RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 ZNF503-AS2A6NEH8 195 aa8.07□□□□□ -1.12
SGIP1-210ENST00000483060 ITPKAP23677 461 aa8.07□□□□□ -1.12
SGIP1-210ENST00000483060 MTMR3Q13615 1198 aa8.07□□□□□ -1.12
SGIP1-210ENST00000483060 KIAA0319Q5VV43 1072 aa8.07□□□□□ -1.12
SGIP1-210ENST00000483060 DUSP23Q9BVJ7 150 aa8.07□□□□□ -1.12
SGIP1-210ENST00000483060 PLAGL2Q9UPG8 496 aa8.07□□□□□ -1.12
SGIP1-210ENST00000483060 LIG1P18858 919 aa8.06□□□□□ -1.12
SGIP1-210ENST00000483060 PTPN12Q05209 780 aaKnown RBP8.06□□□□□ -1.12
SGIP1-210ENST00000483060 ANKLE2Q86XL3 938 aa8.06□□□□□ -1.12
SGIP1-210ENST00000483060 C1QL4Q86Z23 238 aa8.06□□□□□ -1.12
SGIP1-210ENST00000483060 LRRC56Q8IYG6 542 aaPredicted RBP8.06□□□□□ -1.12
SGIP1-210ENST00000483060 TNKS2Q9H2K2 1166 aa8.06□□□□□ -1.12
SGIP1-210ENST00000483060 PCOLCE2Q9UKZ9 415 aa8.06□□□□□ -1.12
SGIP1-210ENST00000483060 NCANO14594 1321 aa8.05□□□□□ -1.12
SGIP1-210ENST00000483060 PRRG2O14669 202 aa8.05□□□□□ -1.12
SGIP1-210ENST00000483060 LEFTY1O75610 366 aa8.05□□□□□ -1.12
SGIP1-210ENST00000483060 PPP1R15AO75807 674 aaPredicted RBP8.05□□□□□ -1.12
SGIP1-210ENST00000483060 SF3B2Q13435 895 aaKnown RBP8.05□□□□□ -1.12
SGIP1-210ENST00000483060 ASB11Q8WXH4 323 aa8.05□□□□□ -1.12
SGIP1-210ENST00000483060 DISC1Q9NRI5 854 aa8.05□□□□□ -1.12
SGIP1-210ENST00000483060 RNGTTO60942 597 aaKnown RBP8.04□□□□□ -1.12
SGIP1-210ENST00000483060 ERICH6BQ5W0A0 696 aa8.04□□□□□ -1.12
SGIP1-210ENST00000483060 LCNL1Q6ZST4 164 aa8.04□□□□□ -1.12
SGIP1-210ENST00000483060 WDR89Q96FK6 387 aaPredicted RBP8.04□□□□□ -1.12
SGIP1-210ENST00000483060 CCDC86Q9H6F5 360 aaKnown RBP8.04□□□□□ -1.12
SGIP1-210ENST00000483060 WRNQ14191 1432 aaPredicted RBP eCLIP8.03□□□□□ -1.12
SGIP1-210ENST00000483060 NEFLP07196 543 aa8.03□□□□□ -1.12
SGIP1-210ENST00000483060 AFMP43652 599 aa8.03□□□□□ -1.12
SGIP1-210ENST00000483060 TTLL4Q14679 1199 aa8.03□□□□□ -1.12
SGIP1-210ENST00000483060 KIF4BQ2VIQ3 1234 aa8.03□□□□□ -1.12
SGIP1-210ENST00000483060 RPS26P11Q5JNZ5 115 aaPredicted RBP8.03□□□□□ -1.12
SGIP1-210ENST00000483060 EHD4Q9H223 541 aa8.03□□□□□ -1.12
SGIP1-210ENST00000483060 KRT82Q9NSB4 513 aa8.03□□□□□ -1.12
SGIP1-210ENST00000483060 CCDC87Q9NVE4 849 aa8.03□□□□□ -1.12
SGIP1-210ENST00000483060 RAPGEFL1Q9UHV5 662 aa8.03□□□□□ -1.12
SGIP1-210ENST00000483060 MTMR7Q9Y216 660 aa8.03□□□□□ -1.12
SGIP1-210ENST00000483060 B8ZZF3 427 aa8.02□□□□□ -1.13
SGIP1-210ENST00000483060 ZSCAN22P10073 491 aaPredicted RBP8.02□□□□□ -1.13
SGIP1-210ENST00000483060 ITIH2P19823 946 aa8.02□□□□□ -1.13
SGIP1-210ENST00000483060 FKBP4Q02790 459 aaKnown RBP eCLIP8.02□□□□□ -1.13
SGIP1-210ENST00000483060 SYDE1Q6ZW31 735 aaPredicted RBP8.02□□□□□ -1.13
SGIP1-210ENST00000483060 LIN37Q96GY3 246 aaPredicted RBP8.02□□□□□ -1.13
SGIP1-210ENST00000483060 PRDM7Q9NQW5 492 aa8.02□□□□□ -1.13
SGIP1-210ENST00000483060 CTNND2Q9UQB3 1225 aa8.02□□□□□ -1.13
SGIP1-210ENST00000483060 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.01□□□□□ -1.13
SGIP1-210ENST00000483060 ZNF862O60290 1169 aa8.01□□□□□ -1.13
SGIP1-210ENST00000483060 SSFA2P28290 1259 aa8.01□□□□□ -1.13
SGIP1-210ENST00000483060 ZP2Q05996 745 aa8.01□□□□□ -1.13
SGIP1-210ENST00000483060 IKZF1Q13422 519 aa8.01□□□□□ -1.13
SGIP1-210ENST00000483060 SUPT16HQ9Y5B9 1047 aaKnown RBP8.01□□□□□ -1.13
SGIP1-210ENST00000483060 PCDHGC5Q9Y5F6 944 aa8.01□□□□□ -1.13
SGIP1-210ENST00000483060 HCLS1P14317 486 aaPredicted RBP8□□□□□ -1.13
SGIP1-210ENST00000483060 TOP6BLQ8N6T0 577 aa8□□□□□ -1.13
SGIP1-210ENST00000483060 ZC3H12CQ9C0D7 883 aaKnown RBP8□□□□□ -1.13
SGIP1-210ENST00000483060 GTF2IRD1Q9UHL9 959 aa8□□□□□ -1.13
SGIP1-210ENST00000483060 GLI1P08151 1106 aa7.99□□□□□ -1.13
SGIP1-210ENST00000483060 TTLL10Q6ZVT0 673 aa7.99□□□□□ -1.13
SGIP1-210ENST00000483060 SSU72Q9NP77 194 aaKnown RBP7.99□□□□□ -1.13
SGIP1-210ENST00000483060 LMCD1Q9NZU5 365 aa7.99□□□□□ -1.13
SGIP1-210ENST00000483060 IGF2BP3O00425 579 aaKnown RBP eCLIP7.98□□□□□ -1.13
SGIP1-210ENST00000483060 GSTP1P09211 210 aaKnown RBP7.98□□□□□ -1.13
SGIP1-210ENST00000483060 MPZL3Q6UWV2 235 aa7.98□□□□□ -1.13
SGIP1-210ENST00000483060 HEXIM2Q96MH2 286 aaKnown RBP7.98□□□□□ -1.13
SGIP1-210ENST00000483060 NFIBO00712 420 aa7.97□□□□□ -1.13
SGIP1-210ENST00000483060 USPL1Q5W0Q7 1092 aa7.97□□□□□ -1.13
SGIP1-210ENST00000483060 PRPF40BQ6NWY9 871 aaKnown RBP7.97□□□□□ -1.13
SGIP1-210ENST00000483060 PRR23BQ6ZRT6 265 aa7.97□□□□□ -1.13
SGIP1-210ENST00000483060 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.97□□□□□ -1.13
SGIP1-210ENST00000483060 ABCB6Q9NP58 842 aa7.97□□□□□ -1.13
SGIP1-210ENST00000483060 FYB2Q5VWT5 728 aa7.96□□□□□ -1.14
SGIP1-210ENST00000483060 AMIGO3Q86WK7 504 aa7.96□□□□□ -1.14
SGIP1-210ENST00000483060 ISL2Q96A47 359 aa7.96□□□□□ -1.14
SGIP1-210ENST00000483060 KIRREL1Q96J84 757 aa7.96□□□□□ -1.14
SGIP1-210ENST00000483060 NPHS2Q9NP85 383 aa7.96□□□□□ -1.14
SGIP1-210ENST00000483060 NEFMP07197 916 aa7.95□□□□□ -1.14
SGIP1-210ENST00000483060 C1QTNF9P0C862 333 aa7.95□□□□□ -1.14
SGIP1-210ENST00000483060 ECM1Q16610 540 aa7.95□□□□□ -1.14
SGIP1-210ENST00000483060 TMEM67Q5HYA8 995 aa7.95□□□□□ -1.14
SGIP1-210ENST00000483060 CYFIP1Q7L576 1253 aa7.95□□□□□ -1.14
SGIP1-210ENST00000483060 FAM214BQ7L5A3 538 aa7.95□□□□□ -1.14
SGIP1-210ENST00000483060 SPACA3Q8IXA5 215 aa7.95□□□□□ -1.14
SGIP1-210ENST00000483060 RETREG2Q8NC44 543 aa7.95□□□□□ -1.14
SGIP1-210ENST00000483060 FBXO15Q8NCQ5 510 aaPredicted RBP7.95□□□□□ -1.14
SGIP1-210ENST00000483060 RNF214Q8ND24 703 aa7.95□□□□□ -1.14
SGIP1-210ENST00000483060 TMEM238LA0A1B0GVL6 79 aa7.94□□□□□ -1.14
SGIP1-210ENST00000483060 CPNE3O75131 537 aaKnown RBP7.94□□□□□ -1.14
SGIP1-210ENST00000483060 ZNF157P51786 506 aaPredicted RBP7.94□□□□□ -1.14
SGIP1-210ENST00000483060 CLCN7P51798 805 aa7.94□□□□□ -1.14
SGIP1-210ENST00000483060 FAAP100Q0VG06 881 aa7.94□□□□□ -1.14
SGIP1-210ENST00000483060 TRAK1Q9UPV9 953 aa7.94□□□□□ -1.14
SGIP1-210ENST00000483060 FANCIQ9NVI1 1328 aa7.94□□□□□ -1.14
SGIP1-210ENST00000483060 TMEM88BA6NKF7 163 aa7.93□□□□□ -1.14
SGIP1-210ENST00000483060 KRT1P04264 644 aa7.93□□□□□ -1.14
SGIP1-210ENST00000483060 BUD31P41223 144 aaPredicted RBP7.93□□□□□ -1.14
SGIP1-210ENST00000483060 ERVK-24P63145 666 aa7.93□□□□□ -1.14
SGIP1-210ENST00000483060 PPP2R3AQ06190 1150 aa7.93□□□□□ -1.14
SGIP1-210ENST00000483060 KCNB2Q92953 911 aa7.93□□□□□ -1.14
SGIP1-210ENST00000483060 ABL1P00519 1130 aa7.92□□□□□ -1.14
SGIP1-210ENST00000483060 NKPD1Q17RQ9 610 aa7.92□□□□□ -1.14
SGIP1-210ENST00000483060 KRTAP9-3Q9BYQ3 159 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms