RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 OGFOD1Q8N543 542 aa13.66□□□□□ -0.22
CMSS1-205ENST00000489081 TBC1D2Q9BYX2 928 aa13.66□□□□□ -0.22
CMSS1-205ENST00000489081 USP40Q9NVE5 1235 aa13.66□□□□□ -0.22
CMSS1-205ENST00000489081 ANAPC4Q9UJX5 808 aa13.66□□□□□ -0.22
CMSS1-205ENST00000489081 GOLGB1Q14789 3259 aaKnown RBP13.65□□□□□ -0.22
CMSS1-205ENST00000489081 ST18O60284 1047 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 WDHD1O75717 1129 aaPredicted RBP13.65□□□□□ -0.22
CMSS1-205ENST00000489081 CPA1P15085 419 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 RPS6KB1P23443 525 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 MMP14P50281 582 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 CTDSPL2Q05D32 466 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 GPR162Q16538 588 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 BLOC1S2Q6QNY1 142 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 MAPKAPK5Q8IW41 473 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 DPF2Q92785 391 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 TTC14Q96N46 770 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 IPO9Q96P70 1041 aaKnown RBP13.65□□□□□ -0.22
CMSS1-205ENST00000489081 RNF181Q9P0P0 153 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 ARPP21Q9UBL0 812 aaPredicted RBP13.65□□□□□ -0.22
CMSS1-205ENST00000489081 CYP46A1Q9Y6A2 500 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 TACC3Q9Y6A5 838 aa13.65□□□□□ -0.22
CMSS1-205ENST00000489081 FLT1P17948 1338 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 ADAMTSL1Q8N6G6 1762 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 CYP2D7A0A087X1C5 515 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 MINDY4BA8MYZ0 360 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 SMIM22K7EJ46 135 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 HMGB1P09429 215 aaKnown RBP13.64□□□□□ -0.23
CMSS1-205ENST00000489081 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 GMPSP49915 693 aaPredicted RBP13.64□□□□□ -0.23
CMSS1-205ENST00000489081 ZNF280AP59817 542 aaPredicted RBP13.64□□□□□ -0.23
CMSS1-205ENST00000489081 BECN1Q14457 450 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 DLGAP5Q15398 846 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 AKNAD1Q5T1N1 836 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 MTMR14Q8NCE2 650 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 STAG1Q8WVM7 1258 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 PRMT6Q96LA8 375 aaPredicted RBP13.64□□□□□ -0.23
CMSS1-205ENST00000489081 DDX4Q9NQI0 724 aaKnown RBP13.64□□□□□ -0.23
CMSS1-205ENST00000489081 MCM9Q9NXL9 1143 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 GJA3Q9Y6H8 435 aa13.64□□□□□ -0.23
CMSS1-205ENST00000489081 GRIN3BO60391 1043 aa13.63□□□□□ -0.23
CMSS1-205ENST00000489081 CYP2D6P10635 497 aa13.63□□□□□ -0.23
CMSS1-205ENST00000489081 C12orf60Q5U649 245 aa13.63□□□□□ -0.23
CMSS1-205ENST00000489081 C9orf131Q5VYM1 1079 aa13.63□□□□□ -0.23
CMSS1-205ENST00000489081 HSCBQ8IWL3 235 aa13.63□□□□□ -0.23
CMSS1-205ENST00000489081 MB21D2Q8IYB1 491 aaPredicted RBP13.63□□□□□ -0.23
CMSS1-205ENST00000489081 NCOA7Q8NI08 942 aa13.63□□□□□ -0.23
CMSS1-205ENST00000489081 ZBED3Q96IU2 234 aaPredicted RBP13.63□□□□□ -0.23
CMSS1-205ENST00000489081 IDI2Q9BXS1 227 aa13.63□□□□□ -0.23
CMSS1-205ENST00000489081 RNF41Q9H4P4 317 aaPredicted RBP13.63□□□□□ -0.23
CMSS1-205ENST00000489081 TDRD3Q9H7E2 651 aaKnown RBP13.63□□□□□ -0.23
CMSS1-205ENST00000489081 PDRG1Q9NUG6 133 aa13.63□□□□□ -0.23
CMSS1-205ENST00000489081 NEDD4P46934 1319 aa13.63□□□□□ -0.23
CMSS1-205ENST00000489081 TIAM2Q8IVF5 1701 aa13.62□□□□□ -0.23
CMSS1-205ENST00000489081 SHTN1A0MZ66 631 aa13.62□□□□□ -0.23
CMSS1-205ENST00000489081 MCM2P49736 904 aa13.62□□□□□ -0.23
CMSS1-205ENST00000489081 EXOSC10Q01780 885 aaKnown RBP13.62□□□□□ -0.23
CMSS1-205ENST00000489081 EVX2Q03828 476 aa13.62□□□□□ -0.23
CMSS1-205ENST00000489081 NFIAQ12857 509 aa13.62□□□□□ -0.23
CMSS1-205ENST00000489081 TRDNQ13061 729 aa13.62□□□□□ -0.23
CMSS1-205ENST00000489081 DHX32Q7L7V1 743 aaKnown RBP13.62□□□□□ -0.23
CMSS1-205ENST00000489081 RALYLQ86SE5 291 aaKnown RBP13.62□□□□□ -0.23
CMSS1-205ENST00000489081 GPC2Q8N158 579 aa13.62□□□□□ -0.23
CMSS1-205ENST00000489081 ALDH8A1Q9H2A2 487 aaPredicted RBP13.62□□□□□ -0.23
CMSS1-205ENST00000489081 CNNM2Q9H8M5 875 aa13.62□□□□□ -0.23
CMSS1-205ENST00000489081 INCENPQ9NQS7 918 aa13.62□□□□□ -0.23
CMSS1-205ENST00000489081 SAP30BPQ9UHR5 308 aaKnown RBP13.62□□□□□ -0.23
CMSS1-205ENST00000489081 LAMA4Q16363 1823 aa13.62□□□□□ -0.23
CMSS1-205ENST00000489081 ROBO3Q96MS0 1386 aa13.61□□□□□ -0.23
CMSS1-205ENST00000489081 B4E1Z4 1266 aa13.61□□□□□ -0.23
CMSS1-205ENST00000489081 K7ELQ4 463 aaPredicted RBP13.61□□□□□ -0.23
CMSS1-205ENST00000489081 POLR3DP05423 398 aaPredicted RBP13.61□□□□□ -0.23
CMSS1-205ENST00000489081 FGRP09769 529 aa13.61□□□□□ -0.23
CMSS1-205ENST00000489081 PCP11498 1178 aaKnown RBP13.61□□□□□ -0.23
CMSS1-205ENST00000489081 AK2P54819 239 aa13.61□□□□□ -0.23
CMSS1-205ENST00000489081 PICALMQ13492 652 aa13.61□□□□□ -0.23
CMSS1-205ENST00000489081 MFSD6Q6ZSS7 791 aa13.61□□□□□ -0.23
CMSS1-205ENST00000489081 MICALL2Q8IY33 904 aa13.61□□□□□ -0.23
CMSS1-205ENST00000489081 AMOTL1Q8IY63 956 aa13.61□□□□□ -0.23
CMSS1-205ENST00000489081 NKX2-3Q8TAU0 364 aa13.61□□□□□ -0.23
CMSS1-205ENST00000489081 TCEANC2Q96MN5 208 aa13.61□□□□□ -0.23
CMSS1-205ENST00000489081 OSBPL5Q9H0X9 879 aaPredicted RBP13.61□□□□□ -0.23
CMSS1-205ENST00000489081 MYOZ2Q9NPC6 264 aa13.61□□□□□ -0.23
CMSS1-205ENST00000489081 FAM198AQ9UFP1 575 aa13.61□□□□□ -0.23
CMSS1-205ENST00000489081 CNOT7Q9UIV1 285 aaKnown RBP13.61□□□□□ -0.23
CMSS1-205ENST00000489081 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.61□□□□□ -0.23
CMSS1-205ENST00000489081 SBF1O95248 1867 aa13.6□□□□□ -0.23
CMSS1-205ENST00000489081 SLC3A2P08195 630 aaKnown RBP13.6□□□□□ -0.23
CMSS1-205ENST00000489081 SLC4A3P48751 1232 aa13.6□□□□□ -0.23
CMSS1-205ENST00000489081 PLCD1P51178 756 aa13.6□□□□□ -0.23
CMSS1-205ENST00000489081 CACNB3P54284 484 aa13.6□□□□□ -0.23
CMSS1-205ENST00000489081 ANTXR2P58335 489 aa13.6□□□□□ -0.23
CMSS1-205ENST00000489081 SLC4A8Q2Y0W8 1093 aa13.6□□□□□ -0.23
CMSS1-205ENST00000489081 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
CMSS1-205ENST00000489081 STK11IPQ8N1F8 1099 aa13.6□□□□□ -0.23
CMSS1-205ENST00000489081 KRT23Q9C075 422 aa13.6□□□□□ -0.23
CMSS1-205ENST00000489081 TMOD2Q9NZR1 351 aa13.6□□□□□ -0.23
CMSS1-205ENST00000489081 ZNF70Q9UC06 446 aaPredicted RBP13.6□□□□□ -0.23
CMSS1-205ENST00000489081 DICER1Q9UPY3 1922 aaKnown RBP13.6□□□□□ -0.23
CMSS1-205ENST00000489081 WDR19Q8NEZ3 1342 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms