RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 DEXIO95424 95 aa15.14■□□□□ 0.01
HMGN1-216ENST00000486741 SF3B2Q13435 895 aaKnown RBP15.14■□□□□ 0.01
HMGN1-216ENST00000486741 FAM196AQ6ZSG2 479 aa15.14■□□□□ 0.01
HMGN1-216ENST00000486741 ZSWIM5Q9P217 1185 aa15.14■□□□□ 0.01
HMGN1-216ENST00000486741 TNKSO95271 1327 aa15.14■□□□□ 0.01
HMGN1-216ENST00000486741 TFAP4Q01664 338 aa15.14■□□□□ 0.01
HMGN1-216ENST00000486741 MAPK8IP1Q9UQF2 711 aa15.14■□□□□ 0.01
HMGN1-216ENST00000486741 PALLDQ8WX93 1383 aa15.14■□□□□ 0.01
HMGN1-216ENST00000486741 RRAGBQ5VZM2 374 aa15.13■□□□□ 0.01
HMGN1-216ENST00000486741 PPP1R9BQ96SB3 815 aa15.13■□□□□ 0.01
HMGN1-216ENST00000486741 TCP11L1Q9NUJ3 509 aa15.13■□□□□ 0.01
HMGN1-216ENST00000486741 RTL9Q8NET4 1388 aa15.13■□□□□ 0.01
HMGN1-216ENST00000486741 ERVV-1B6SEH8 477 aa15.13■□□□□ 0.01
HMGN1-216ENST00000486741 NDUFA8P51970 172 aa15.13■□□□□ 0.01
HMGN1-216ENST00000486741 ENOX2Q16206 610 aaKnown RBP15.13■□□□□ 0.01
HMGN1-216ENST00000486741 KIF18AQ8NI77 898 aa15.13■□□□□ 0.01
HMGN1-216ENST00000486741 ARHGAP23Q9P227 1491 aa15.13■□□□□ 0.01
HMGN1-216ENST00000486741 LRMPQ12912 555 aa15.12■□□□□ 0.01
HMGN1-216ENST00000486741 HS1BP3Q53T59 392 aa15.12■□□□□ 0.01
HMGN1-216ENST00000486741 TMOD2Q9NZR1 351 aa15.12■□□□□ 0.01
HMGN1-216ENST00000486741 CARMIL3Q8ND23 1372 aa15.12■□□□□ 0.01
HMGN1-216ENST00000486741 FANCBQ8NB91 859 aa15.12■□□□□ 0.01
HMGN1-216ENST00000486741 MSL1Q68DK7 614 aa15.12■□□□□ 0.01
HMGN1-216ENST00000486741 TSC1Q92574 1164 aa15.12■□□□□ 0.01
HMGN1-216ENST00000486741 ZNHIT6Q9NWK9 470 aaKnown RBP15.12■□□□□ 0.01
HMGN1-216ENST00000486741 KDM6AO15550 1401 aaPredicted RBP15.11■□□□□ 0.01
HMGN1-216ENST00000486741 PFKFB1P16118 471 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 PNOCQ13519 176 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 ARHGAP29Q52LW3 1261 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 ATL3Q6DD88 541 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 TBC1D10CQ8IV04 446 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 ZNF609O15014 1411 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 N4BP3O15049 544 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 STAT6P42226 847 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 CAGE1Q8TC20 777 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 NUP88Q99567 741 aaPredicted RBP15.11■□□□□ 0.01
HMGN1-216ENST00000486741 BMP2KQ9NSY1 1161 aaPredicted RBP15.11■□□□□ 0.01
HMGN1-216ENST00000486741 GGA1Q9UJY5 639 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 SLIT1O75093 1534 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 ELP1O95163 1332 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 GSDMDP57764 484 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 RILPL1Q5EBL4 403 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 PDCL2Q8N4E4 241 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 STRBPQ96SI9 672 aaKnown RBP15.11■□□□□ 0.01
HMGN1-216ENST00000486741 DEF6Q9H4E7 631 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 ZSWIM4Q9H7M6 989 aa15.11■□□□□ 0.01
HMGN1-216ENST00000486741 USP42Q9H9J4 1324 aaKnown RBP15.1■□□□□ 0.01
HMGN1-216ENST00000486741 CALM1P0DP23 149 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 CALM2P0DP24 149 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 CALM3P0DP25 149 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 DDIT3P35638 169 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 ZNF75DP51815 510 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 RESTQ13127 1097 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 ZNF827Q17R98 1081 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 ADALQ6DHV7 355 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 CELF1Q92879 486 aaKnown RBP15.1■□□□□ 0.01
HMGN1-216ENST00000486741 ZBTB9Q96C00 473 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 ZHX1Q9UKY1 873 aaPredicted RBP15.1■□□□□ 0.01
HMGN1-216ENST00000486741 RIPOR2Q9Y4F9 1068 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 CCP110O43303 1012 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 PTPN21Q16825 1174 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 TRMT44Q8IYL2 757 aaKnown RBP15.1■□□□□ 0.01
HMGN1-216ENST00000486741 GPCPD1Q9NPB8 672 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 FER1L4A9Z1Z3 1794 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 HLA-DOAP06340 250 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 GTF2IP78347 998 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 SNW1Q13573 536 aaKnown RBP15.1■□□□□ 0.01
HMGN1-216ENST00000486741 CCDC178Q5BJE1 867 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 CEP135Q66GS9 1140 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 MAP7D2Q96T17 732 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 UBA5Q9GZZ9 404 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 ARGLU1Q9NWB6 273 aaPredicted RBP15.1■□□□□ 0.01
HMGN1-216ENST00000486741 NRBP1Q9UHY1 535 aa15.1■□□□□ 0.01
HMGN1-216ENST00000486741 GOLGA8HP0CJ92 632 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 LETM2Q2VYF4 491 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 MRVI1Q9Y6F6 885 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 ZMYM6O95789 1325 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 NR5A1Q13285 461 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 KANK3Q6NY19 840 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 TNNI2P48788 182 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 DIXDC1Q155Q3 683 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 ZNF804BA4D1E1 1349 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 UTYO14607 1347 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 TCP10Q12799 353 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 NOM1Q5C9Z4 860 aaKnown RBP15.09■□□□□ 0.01
HMGN1-216ENST00000486741 MFSD14BQ5SR56 506 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 CYB5R4Q7L1T6 521 aa15.09■□□□□ 0.01
HMGN1-216ENST00000486741 CBX1P83916 185 aa15.08■□□□□ 0
HMGN1-216ENST00000486741 UBE4AQ14139 1066 aa15.08■□□□□ 0
HMGN1-216ENST00000486741 WDR66Q8TBY9 1149 aa15.08■□□□□ 0
HMGN1-216ENST00000486741 PGBD1Q96JS3 809 aa15.08■□□□□ 0
HMGN1-216ENST00000486741 UBR1Q8IWV7 1749 aa15.08■□□□□ 0
HMGN1-216ENST00000486741 TRIM37O94972 964 aa15.08■□□□□ 0
HMGN1-216ENST00000486741 YEATS4O95619 227 aa15.08■□□□□ 0
HMGN1-216ENST00000486741 GNAQP50148 359 aa15.08■□□□□ 0
HMGN1-216ENST00000486741 TRIM28Q13263 835 aaKnown RBP15.08■□□□□ 0
HMGN1-216ENST00000486741 MARCH10Q8NA82 808 aaPredicted RBP15.08■□□□□ 0
HMGN1-216ENST00000486741 ZSCAN10Q96SZ4 725 aaPredicted RBP15.08■□□□□ 0
HMGN1-216ENST00000486741 NOSTRINQ8IVI9 506 aa15.08■□□□□ 0
HMGN1-216ENST00000486741 UBXN4Q92575 508 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms