RNA–Protein interactions for RNA: ENST00000487803.5

SMIM7-209, Transcript of small integral membrane protein 7, humanhuman

TSL 1 (best)

Gene SMIM7, Length 2,190 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-209ENST00000487803 C17orf53Q8N3J3 647 aaPredicted RBP11.94□□□□□ -0.5
SMIM7-209ENST00000487803 STAG1Q8WVM7 1258 aa11.94□□□□□ -0.5
SMIM7-209ENST00000487803 CDC5LQ99459 802 aaKnown RBP11.94□□□□□ -0.5
SMIM7-209ENST00000487803 NACAP1Q9BZK3 213 aa11.94□□□□□ -0.5
SMIM7-209ENST00000487803 SENP2Q9HC62 589 aa11.94□□□□□ -0.5
SMIM7-209ENST00000487803 ZSWIM5Q9P217 1185 aa11.94□□□□□ -0.5
SMIM7-209ENST00000487803 BECN2A8MW95 431 aa11.93□□□□□ -0.5
SMIM7-209ENST00000487803 RXRAP19793 462 aa11.93□□□□□ -0.5
SMIM7-209ENST00000487803 IARSP41252 1262 aaKnown RBP11.93□□□□□ -0.5
SMIM7-209ENST00000487803 KCNQ4P56696 695 aa11.93□□□□□ -0.5
SMIM7-209ENST00000487803 HSP90AA2PQ14568 343 aaPredicted RBP11.93□□□□□ -0.5
SMIM7-209ENST00000487803 KRT40Q6A162 431 aa11.93□□□□□ -0.5
SMIM7-209ENST00000487803 CCDC186Q7Z3E2 898 aa11.93□□□□□ -0.5
SMIM7-209ENST00000487803 DRC7Q8IY82 874 aa11.93□□□□□ -0.5
SMIM7-209ENST00000487803 MRFAP1L1Q96HT8 127 aa11.93□□□□□ -0.5
SMIM7-209ENST00000487803 SDF4Q9BRK5 362 aa11.93□□□□□ -0.5
SMIM7-209ENST00000487803 MTA3Q9BTC8 594 aa11.93□□□□□ -0.5
SMIM7-209ENST00000487803 NAT10Q9H0A0 1025 aaKnown RBP11.93□□□□□ -0.5
SMIM7-209ENST00000487803 FAM217BQ9NTX9 383 aaPredicted RBP11.93□□□□□ -0.5
SMIM7-209ENST00000487803 ZNF804BA4D1E1 1349 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 CCDC69A6NI79 296 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 IFIT3O14879 490 aaKnown RBP11.92□□□□□ -0.5
SMIM7-209ENST00000487803 CMA1P23946 247 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 CTDSPL2Q05D32 466 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 SLC39A14Q15043 492 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 AXDND1Q5T1B0 1012 aaPredicted RBP11.92□□□□□ -0.5
SMIM7-209ENST00000487803 MFSD6Q6ZSS7 791 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 DHX40Q8IX18 779 aaKnown RBP11.92□□□□□ -0.5
SMIM7-209ENST00000487803 LCORLQ8N3X6 602 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 PHKBQ93100 1093 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 AIFM3Q96NN9 605 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 KIAA1468Q9P260 1216 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 CLIP2Q9UDT6 1046 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 SLC12A7Q9Y666 1083 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 SLC4A4Q9Y6R1 1079 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 A0A1B0GUL6 1792 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 RANBP6O60518 1105 aaKnown RBP11.92□□□□□ -0.5
SMIM7-209ENST00000487803 PPP6R2O75170 966 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 U2AF2P26368 475 aaKnown RBP eCLIP11.92□□□□□ -0.5
SMIM7-209ENST00000487803 GTF2E1P29083 439 aaPredicted RBP11.92□□□□□ -0.5
SMIM7-209ENST00000487803 TDO2P48775 406 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 FAM196AQ6ZSG2 479 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 MYRIPQ8NFW9 859 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 SETDB2Q96T68 719 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 INCENPQ9NQS7 918 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 TACC3Q9Y6A5 838 aa11.92□□□□□ -0.5
SMIM7-209ENST00000487803 COL4A1P02462 1669 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 PRKAB2O43741 272 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 ZNF202O95125 648 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 PRKCSHP14314 528 aaPredicted RBP11.91□□□□□ -0.5
SMIM7-209ENST00000487803 IFNAR1P17181 557 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 RCAN1P53805 252 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 TRIM29Q14134 588 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 SART3Q15020 963 aaKnown RBP11.91□□□□□ -0.5
SMIM7-209ENST00000487803 JMYQ8N9B5 988 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 WASF1Q92558 559 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 BPIFA3Q9BQP9 254 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 LRP2BPQ9P2M1 347 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 FMNL1O95466 1100 aaPredicted RBP11.91□□□□□ -0.5
SMIM7-209ENST00000487803 SSRP1Q08945 709 aaKnown RBP11.91□□□□□ -0.5
SMIM7-209ENST00000487803 SF3B3Q15393 1217 aaKnown RBP11.91□□□□□ -0.5
SMIM7-209ENST00000487803 SLC10A5Q5PT55 438 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 TIGD1Q96MW7 591 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 RNF41Q9H4P4 317 aaPredicted RBP11.91□□□□□ -0.5
SMIM7-209ENST00000487803 NRBP1Q9UHY1 535 aa11.91□□□□□ -0.5
SMIM7-209ENST00000487803 PFKFB1P16118 471 aa11.9□□□□□ -0.5
SMIM7-209ENST00000487803 GNL2Q13823 731 aaKnown RBP11.9□□□□□ -0.5
SMIM7-209ENST00000487803 UBE4AQ14139 1066 aa11.9□□□□□ -0.5
SMIM7-209ENST00000487803 PTPAQ15257 358 aa11.9□□□□□ -0.5
SMIM7-209ENST00000487803 ERFEQ4G0M1 354 aa11.9□□□□□ -0.5
SMIM7-209ENST00000487803 TRAPPC3LQ5T215 181 aa11.9□□□□□ -0.5
SMIM7-209ENST00000487803 TBC1D9BQ66K14 1250 aa11.9□□□□□ -0.5
SMIM7-209ENST00000487803 ANKRD18AQ8IVF6 992 aa11.9□□□□□ -0.5
SMIM7-209ENST00000487803 TMTC2Q8N394 836 aa11.9□□□□□ -0.5
SMIM7-209ENST00000487803 MAP3K14Q99558 947 aa11.9□□□□□ -0.5
SMIM7-209ENST00000487803 MYL10Q9BUA6 226 aa11.9□□□□□ -0.5
SMIM7-209ENST00000487803 GNL3LQ9NVN8 582 aaKnown RBP11.9□□□□□ -0.5
SMIM7-209ENST00000487803 UBR3Q6ZT12 1888 aa11.9□□□□□ -0.5
SMIM7-209ENST00000487803 MROH7-TTC4A0A0A0MT08 1334 aa11.9□□□□□ -0.5
SMIM7-209ENST00000487803 TAF1P21675 1872 aa11.89□□□□□ -0.51
SMIM7-209ENST00000487803 FAM237AA0A1B0GTK4 181 aa11.89□□□□□ -0.51
SMIM7-209ENST00000487803 WDHD1O75717 1129 aaPredicted RBP11.89□□□□□ -0.51
SMIM7-209ENST00000487803 SLC3A2P08195 630 aaKnown RBP11.89□□□□□ -0.51
SMIM7-209ENST00000487803 ADRA2BP18089 450 aa11.89□□□□□ -0.51
SMIM7-209ENST00000487803 RFC4P35249 363 aa11.89□□□□□ -0.51
SMIM7-209ENST00000487803 GTF2F1P35269 517 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMIM7-209ENST00000487803 RBM6P78332 1123 aaKnown RBP11.89□□□□□ -0.51
SMIM7-209ENST00000487803 WTAPQ15007 396 aa11.89□□□□□ -0.51
SMIM7-209ENST00000487803 ZRSR1Q15695 479 aaKnown RBP11.89□□□□□ -0.51
SMIM7-209ENST00000487803 TPTE2Q6XPS3 522 aa11.89□□□□□ -0.51
SMIM7-209ENST00000487803 AOPEPQ8N6M6 819 aa11.89□□□□□ -0.51
SMIM7-209ENST00000487803 MIGA1Q8NAN2 632 aa11.89□□□□□ -0.51
SMIM7-209ENST00000487803 ERCC4Q92889 916 aaPredicted RBP11.89□□□□□ -0.51
SMIM7-209ENST00000487803 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMIM7-209ENST00000487803 SLC26A6Q9BXS9 759 aa11.89□□□□□ -0.51
SMIM7-209ENST00000487803 BCL2L12Q9HB09 334 aa11.89□□□□□ -0.51
SMIM7-209ENST00000487803 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.89□□□□□ -0.51
SMIM7-209ENST00000487803 BSDC1Q9NW68 430 aaPredicted RBP11.89□□□□□ -0.51
SMIM7-209ENST00000487803 HPSEQ9Y251 543 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms