RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 LEFTY1O75610 366 aa7.15□□□□□ -1.26
SNRNP40-205ENST00000486941 AP3B2Q13367 1082 aa7.15□□□□□ -1.26
SNRNP40-205ENST00000486941 KIF4BQ2VIQ3 1234 aa7.15□□□□□ -1.26
SNRNP40-205ENST00000486941 OGFOD2Q6N063 350 aa7.15□□□□□ -1.26
SNRNP40-205ENST00000486941 MPRIPQ6WCQ1 1025 aa7.15□□□□□ -1.26
SNRNP40-205ENST00000486941 FAM181AQ8N9Y4 354 aa7.15□□□□□ -1.26
SNRNP40-205ENST00000486941 FLCNQ8NFG4 579 aa7.15□□□□□ -1.26
SNRNP40-205ENST00000486941 ALKBH8Q96BT7 664 aaKnown RBP7.15□□□□□ -1.26
SNRNP40-205ENST00000486941 RBCK1Q9BYM8 510 aa7.15□□□□□ -1.26
SNRNP40-205ENST00000486941 RAD54L2Q9Y4B4 1467 aa7.15□□□□□ -1.27
SNRNP40-205ENST00000486941 WDR97A6NE52 1622 aa7.14□□□□□ -1.27
SNRNP40-205ENST00000486941 NEFMP07197 916 aa7.14□□□□□ -1.27
SNRNP40-205ENST00000486941 GSTP1P09211 210 aaKnown RBP7.14□□□□□ -1.27
SNRNP40-205ENST00000486941 C14orf37Q86TY3 774 aa7.14□□□□□ -1.27
SNRNP40-205ENST00000486941 PLD6Q8N2A8 252 aaKnown RBP7.14□□□□□ -1.27
SNRNP40-205ENST00000486941 TDRD9Q8NDG6 1382 aaKnown RBP7.14□□□□□ -1.27
SNRNP40-205ENST00000486941 ZFYVE1Q9HBF4 777 aa7.14□□□□□ -1.27
SNRNP40-205ENST00000486941 ARAP1Q96P48 1450 aa7.13□□□□□ -1.27
SNRNP40-205ENST00000486941 PAPLNO95428 1278 aa7.13□□□□□ -1.27
SNRNP40-205ENST00000486941 FAM87AP0C7U9 286 aa7.13□□□□□ -1.27
SNRNP40-205ENST00000486941 CD96P40200 585 aa7.13□□□□□ -1.27
SNRNP40-205ENST00000486941 FCGRTP55899 365 aa7.13□□□□□ -1.27
SNRNP40-205ENST00000486941 CYP27A1Q02318 531 aa7.13□□□□□ -1.27
SNRNP40-205ENST00000486941 DSC3Q14574 896 aa7.13□□□□□ -1.27
SNRNP40-205ENST00000486941 TTLL4Q14679 1199 aa7.13□□□□□ -1.27
SNRNP40-205ENST00000486941 HP1BP3Q5SSJ5 553 aaPredicted RBP7.13□□□□□ -1.27
SNRNP40-205ENST00000486941 B4GALNT3Q6L9W6 998 aa7.13□□□□□ -1.27
SNRNP40-205ENST00000486941 TMC7Q7Z402 723 aa7.13□□□□□ -1.27
SNRNP40-205ENST00000486941 FGD5Q6ZNL6 1462 aa7.12□□□□□ -1.27
SNRNP40-205ENST00000486941 CARMIL2Q6F5E8 1435 aa7.12□□□□□ -1.27
SNRNP40-205ENST00000486941 SOWAHDA6NJG2 315 aa7.12□□□□□ -1.27
SNRNP40-205ENST00000486941 RBAK-RBAKDNI3L0D1 243 aa7.12□□□□□ -1.27
SNRNP40-205ENST00000486941 YBX3P16989 372 aaKnown RBP eCLIP7.12□□□□□ -1.272e-10■□□□□ 11.1
SNRNP40-205ENST00000486941 ID3Q02535 119 aa7.12□□□□□ -1.27
SNRNP40-205ENST00000486941 DDX54Q8TDD1 881 aaKnown RBP7.12□□□□□ -1.27
SNRNP40-205ENST00000486941 TMC1Q8TDI8 760 aa7.12□□□□□ -1.27
SNRNP40-205ENST00000486941 BCO2Q9BYV7 579 aa7.12□□□□□ -1.27
SNRNP40-205ENST00000486941 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.12□□□□□ -1.27
SNRNP40-205ENST00000486941 HCLS1P14317 486 aaPredicted RBP7.11□□□□□ -1.27
SNRNP40-205ENST00000486941 FAM214BQ7L5A3 538 aa7.11□□□□□ -1.27
SNRNP40-205ENST00000486941 ARID3AQ99856 593 aa7.11□□□□□ -1.27
SNRNP40-205ENST00000486941 CACNA2D2Q9NY47 1150 aa7.11□□□□□ -1.27
SNRNP40-205ENST00000486941 ADAMTS6Q9UKP5 1117 aa7.11□□□□□ -1.27
SNRNP40-205ENST00000486941 PLAGL2Q9UPG8 496 aa7.11□□□□□ -1.27
SNRNP40-205ENST00000486941 CUX1P39880 1505 aa7.11□□□□□ -1.27
SNRNP40-205ENST00000486941 SNAPC4Q5SXM2 1469 aa7.11□□□□□ -1.27
SNRNP40-205ENST00000486941 MAGI1Q96QZ7 1491 aaPredicted RBP7.11□□□□□ -1.27
SNRNP40-205ENST00000486941 CD8BP10966 210 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 ZNF792Q3KQV3 632 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 ZC3H12AQ5D1E8 599 aaKnown RBP7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 RASIP1Q5U651 963 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 NXPE4Q6UWF7 544 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 DTHD1Q6ZMT9 781 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 UBE3DQ7Z6J8 389 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 SMYD4Q8IYR2 804 aaPredicted RBP7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 C3orf58Q8NDZ4 430 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 ISL2Q96A47 359 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 DMRTB1Q96MA1 342 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 KRT82Q9NSB4 513 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 TMEM39AQ9NV64 488 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 TRAK1Q9UPV9 953 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 SLC5A6Q9Y289 635 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 SYNJ1O43426 1573 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 CLASP1Q7Z460 1538 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 GRIN2BQ13224 1484 aa7.1□□□□□ -1.27
SNRNP40-205ENST00000486941 OXCT1P55809 520 aa7.09□□□□□ -1.27
SNRNP40-205ENST00000486941 ZNF252P-AS1Q0IIN9 211 aa7.09□□□□□ -1.27
SNRNP40-205ENST00000486941 AGBL5Q8NDL9 886 aa7.09□□□□□ -1.27
SNRNP40-205ENST00000486941 HEXIM2Q96MH2 286 aaKnown RBP7.09□□□□□ -1.27
SNRNP40-205ENST00000486941 SETDB2Q96T68 719 aa7.09□□□□□ -1.27
SNRNP40-205ENST00000486941 DUSP23Q9BVJ7 150 aa7.09□□□□□ -1.27
SNRNP40-205ENST00000486941 ATXN3LQ9H3M9 355 aa7.09□□□□□ -1.27
SNRNP40-205ENST00000486941 ARID1BQ8NFD5 2236 aaPredicted RBP7.08□□□□□ -1.28
SNRNP40-205ENST00000486941 SLFN14P0C7P3 912 aa7.08□□□□□ -1.28
SNRNP40-205ENST00000486941 ARNTP27540 789 aa7.08□□□□□ -1.28
SNRNP40-205ENST00000486941 NTF4P34130 210 aa7.08□□□□□ -1.28
SNRNP40-205ENST00000486941 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.08□□□□□ -1.28
SNRNP40-205ENST00000486941 SULF2Q8IWU5 870 aa7.08□□□□□ -1.28
SNRNP40-205ENST00000486941 GRIN3AQ8TCU5 1115 aa7.08□□□□□ -1.28
SNRNP40-205ENST00000486941 KCNB2Q92953 911 aa7.08□□□□□ -1.28
SNRNP40-205ENST00000486941 MBNL3Q9NUK0 354 aaKnown RBP7.08□□□□□ -1.28
SNRNP40-205ENST00000486941 GPN3Q9UHW5 284 aaPredicted RBP7.08□□□□□ -1.28
SNRNP40-205ENST00000486941 SYNJ2O15056 1496 aa7.08□□□□□ -1.28
SNRNP40-205ENST00000486941 SUPT5HO00267 1087 aaKnown RBP7.07□□□□□ -1.28
SNRNP40-205ENST00000486941 PAGE1O75459 146 aa7.07□□□□□ -1.28
SNRNP40-205ENST00000486941 C8AP07357 584 aa7.07□□□□□ -1.28
SNRNP40-205ENST00000486941 JUNBP17275 347 aaPredicted RBP7.07□□□□□ -1.28
SNRNP40-205ENST00000486941 BMP6P22004 513 aa7.07□□□□□ -1.28
SNRNP40-205ENST00000486941 FZD5Q13467 585 aa7.07□□□□□ -1.28
SNRNP40-205ENST00000486941 CYP27C1Q4G0S4 372 aa7.07□□□□□ -1.28
SNRNP40-205ENST00000486941 POU5F2Q8N7G0 328 aa7.07□□□□□ -1.28
SNRNP40-205ENST00000486941 NETO1Q8TDF5 533 aa7.07□□□□□ -1.28
SNRNP40-205ENST00000486941 GPBAR1Q8TDU6 330 aa7.07□□□□□ -1.28
SNRNP40-205ENST00000486941 PBRM1Q86U86 1689 aa7.06□□□□□ -1.28
SNRNP40-205ENST00000486941 GAPVD1Q14C86 1478 aa7.06□□□□□ -1.28
SNRNP40-205ENST00000486941 TREHO43280 583 aa7.06□□□□□ -1.28
SNRNP40-205ENST00000486941 RNGTTO60942 597 aaKnown RBP7.06□□□□□ -1.28
SNRNP40-205ENST00000486941 RNASE1P07998 156 aaKnown RBP7.06□□□□□ -1.28
SNRNP40-205ENST00000486941 FUT4P22083 530 aa7.06□□□□□ -1.28
SNRNP40-205ENST00000486941 JAG1P78504 1218 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms