RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ITIH2P19823 946 aa6.57□□□□□ -1.36
SNRNP27-204ENST00000487029 FKBP4Q02790 459 aaKnown RBP eCLIP6.57□□□□□ -1.36
SNRNP27-204ENST00000487029 ANGEL2Q5VTE6 544 aaKnown RBP6.57□□□□□ -1.36
SNRNP27-204ENST00000487029 FYB2Q5VWT5 728 aa6.57□□□□□ -1.36
SNRNP27-204ENST00000487029 BHLHE22Q8NFJ8 381 aaPredicted RBP6.57□□□□□ -1.36
SNRNP27-204ENST00000487029 EHD4Q9H223 541 aa6.57□□□□□ -1.36
SNRNP27-204ENST00000487029 TNKS2Q9H2K2 1166 aa6.57□□□□□ -1.36
SNRNP27-204ENST00000487029 ATXN3LQ9H3M9 355 aa6.57□□□□□ -1.36
SNRNP27-204ENST00000487029 TMEM265A0A087WTH1 108 aa6.56□□□□□ -1.36
SNRNP27-204ENST00000487029 RNGTTO60942 597 aaKnown RBP6.56□□□□□ -1.36
SNRNP27-204ENST00000487029 RAP1GAPP47736 663 aa6.56□□□□□ -1.36
SNRNP27-204ENST00000487029 ZNF211Q13398 564 aaPredicted RBP6.56□□□□□ -1.36
SNRNP27-204ENST00000487029 KIF4BQ2VIQ3 1234 aa6.56□□□□□ -1.36
SNRNP27-204ENST00000487029 FAM214BQ7L5A3 538 aa6.56□□□□□ -1.36
SNRNP27-204ENST00000487029 ABCB6Q9NP58 842 aa6.56□□□□□ -1.36
SNRNP27-204ENST00000487029 NPHS2Q9NP85 383 aa6.56□□□□□ -1.36
SNRNP27-204ENST00000487029 SLFN14P0C7P3 912 aa6.55□□□□□ -1.36
SNRNP27-204ENST00000487029 ORC1Q13415 861 aa6.55□□□□□ -1.36
SNRNP27-204ENST00000487029 KCNMB1Q16558 191 aa6.55□□□□□ -1.36
SNRNP27-204ENST00000487029 LILRA6Q6PI73 481 aa6.55□□□□□ -1.36
SNRNP27-204ENST00000487029 ARHGAP27Q6ZUM4 889 aa6.55□□□□□ -1.36
SNRNP27-204ENST00000487029 TOP6BLQ8N6T0 577 aa6.55□□□□□ -1.36
SNRNP27-204ENST00000487029 CTNND2Q9UQB3 1225 aa6.55□□□□□ -1.36
SNRNP27-204ENST00000487029 CARNS1A5YM72 827 aa6.54□□□□□ -1.36
SNRNP27-204ENST00000487029 ABL1P00519 1130 aa6.54□□□□□ -1.36
SNRNP27-204ENST00000487029 KRT1P04264 644 aa6.54□□□□□ -1.36
SNRNP27-204ENST00000487029 PDIA4P13667 645 aaKnown RBP6.54□□□□□ -1.36
SNRNP27-204ENST00000487029 SF3B2Q13435 895 aaKnown RBP6.54□□□□□ -1.36
SNRNP27-204ENST00000487029 LRRC56Q8IYG6 542 aaPredicted RBP6.54□□□□□ -1.36
SNRNP27-204ENST00000487029 PCOLCE2Q9UKZ9 415 aa6.54□□□□□ -1.36
SNRNP27-204ENST00000487029 TSPAN15O95858 294 aa6.53□□□□□ -1.36
SNRNP27-204ENST00000487029 PTPN12Q05209 780 aaKnown RBP6.53□□□□□ -1.36
SNRNP27-204ENST00000487029 ZP2Q05996 745 aa6.53□□□□□ -1.36
SNRNP27-204ENST00000487029 ECM1Q16610 540 aa6.53□□□□□ -1.36
SNRNP27-204ENST00000487029 PRR23BQ6ZRT6 265 aa6.53□□□□□ -1.36
SNRNP27-204ENST00000487029 ISL2Q96A47 359 aa6.53□□□□□ -1.36
SNRNP27-204ENST00000487029 TOX2Q96NM4 488 aa6.53□□□□□ -1.36
SNRNP27-204ENST00000487029 FAM53CQ9NYF3 392 aa6.53□□□□□ -1.36
SNRNP27-204ENST00000487029 GSTP1P09211 210 aaKnown RBP6.52□□□□□ -1.37
SNRNP27-204ENST00000487029 IKZF1Q13422 519 aa6.52□□□□□ -1.37
SNRNP27-204ENST00000487029 SYDE1Q6ZW31 735 aaPredicted RBP6.52□□□□□ -1.37
SNRNP27-204ENST00000487029 PDZD3Q86UT5 571 aa6.52□□□□□ -1.37
SNRNP27-204ENST00000487029 SPACA3Q8IXA5 215 aa6.52□□□□□ -1.37
SNRNP27-204ENST00000487029 RETREG2Q8NC44 543 aa6.52□□□□□ -1.37
SNRNP27-204ENST00000487029 STK35Q8TDR2 534 aa6.52□□□□□ -1.37
SNRNP27-204ENST00000487029 KRTAP9-3Q9BYQ3 159 aa6.52□□□□□ -1.37
SNRNP27-204ENST00000487029 SNX11Q9Y5W9 270 aa6.52□□□□□ -1.37
SNRNP27-204ENST00000487029 TMEM238LA0A1B0GVL6 79 aa6.51□□□□□ -1.37
SNRNP27-204ENST00000487029 NKPD1Q17RQ9 610 aa6.51□□□□□ -1.37
SNRNP27-204ENST00000487029 RPS26P11Q5JNZ5 115 aaPredicted RBP6.51□□□□□ -1.37
SNRNP27-204ENST00000487029 PRPF40BQ6NWY9 871 aaKnown RBP6.51□□□□□ -1.37
SNRNP27-204ENST00000487029 LMCD1Q9NZU5 365 aa6.51□□□□□ -1.37
SNRNP27-204ENST00000487029 NCANO14594 1321 aa6.5□□□□□ -1.37
SNRNP27-204ENST00000487029 PRRG2O14669 202 aa6.5□□□□□ -1.37
SNRNP27-204ENST00000487029 C1QTNF9P0C862 333 aa6.5□□□□□ -1.37
SNRNP27-204ENST00000487029 ZSCAN22P10073 491 aaPredicted RBP6.5□□□□□ -1.37
SNRNP27-204ENST00000487029 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.5□□□□□ -1.37
SNRNP27-204ENST00000487029 TRAIPQ9BWF2 469 aa6.5□□□□□ -1.37
SNRNP27-204ENST00000487029 KCNK12Q9HB15 430 aa6.5□□□□□ -1.37
SNRNP27-204ENST00000487029 KRT82Q9NSB4 513 aa6.5□□□□□ -1.37
SNRNP27-204ENST00000487029 BUD31P41223 144 aaPredicted RBP6.49□□□□□ -1.37
SNRNP27-204ENST00000487029 PDE4CQ08493 712 aa6.49□□□□□ -1.37
SNRNP27-204ENST00000487029 ZC3H12AQ5D1E8 599 aaKnown RBP6.49□□□□□ -1.37
SNRNP27-204ENST00000487029 UBE3DQ7Z6J8 389 aa6.49□□□□□ -1.37
SNRNP27-204ENST00000487029 ZSCAN18Q8TBC5 510 aaPredicted RBP6.49□□□□□ -1.37
SNRNP27-204ENST00000487029 ASB11Q8WXH4 323 aa6.49□□□□□ -1.37
SNRNP27-204ENST00000487029 CCDC74AQ96AQ1 378 aa6.49□□□□□ -1.37
SNRNP27-204ENST00000487029 SSU72Q9NP77 194 aaKnown RBP6.49□□□□□ -1.37
SNRNP27-204ENST00000487029 C19orf73Q9NVV2 129 aa6.49□□□□□ -1.37
SNRNP27-204ENST00000487029 RBAK-RBAKDNI3L0D1 243 aa6.48□□□□□ -1.37
SNRNP27-204ENST00000487029 CPNE3O75131 537 aaKnown RBP6.48□□□□□ -1.37
SNRNP27-204ENST00000487029 GRM2Q14416 872 aa6.48□□□□□ -1.37
SNRNP27-204ENST00000487029 TTLL10Q6ZVT0 673 aa6.48□□□□□ -1.37
SNRNP27-204ENST00000487029 ANKLE2Q86XL3 938 aa6.48□□□□□ -1.37
SNRNP27-204ENST00000487029 SIAH1Q8IUQ4 282 aa6.48□□□□□ -1.37
SNRNP27-204ENST00000487029 KCNB2Q92953 911 aa6.48□□□□□ -1.37
SNRNP27-204ENST00000487029 B8ZZF3 427 aa6.47□□□□□ -1.37
SNRNP27-204ENST00000487029 GLI1P08151 1106 aa6.47□□□□□ -1.37
SNRNP27-204ENST00000487029 MPRIPQ6WCQ1 1025 aa6.47□□□□□ -1.37
SNRNP27-204ENST00000487029 RNF214Q8ND24 703 aa6.47□□□□□ -1.37
SNRNP27-204ENST00000487029 PPP1R16BQ96T49 567 aa6.47□□□□□ -1.37
SNRNP27-204ENST00000487029 BRPF3Q9ULD4 1205 aa6.47□□□□□ -1.37
SNRNP27-204ENST00000487029 USTQ9Y2C2 406 aa6.47□□□□□ -1.37
SNRNP27-204ENST00000487029 PITPNM2Q9BZ72 1349 aa6.47□□□□□ -1.37
SNRNP27-204ENST00000487029 IGF2BP3O00425 579 aaKnown RBP eCLIP6.46□□□□□ -1.38
SNRNP27-204ENST00000487029 GADD45BO75293 160 aaPredicted RBP6.46□□□□□ -1.38
SNRNP27-204ENST00000487029 NTF4P34130 210 aa6.46□□□□□ -1.38
SNRNP27-204ENST00000487029 AFMP43652 599 aa6.46□□□□□ -1.38
SNRNP27-204ENST00000487029 MPZL3Q6UWV2 235 aa6.46□□□□□ -1.38
SNRNP27-204ENST00000487029 EPS8L3Q8TE67 593 aaKnown RBP6.46□□□□□ -1.38
SNRNP27-204ENST00000487029 FAM129BQ96TA1 746 aa6.46□□□□□ -1.38
SNRNP27-204ENST00000487029 ICMTO60725 284 aa6.45□□□□□ -1.38
SNRNP27-204ENST00000487029 IGHA2P01877 340 aa6.45□□□□□ -1.38
SNRNP27-204ENST00000487029 ERVK-24P63145 666 aa6.45□□□□□ -1.38
SNRNP27-204ENST00000487029 ARHGAP4P98171 946 aa6.45□□□□□ -1.38
SNRNP27-204ENST00000487029 KIRREL1Q96J84 757 aa6.45□□□□□ -1.38
SNRNP27-204ENST00000487029 CARS2Q9HA77 564 aaKnown RBP6.45□□□□□ -1.38
SNRNP27-204ENST00000487029 PRDM10Q9NQV6 1147 aa6.45□□□□□ -1.38
SNRNP27-204ENST00000487029 TMEM39AQ9NV64 488 aa6.45□□□□□ -1.38
SNRNP27-204ENST00000487029 CSADQ9Y600 493 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms