RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 USP17L12C9JPN9 530 aa22.58■■□□□ 1.21
PCCB-216ENST00000483687 USP17L21D6R901 530 aa22.58■■□□□ 1.21
PCCB-216ENST00000483687 WNT10BO00744 389 aa22.58■■□□□ 1.21
PCCB-216ENST00000483687 MYO1BO43795 1136 aa22.58■■□□□ 1.21
PCCB-216ENST00000483687 CACNB3P54284 484 aa22.58■■□□□ 1.21
PCCB-216ENST00000483687 TSGA10IPQ3SY00 556 aa22.58■■□□□ 1.21
PCCB-216ENST00000483687 CTR9Q6PD62 1173 aa22.58■■□□□ 1.21
PCCB-216ENST00000483687 SAMD7Q7Z3H4 446 aa22.58■■□□□ 1.21
PCCB-216ENST00000483687 TMOD2Q9NZR1 351 aa22.58■■□□□ 1.21
PCCB-216ENST00000483687 DDX60LQ5H9U9 1706 aaKnown RBP22.57■■□□□ 1.2
PCCB-216ENST00000483687 PPARAQ07869 468 aa22.57■■□□□ 1.2
PCCB-216ENST00000483687 NFIAQ12857 509 aa22.57■■□□□ 1.2
PCCB-216ENST00000483687 KRT32Q14532 448 aa22.57■■□□□ 1.2
PCCB-216ENST00000483687 AMOTL1Q8IY63 956 aa22.57■■□□□ 1.2
PCCB-216ENST00000483687 IL17RAQ96F46 866 aa22.57■■□□□ 1.2
PCCB-216ENST00000483687 ZBED3Q96IU2 234 aaPredicted RBP22.57■■□□□ 1.2
PCCB-216ENST00000483687 DDX4Q9NQI0 724 aaKnown RBP22.57■■□□□ 1.2
PCCB-216ENST00000483687 CLRN2A0PK11 232 aa22.57■■□□□ 1.2
PCCB-216ENST00000483687 EGFRP00533 1210 aa22.57■■□□□ 1.2
PCCB-216ENST00000483687 LMOD1P29536 600 aaPredicted RBP22.57■■□□□ 1.2
PCCB-216ENST00000483687 NBPF9Q3BBW0 867 aa22.57■■□□□ 1.2
PCCB-216ENST00000483687 ADCK5Q3MIX3 580 aa22.57■■□□□ 1.2
PCCB-216ENST00000483687 TBC1D10BQ4KMP7 808 aaPredicted RBP22.57■■□□□ 1.2
PCCB-216ENST00000483687 IDI2Q9BXS1 227 aa22.57■■□□□ 1.2
PCCB-216ENST00000483687 SAP30BPQ9UHR5 308 aaKnown RBP22.57■■□□□ 1.2
PCCB-216ENST00000483687 CYP2D7A0A087X1C5 515 aa22.56■■□□□ 1.2
PCCB-216ENST00000483687 KIF4BQ2VIQ3 1234 aa22.56■■□□□ 1.2
PCCB-216ENST00000483687 SLC4A8Q2Y0W8 1093 aa22.56■■□□□ 1.2
PCCB-216ENST00000483687 SPDYE2Q495Y8 402 aa22.56■■□□□ 1.2
PCCB-216ENST00000483687 SBK1Q52WX2 424 aa22.56■■□□□ 1.2
PCCB-216ENST00000483687 JAKMIP1Q96N16 626 aaKnown RBP22.56■■□□□ 1.2
PCCB-216ENST00000483687 ZNF70Q9UC06 446 aaPredicted RBP22.56■■□□□ 1.2
PCCB-216ENST00000483687 E7EWF7 191 aa22.55■■□□□ 1.2
PCCB-216ENST00000483687 POLR3DP05423 398 aaPredicted RBP22.55■■□□□ 1.2
PCCB-216ENST00000483687 EPS15P42566 896 aa22.55■■□□□ 1.2
PCCB-216ENST00000483687 CTDSPL2Q05D32 466 aa22.55■■□□□ 1.2
PCCB-216ENST00000483687 RABEP1Q15276 862 aa22.55■■□□□ 1.2
PCCB-216ENST00000483687 NBPF3Q9H094 633 aa22.55■■□□□ 1.2
PCCB-216ENST00000483687 GLTPD2A6NH11 291 aa22.54■■□□□ 1.2
PCCB-216ENST00000483687 PSMA5P28066 241 aa22.54■■□□□ 1.2
PCCB-216ENST00000483687 STOX1Q6ZVD7 989 aa22.54■■□□□ 1.2
PCCB-216ENST00000483687 TBC1D10CQ8IV04 446 aa22.54■■□□□ 1.2
PCCB-216ENST00000483687 OSBPL5Q9H0X9 879 aaPredicted RBP22.54■■□□□ 1.2
PCCB-216ENST00000483687 VEZTQ9HBM0 779 aa22.54■■□□□ 1.2
PCCB-216ENST00000483687 CYP2D6P10635 497 aa22.54■■□□□ 1.2
PCCB-216ENST00000483687 CASTP20810 708 aaKnown RBP22.54■■□□□ 1.2
PCCB-216ENST00000483687 TCP10Q12799 353 aa22.54■■□□□ 1.2
PCCB-216ENST00000483687 C12orf60Q5U649 245 aa22.54■■□□□ 1.2
PCCB-216ENST00000483687 FAM198AQ9UFP1 575 aa22.54■■□□□ 1.2
PCCB-216ENST00000483687 ANAPC4Q9UJX5 808 aa22.54■■□□□ 1.2
PCCB-216ENST00000483687 NPM3O75607 178 aaKnown RBP22.53■■□□□ 1.2
PCCB-216ENST00000483687 STK11IPQ8N1F8 1099 aa22.53■■□□□ 1.2
PCCB-216ENST00000483687 NEK1Q96PY6 1258 aa22.53■■□□□ 1.2
PCCB-216ENST00000483687 TCP10L2B9ZVM9 353 aa22.52■■□□□ 1.2
PCCB-216ENST00000483687 SMIM22K7EJ46 135 aa22.52■■□□□ 1.2
PCCB-216ENST00000483687 ANP32AP39687 249 aaKnown RBP22.52■■□□□ 1.2
PCCB-216ENST00000483687 EVX2Q03828 476 aa22.52■■□□□ 1.2
PCCB-216ENST00000483687 AKNAD1Q5T1N1 836 aa22.52■■□□□ 1.2
PCCB-216ENST00000483687 TRPM4Q8TD43 1214 aa22.52■■□□□ 1.2
PCCB-216ENST00000483687 L3MBTL3Q96JM7 780 aaPredicted RBP22.52■■□□□ 1.2
PCCB-216ENST00000483687 UPF3BQ9BZI7 483 aaKnown RBP22.52■■□□□ 1.2
PCCB-216ENST00000483687 TM6SF1Q9BZW5 370 aa22.52■■□□□ 1.2
PCCB-216ENST00000483687 ENTPD3O75355 529 aa22.51■■□□□ 1.19
PCCB-216ENST00000483687 SLC3A2P08195 630 aaKnown RBP22.51■■□□□ 1.19
PCCB-216ENST00000483687 TRDNQ13061 729 aa22.51■■□□□ 1.19
PCCB-216ENST00000483687 MFSD6Q6ZSS7 791 aa22.51■■□□□ 1.19
PCCB-216ENST00000483687 STAG1Q8WVM7 1258 aa22.51■■□□□ 1.19
PCCB-216ENST00000483687 RNF41Q9H4P4 317 aaPredicted RBP22.51■■□□□ 1.19
PCCB-216ENST00000483687 PLCD1P51178 756 aa22.51■■□□□ 1.19
PCCB-216ENST00000483687 NEK4P51957 841 aa22.51■■□□□ 1.19
PCCB-216ENST00000483687 BLOC1S2Q6QNY1 142 aa22.51■■□□□ 1.19
PCCB-216ENST00000483687 ZFPM1Q8IX07 1006 aa22.51■■□□□ 1.19
PCCB-216ENST00000483687 ADARB2Q9NS39 739 aaKnown RBP22.51■■□□□ 1.19
PCCB-216ENST00000483687 CYP46A1Q9Y6A2 500 aa22.51■■□□□ 1.19
PCCB-216ENST00000483687 FKBP1CQ5VVH2 108 aa22.5■■□□□ 1.19
PCCB-216ENST00000483687 RALYLQ86SE5 291 aaKnown RBP22.5■■□□□ 1.19
PCCB-216ENST00000483687 TTC6Q86TZ1 520 aa22.5■■□□□ 1.19
PCCB-216ENST00000483687 ZSCAN29Q8IWY8 852 aaPredicted RBP22.5■■□□□ 1.19
PCCB-216ENST00000483687 NCOA7Q8NI08 942 aa22.5■■□□□ 1.19
PCCB-216ENST00000483687 ZSWIM6Q9HCJ5 1215 aa22.5■■□□□ 1.19
PCCB-216ENST00000483687 TOMM22Q9NS69 142 aa22.5■■□□□ 1.19
PCCB-216ENST00000483687 NEDD4P46934 1319 aa22.5■■□□□ 1.19
PCCB-216ENST00000483687 ROBO3Q96MS0 1386 aa22.49■■□□□ 1.19
PCCB-216ENST00000483687 HMGB1P09429 215 aaKnown RBP22.49■■□□□ 1.19
PCCB-216ENST00000483687 CPA1P15085 419 aa22.49■■□□□ 1.19
PCCB-216ENST00000483687 RUFY3Q7L099 469 aa22.49■■□□□ 1.19
PCCB-216ENST00000483687 DHX36Q9H2U1 1008 aaKnown RBP22.49■■□□□ 1.19
PCCB-216ENST00000483687 INCENPQ9NQS7 918 aa22.49■■□□□ 1.19
PCCB-216ENST00000483687 HACL1Q9UJ83 578 aa22.49■■□□□ 1.19
PCCB-216ENST00000483687 SCN4AP35499 1836 aa22.49■■□□□ 1.19
PCCB-216ENST00000483687 HLA-DOAP06340 250 aa22.48■■□□□ 1.19
PCCB-216ENST00000483687 PDE4BQ07343 736 aa22.48■■□□□ 1.19
PCCB-216ENST00000483687 CNNM2Q9H8M5 875 aa22.48■■□□□ 1.19
PCCB-216ENST00000483687 TACC3Q9Y6A5 838 aa22.48■■□□□ 1.19
PCCB-216ENST00000483687 ASTN2O75129 1339 aaPredicted RBP22.48■■□□□ 1.19
PCCB-216ENST00000483687 PCP11498 1178 aaKnown RBP22.48■■□□□ 1.19
PCCB-216ENST00000483687 TNFAIP1Q13829 316 aa22.48■■□□□ 1.19
PCCB-216ENST00000483687 COL9A3Q14050 684 aaPredicted RBP22.48■■□□□ 1.19
PCCB-216ENST00000483687 DYNLL2Q96FJ2 89 aa22.48■■□□□ 1.19
PCCB-216ENST00000483687 KRT23Q9C075 422 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms