RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 RBM6P78332 1123 aaKnown RBP30.24■■■□□ 2.43
HLA-C-208ENST00000487245 CTDSPL2Q05D32 466 aa30.24■■■□□ 2.43
HLA-C-208ENST00000487245 SDF4Q9BRK5 362 aa30.24■■■□□ 2.43
HLA-C-208ENST00000487245 KIAA1468Q9P260 1216 aa30.24■■■□□ 2.43
HLA-C-208ENST00000487245 SLC12A7Q9Y666 1083 aa30.24■■■□□ 2.43
HLA-C-208ENST00000487245 A0A1B0GVL5 298 aa30.23■■■□□ 2.43
HLA-C-208ENST00000487245 KIF28PB7ZC32 967 aa30.23■■■□□ 2.43
HLA-C-208ENST00000487245 CMA1P23946 247 aa30.23■■■□□ 2.43
HLA-C-208ENST00000487245 TMTC2Q8N394 836 aa30.23■■■□□ 2.43
HLA-C-208ENST00000487245 LCORLQ8N3X6 602 aa30.23■■■□□ 2.43
HLA-C-208ENST00000487245 AXDND1Q5T1B0 1012 aaPredicted RBP30.23■■■□□ 2.43
HLA-C-208ENST00000487245 RC3H1Q5TC82 1133 aaKnown RBP30.23■■■□□ 2.43
HLA-C-208ENST00000487245 LRRC8AQ8IWT6 810 aa30.23■■■□□ 2.43
HLA-C-208ENST00000487245 NKX2-3Q8TAU0 364 aa30.23■■■□□ 2.43
HLA-C-208ENST00000487245 WASF1Q92558 559 aa30.23■■■□□ 2.43
HLA-C-208ENST00000487245 RIOK3O14730 519 aaKnown RBP30.22■■■□□ 2.43
HLA-C-208ENST00000487245 CDC27P30260 824 aa30.22■■■□□ 2.43
HLA-C-208ENST00000487245 TRIM29Q14134 588 aa30.22■■■□□ 2.43
HLA-C-208ENST00000487245 VPS72Q15906 364 aa30.22■■■□□ 2.43
HLA-C-208ENST00000487245 NTRK3Q16288 839 aa30.22■■■□□ 2.43
HLA-C-208ENST00000487245 MICU3Q86XE3 530 aa30.22■■■□□ 2.43
HLA-C-208ENST00000487245 ZNF710Q8N1W2 664 aa30.22■■■□□ 2.43
HLA-C-208ENST00000487245 CTIFO43310 598 aaKnown RBP30.21■■■□□ 2.43
HLA-C-208ENST00000487245 CYP7A1P22680 504 aa30.21■■■□□ 2.43
HLA-C-208ENST00000487245 SLC39A14Q15043 492 aa30.21■■■□□ 2.43
HLA-C-208ENST00000487245 CAVIN4Q5BKX8 364 aa30.21■■■□□ 2.43
HLA-C-208ENST00000487245 TIGD1Q96MW7 591 aa30.21■■■□□ 2.43
HLA-C-208ENST00000487245 NYXQ9GZU5 481 aa30.21■■■□□ 2.43
HLA-C-208ENST00000487245 RCAN1P53805 252 aa30.21■■■□□ 2.43
HLA-C-208ENST00000487245 SSRP1Q08945 709 aaKnown RBP30.21■■■□□ 2.43
HLA-C-208ENST00000487245 KRT40Q6A162 431 aa30.21■■■□□ 2.43
HLA-C-208ENST00000487245 PRKAB2O43741 272 aa30.2■■■□□ 2.42
HLA-C-208ENST00000487245 FAM98CQ17RN3 349 aaKnown RBP30.2■■■□□ 2.42
HLA-C-208ENST00000487245 ERICH2A1L162 156 aa30.19■■■□□ 2.42
HLA-C-208ENST00000487245 AOPEPQ8N6M6 819 aa30.19■■■□□ 2.42
HLA-C-208ENST00000487245 SENP2Q9HC62 589 aa30.19■■■□□ 2.42
HLA-C-208ENST00000487245 KCND1Q9NSA2 647 aa30.19■■■□□ 2.42
HLA-C-208ENST00000487245 FAM217BQ9NTX9 383 aaPredicted RBP30.19■■■□□ 2.42
HLA-C-208ENST00000487245 FAM237AA0A1B0GTK4 181 aa30.19■■■□□ 2.42
HLA-C-208ENST00000487245 PPP6R2O75170 966 aa30.19■■■□□ 2.42
HLA-C-208ENST00000487245 GTF2E1P29083 439 aaPredicted RBP30.19■■■□□ 2.42
HLA-C-208ENST00000487245 ANAPC4Q9UJX5 808 aa30.19■■■□□ 2.42
HLA-C-208ENST00000487245 MAGEB6P1A0A0J9YX57 407 aa30.18■■■□□ 2.42
HLA-C-208ENST00000487245 SMTNL1A8MU46 457 aa30.18■■■□□ 2.42
HLA-C-208ENST00000487245 IFNAR1P17181 557 aa30.18■■■□□ 2.42
HLA-C-208ENST00000487245 NLRP12P59046 1061 aa30.18■■■□□ 2.42
HLA-C-208ENST00000487245 JMYQ8N9B5 988 aa30.18■■■□□ 2.42
HLA-C-208ENST00000487245 INCENPQ9NQS7 918 aa30.18■■■□□ 2.42
HLA-C-208ENST00000487245 MINPP1Q9UNW1 487 aa30.18■■■□□ 2.42
HLA-C-208ENST00000487245 A0A1B0GUL6 1792 aa30.18■■■□□ 2.42
HLA-C-208ENST00000487245 SEMA3EO15041 775 aa30.17■■■□□ 2.42
HLA-C-208ENST00000487245 ZNF202O95125 648 aa30.17■■■□□ 2.42
HLA-C-208ENST00000487245 FMNL1O95466 1100 aaPredicted RBP30.17■■■□□ 2.42
HLA-C-208ENST00000487245 SCN7AQ01118 1682 aa30.17■■■□□ 2.42
HLA-C-208ENST00000487245 GNL2Q13823 731 aaKnown RBP30.17■■■□□ 2.42
HLA-C-208ENST00000487245 WTAPQ15007 396 aa30.17■■■□□ 2.42
HLA-C-208ENST00000487245 BCL2L12Q9HB09 334 aa30.17■■■□□ 2.42
HLA-C-208ENST00000487245 RAI14Q9P0K7 980 aa30.17■■■□□ 2.42
HLA-C-208ENST00000487245 IMPACTQ9P2X3 320 aa30.17■■■□□ 2.42
HLA-C-208ENST00000487245 TACC3Q9Y6A5 838 aa30.17■■■□□ 2.42
HLA-C-208ENST00000487245 CCDC196A0A1B0GTZ2 297 aa30.16■■■□□ 2.42
HLA-C-208ENST00000487245 SLC3A2P08195 630 aaKnown RBP30.16■■■□□ 2.42
HLA-C-208ENST00000487245 GSDMDP57764 484 aa30.16■■■□□ 2.42
HLA-C-208ENST00000487245 SYCP1Q15431 976 aa30.16■■■□□ 2.42
HLA-C-208ENST00000487245 VPS37DQ86XT2 251 aa30.16■■■□□ 2.42
HLA-C-208ENST00000487245 GJB4Q9NTQ9 266 aa30.16■■■□□ 2.42
HLA-C-208ENST00000487245 NARFQ9UHQ1 456 aa30.16■■■□□ 2.42
HLA-C-208ENST00000487245 PAXBP1Q9Y5B6 917 aa30.16■■■□□ 2.42
HLA-C-208ENST00000487245 RXRAP19793 462 aa30.16■■■□□ 2.42
HLA-C-208ENST00000487245 U2AF2P26368 475 aaKnown RBP eCLIP30.16■■■□□ 2.42
HLA-C-208ENST00000487245 MIGA1Q8NAN2 632 aa30.16■■■□□ 2.42
HLA-C-208ENST00000487245 PHKBQ93100 1093 aa30.16■■■□□ 2.42
HLA-C-208ENST00000487245 OSBPL5Q9H0X9 879 aaPredicted RBP30.16■■■□□ 2.42
HLA-C-208ENST00000487245 RPS6KA4O75676 772 aa30.15■■■□□ 2.42
HLA-C-208ENST00000487245 PFKFB1P16118 471 aa30.15■■■□□ 2.42
HLA-C-208ENST00000487245 GYG1P46976 350 aa30.15■■■□□ 2.42
HLA-C-208ENST00000487245 PIP4K2BP78356 416 aa30.15■■■□□ 2.42
HLA-C-208ENST00000487245 PPARAQ07869 468 aa30.15■■■□□ 2.42
HLA-C-208ENST00000487245 ZRSR1Q15695 479 aaKnown RBP30.15■■■□□ 2.42
HLA-C-208ENST00000487245 ABCF2Q9UG63 623 aa30.15■■■□□ 2.42
HLA-C-208ENST00000487245 HPSEQ9Y251 543 aa30.15■■■□□ 2.42
HLA-C-208ENST00000487245 DHX8Q14562 1220 aaKnown RBP30.14■■■□□ 2.42
HLA-C-208ENST00000487245 RRP12Q5JTH9 1297 aaKnown RBP30.14■■■□□ 2.42
HLA-C-208ENST00000487245 C3orf67Q6ZVT6 689 aa30.14■■■□□ 2.42
HLA-C-208ENST00000487245 AIFM3Q96NN9 605 aa30.14■■■□□ 2.42
HLA-C-208ENST00000487245 TOMM22Q9NS69 142 aa30.14■■■□□ 2.42
HLA-C-208ENST00000487245 RANBP6O60518 1105 aaKnown RBP30.14■■■□□ 2.42
HLA-C-208ENST00000487245 TNNT1P13805 278 aa30.14■■■□□ 2.42
HLA-C-208ENST00000487245 RTN1Q16799 776 aa30.14■■■□□ 2.42
HLA-C-208ENST00000487245 TBC1D9BQ66K14 1250 aa30.14■■■□□ 2.42
HLA-C-208ENST00000487245 TRIM22Q8IYM9 498 aa30.14■■■□□ 2.42
HLA-C-208ENST00000487245 CCDC94Q9BW85 323 aaPredicted RBP30.14■■■□□ 2.42
HLA-C-208ENST00000487245 PDS5AQ29RF7 1337 aaKnown RBP30.13■■■□□ 2.41
HLA-C-208ENST00000487245 PPP2R5BQ15173 497 aa30.13■■■□□ 2.41
HLA-C-208ENST00000487245 PTPAQ15257 358 aa30.13■■■□□ 2.41
HLA-C-208ENST00000487245 DPCR1Q3MIW9 517 aa30.13■■■□□ 2.41
HLA-C-208ENST00000487245 ANKRD7Q92527 254 aa30.13■■■□□ 2.41
HLA-C-208ENST00000487245 NGLY1Q96IV0 654 aa30.13■■■□□ 2.41
HLA-C-208ENST00000487245 SLC26A6Q9BXS9 759 aa30.13■■■□□ 2.41
HLA-C-208ENST00000487245 COL4A1P02462 1669 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms