENST00000492464 SAP30BPQ9UHR5 308 aaKnown RBP16.93■□□□□ 0.3
MMP11-212ENST00000492464 RAD50Q92878 1312 aa16.93■□□□□ 0.3
MMP11-212ENST00000492464 PRKAB2O43741 272 aa16.92■□□□□ 0.3
MMP11-212ENST00000492464 CDC45O75419 566 aa16.92■□□□□ 0.3
MMP11-212ENST00000492464 CELF2O95319 508 aaKnown RBP16.92■□□□□ 0.3
MMP11-212ENST00000492464 APPP05067 770 aa16.92■□□□□ 0.3
MMP11-212ENST00000492464 NBPF12Q5TAG4 269 aaPredicted RBP16.92■□□□□ 0.3
MMP11-212ENST00000492464 ZFPM1Q8IX07 1006 aa16.92■□□□□ 0.3
MMP11-212ENST00000492464 AMOTL1Q8IY63 956 aa16.92■□□□□ 0.3
MMP11-212ENST00000492464 TEPSINQ96N21 525 aa16.92■□□□□ 0.3
MMP11-212ENST00000492464 CSRNP1Q96S65 589 aa16.92■□□□□ 0.3
MMP11-212ENST00000492464 NACAP1Q9BZK3 213 aa16.92■□□□□ 0.3
MMP11-212ENST00000492464 DHX36Q9H2U1 1008 aaKnown RBP16.92■□□□□ 0.3
MMP11-212ENST00000492464 SSC5DA1L4H1 1573 aa16.92■□□□□ 0.3
MMP11-212ENST00000492464 HLA-DOAP06340 250 aa16.91■□□□□ 0.3
MMP11-212ENST00000492464 FMR1Q06787 632 aaKnown RBP eCLIP16.91■□□□□ 0.3
MMP11-212ENST00000492464 TTLL12Q14166 644 aaPredicted RBP16.91■□□□□ 0.3
MMP11-212ENST00000492464 DCAF15Q66K64 600 aa16.91■□□□□ 0.3
MMP11-212ENST00000492464 GIMAP6Q6P9H5 292 aa16.91■□□□□ 0.3
MMP11-212ENST00000492464 ZNF589Q86UQ0 364 aaPredicted RBP16.91■□□□□ 0.3
MMP11-212ENST00000492464 DCP1AQ9NPI6 582 aaPredicted RBP16.91■□□□□ 0.3
MMP11-212ENST00000492464 MCM9Q9NXL9 1143 aa16.91■□□□□ 0.3
MMP11-212ENST00000492464 DDTLA6NHG4 134 aaPredicted RBP16.9■□□□□ 0.3
MMP11-212ENST00000492464 GSG1L2A8MUP6 293 aa16.9■□□□□ 0.3
MMP11-212ENST00000492464 POLR3DP05423 398 aaPredicted RBP16.9■□□□□ 0.3
MMP11-212ENST00000492464 TDO2P48775 406 aa16.9■□□□□ 0.3
MMP11-212ENST00000492464 CDAN1Q8IWY9 1227 aa16.9■□□□□ 0.3
MMP11-212ENST00000492464 PALD1Q9ULE6 856 aa16.9■□□□□ 0.3
MMP11-212ENST00000492464 PATL2C9JE40 543 aaKnown RBP16.89■□□□□ 0.29
MMP11-212ENST00000492464 PPP1R12BO60237 982 aaPredicted RBP16.89■□□□□ 0.29
MMP11-212ENST00000492464 SLC4A8Q2Y0W8 1093 aa16.89■□□□□ 0.29
MMP11-212ENST00000492464 SH3BP5LQ7L8J4 393 aa16.89■□□□□ 0.29
MMP11-212ENST00000492464 TTC6Q86TZ1 520 aa16.89■□□□□ 0.29
MMP11-212ENST00000492464 C2orf69Q8N8R5 385 aa16.89■□□□□ 0.29
MMP11-212ENST00000492464 TRIM34Q9BYJ4 488 aa16.89■□□□□ 0.29
MMP11-212ENST00000492464 GBA2Q9HCG7 927 aaPredicted RBP16.89■□□□□ 0.29
MMP11-212ENST00000492464 PI4KBQ9UBF8 816 aa16.89■□□□□ 0.29
MMP11-212ENST00000492464 MKRN1Q9UHC7 482 aaKnown RBP16.89■□□□□ 0.29
MMP11-212ENST00000492464 TMEM88BA6NKF7 163 aa16.88■□□□□ 0.29
MMP11-212ENST00000492464 C1QTNF8P60827 252 aa16.88■□□□□ 0.29
MMP11-212ENST00000492464 FKBP1BP68106 108 aa16.88■□□□□ 0.29
MMP11-212ENST00000492464 ARMC9Q7Z3E5 817 aa16.88■□□□□ 0.29
MMP11-212ENST00000492464 CRACR2BQ8N4Y2 399 aaPredicted RBP16.88■□□□□ 0.29
MMP11-212ENST00000492464 ESYT1Q9BSJ8 1104 aa16.88■□□□□ 0.29
MMP11-212ENST00000492464 NAPBQ9H115 298 aa16.88■□□□□ 0.29
MMP11-212ENST00000492464 ARPP21Q9UBL0 812 aaPredicted RBP16.88■□□□□ 0.29
MMP11-212ENST00000492464 PHIPQ8WWQ0 1821 aa16.87■□□□□ 0.29
MMP11-212ENST00000492464 SGSM2O43147 1006 aa16.87■□□□□ 0.29
MMP11-212ENST00000492464 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
MMP11-212ENST00000492464 APLP1P51693 650 aa16.87■□□□□ 0.29
MMP11-212ENST00000492464 PRKG1Q13976 671 aa16.87■□□□□ 0.29
MMP11-212ENST00000492464 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
MMP11-212ENST00000492464 CST9Q5W186 159 aa16.87■□□□□ 0.29
MMP11-212ENST00000492464 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
MMP11-212ENST00000492464 ZNF341Q9BYN7 854 aa16.87■□□□□ 0.29
MMP11-212ENST00000492464 EPB41L4AQ9HCS5 686 aaPredicted RBP16.87■□□□□ 0.29
MMP11-212ENST00000492464 HERC5Q9UII4 1024 aaKnown RBP16.87■□□□□ 0.29
MMP11-212ENST00000492464 MYH4Q9Y623 1939 aa16.87■□□□□ 0.29
MMP11-212ENST00000492464 PTPRFP10586 1907 aa16.86■□□□□ 0.29
MMP11-212ENST00000492464 USP17L12C9JPN9 530 aa16.86■□□□□ 0.29
MMP11-212ENST00000492464 USP17L21D6R901 530 aa16.86■□□□□ 0.29
MMP11-212ENST00000492464 HSPD1P10809 573 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms